BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000582-TA|BGIBMGA000582-PA|IPR010291|Protein of unknown function DUF895, eukaryotic (548 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 3.7 AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 4.9 >AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate receptor protein. Length = 1040 Score = 23.8 bits (49), Expect = 3.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Query: 308 PSKELSGIQLLSATAYQLKKPNQQLLIP 335 P G+Q L A Y L K N Q ++P Sbjct: 136 PVMPQGGVQALEAMLYTLDKLNTQDIVP 163 >AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter transporter-1A protein. Length = 203 Score = 23.4 bits (48), Expect = 4.9 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 6/112 (5%) Query: 141 ICYAPYIGAQFYPAFYTLVPAGV---IVGLGAAPMWTAKATYLTQAGSVYAKL-TDQAVD 196 +CY GA P F TLV AG+ + L M T + + ++ + AV Sbjct: 10 LCYKNGGGAFLIPYFLTLVLAGIPMFFMELALGQMLTVGGLGVFKIAPLFKGIGYAAAVM 69 Query: 197 GIIVRFFGFFFLAWQTAELWGNLISSLVFSSGEH--STNSTVVDTNKTALTC 246 + + LAW + ++ S L + S + +T + V ++ +L+C Sbjct: 70 SCWMNVYYIVILAWAIFYFFMSMRSELPWGSCNNYWNTKNCVNPYDRDSLSC 121 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.324 0.138 0.432 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 143,673 Number of Sequences: 429 Number of extensions: 5918 Number of successful extensions: 9 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 7 Number of HSP's gapped (non-prelim): 2 length of query: 548 length of database: 140,377 effective HSP length: 61 effective length of query: 487 effective length of database: 114,208 effective search space: 55619296 effective search space used: 55619296 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.5 bits) S2: 46 (22.6 bits)
- SilkBase 1999-2023 -