Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000579-TA|BGIBMGA000579-PA|IPR001194|DENN,
IPR005112|dDENN
(386 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 62 1e-10
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 29 1.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.6
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 27 3.4
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 27 3.4
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 27 5.9
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 27 5.9
SPBC2G2.09c |crs1|mug17|meiosis specific cyclin Crs1|Schizosacch... 26 7.8
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 62.1 bits (144), Expect = 1e-10
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Query: 67 INSPERDQLHSFLE-ACRIRPPMPGHTLKVIYNAGH-SVFTCQCPDSNKLPSIPDNCNLT 124
+NS + L SF++ C P P L++ N G +++ + P N++P D +L
Sbjct: 404 LNSLKSLNLQSFVKNICCDVPLPPKGLLQLQVNVGPLNLYAFRSP-VNEIPGWND-VDLY 461
Query: 125 EYFSAVDTKCMAGLWAALLHERRVAIVASKPSRLSACVQAANATLFPMSWQHIFIPILPK 184
F A+ + L+ A L E +V ++ L QA L+P++WQ ++IP+LP+
Sbjct: 462 PLFRALSIPNILVLFEAALMEAKVIFLSENLGMLGYASQALLHLLYPLTWQGLYIPVLPR 521
Query: 185 HLVDYMLAPMPFLIGVPRSV--MENVRMSEIGDVVILDVDANELRSPFNDLETLPPELIS 242
L+ AP ++IG M++V + I +V+ D+D N + S F + L L S
Sbjct: 522 RLISCFEAPCSYIIGTLSYFFHMDDVPLDNI-PLVVCDLDKNSV-STFGKIVRLSRSLRS 579
Query: 243 SLKKAL 248
L+ L
Sbjct: 580 KLQAHL 585
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 251 KNALGDAVSRAFLRALVCLIGGYRDAIKIENGQLITF----NPEAFVKTRKNMQPFLRKI 306
++ALGD V + L + +C +++K + +LI+F NP+A ++ ++ P
Sbjct: 494 QHALGDRVCQIILYSSICTSCSINESLKTKLPKLISFGLLLNPDALLRL-VDIGPSPDDT 552
Query: 307 LQSQIFQQFIDERLDL 322
+ SQ F++F E +L
Sbjct: 553 VGSQKFREFWGEVSEL 568
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 269 LIGGYRDAIKIENGQLITFNPEAFVKTRKNMQPFLRKILQSQIFQQ 314
+ GG++ A I + Q+ F P+A + R MQP + Q I Q+
Sbjct: 400 MFGGFQQAAGIPS-QITGFQPQAMMPQRTGMQPQMTGFQQPMIPQR 444
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 252 NALGDAVSRAFLRALVCLIGGYRDAIKIENGQLITFN 288
+A+ +SR F A+VC+ GGY G +ITF+
Sbjct: 325 DAIDIVISRKFSCAVVCVAGGYPG--PYNKGDIITFD 359
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 350 QKLKQQYRDWAKTVKKEGGAFFKTVKDKVL 379
++L++QY D+ K +K++ G FF+ + K L
Sbjct: 477 EELEEQYTDFFKKLKEKYGEFFQNLLKKEL 506
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 26.6 bits (56), Expect = 5.9
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 26 KEPYVLFKYPESYKNEEEIKSIPKFTFPCSLEKLLNCIANIINSPERDQLHSFLEACRIR 85
K PY F S E K S+EK ++ + I+ + +H L A +
Sbjct: 178 KRPYARFAQKVSTPIESHANKSVKLEHKNSIEKKISNVDKPISDLIENDIHESLPALQ-N 236
Query: 86 PPMPGHTLKVIY 97
PP+ H+ +Y
Sbjct: 237 PPIQSHSETDLY 248
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 5.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 43 EIKSIPKFTFPCSLEKLLNCIANIINSPERDQL 75
+++ P+F FPCSL +L+ ++ S + + +
Sbjct: 176 DLRLAPQFPFPCSLHDVLSSYLYLLKSTKPENI 208
>SPBC2G2.09c |crs1|mug17|meiosis specific cyclin
Crs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 229
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 169 LFPMSWQHIFIPILPKHLVDYMLAPMPFLI 198
L P+ +QH+F LP D M+ +L+
Sbjct: 194 LTPLIFQHVFFKSLPSESCDQMMVEWQYLL 223
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.138 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,867,168
Number of Sequences: 5004
Number of extensions: 82355
Number of successful extensions: 214
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 209
Number of HSP's gapped (non-prelim): 9
length of query: 386
length of database: 2,362,478
effective HSP length: 74
effective length of query: 312
effective length of database: 1,992,182
effective search space: 621560784
effective search space used: 621560784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -