GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000580-TA|BGIBMGA000580-PA|undefined
         (247 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4DW60 Cluster: Putative uncharacterized protein; n=2; ...    33   6.7  

>UniRef50_Q4DW60 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 1142

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 15/32 (46%), Positives = 24/32 (75%)

Query: 213 DIPANKKRIIEVIVICTFVIISILYLIVKDGM 244
           DI    +RI+++I I TF+IISIL+L++  G+
Sbjct: 24  DILLASRRILQIIPILTFIIISILFLLLLLGV 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.319    0.131    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,565,166
Number of Sequences: 1657284
Number of extensions: 4360052
Number of successful extensions: 8694
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8693
Number of HSP's gapped (non-prelim): 1
length of query: 247
length of database: 575,637,011
effective HSP length: 99
effective length of query: 148
effective length of database: 411,565,895
effective search space: 60911752460
effective search space used: 60911752460
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 71 (32.7 bits)