GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000584-TA|BGIBMGA000584-PA|IPR002502|N-acetylmuramoyl-L-
alanine amidase, family 2, IPR006619|Animal peptidoglycan recognition
protein PGRP
         (418 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    27   0.95 
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    24   8.9  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 27.1 bits (57), Expect = 0.95
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)

Query: 395 HFDHSGRFKHKTCTQIYAMIESEN 418
           H DH+GR+ H T TQ Y  I   N
Sbjct: 330 HLDHNGRYTHST-TQDYPSISQIN 352


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 23.8 bits (49), Expect = 8.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 110 GFYISHYALSKLTRLDLDIHE 130
           GFY + Y L  L   D+DI E
Sbjct: 42  GFYTAQYILKHLDNSDIDIVE 62


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.136    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,362
Number of Sequences: 2123
Number of extensions: 17099
Number of successful extensions: 38
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 2
length of query: 418
length of database: 516,269
effective HSP length: 66
effective length of query: 352
effective length of database: 376,151
effective search space: 132405152
effective search space used: 132405152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)