GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000579-TA|BGIBMGA000579-PA|IPR001194|DENN,
IPR005112|dDENN
         (386 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    27   0.30 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    27   0.30 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    26   0.52 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.9  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   6.5  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 57  EKLLNCIANIINSPERDQLHSFLEACRIRPPM 88
           E+LLN   + ++   R ++H FL A    PP+
Sbjct: 346 ERLLNVNLSAVDQKTRQEVHMFLMAIEKNPPI 377


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 57  EKLLNCIANIINSPERDQLHSFLEACRIRPPM 88
           E+LLN   + ++   R ++H FL A    PP+
Sbjct: 346 ERLLNVNLSAVDQKTRQEVHMFLMAIEKNPPI 377


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 165 ANATLFPMSWQHIFIPILPKHLVDY 189
           A+A L P +  HIF+ I+P  L+ +
Sbjct: 49  ASAVLLPFAIYHIFMHIVPTKLISF 73


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 351  KLKQQYRDWAKTVKKEGGAFFKTVKDKVLFNMFMV 385
            +L +QY    +  KK+  A  K ++DK++F   M+
Sbjct: 1198 ELIEQYLHPIEDDKKKVSAELKDLRDKMVFTFLML 1232


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 351  KLKQQYRDWAKTVKKEGGAFFKTVKDKVLFNMFMV 385
            +L +QY    +  KK+  A  K ++DK++F   M+
Sbjct: 1198 ELIEQYLHPIEDDKKKVSAELKDLRDKMVFTFLML 1232


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 110 DSNKLPSIPDNCNLTEYFSAVDTKCMAG 137
           DS KL  IP+N NL +  +    K   G
Sbjct: 51  DSVKLSKIPNNVNLMDVVAREFDKIQVG 78


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.138    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,738
Number of Sequences: 317
Number of extensions: 4258
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 6
length of query: 386
length of database: 114,650
effective HSP length: 58
effective length of query: 328
effective length of database: 96,264
effective search space: 31574592
effective search space used: 31574592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)