Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000579-TA|BGIBMGA000579-PA|IPR001194|DENN,
IPR005112|dDENN
(386 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical pr... 192 3e-49
AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical ... 192 3e-49
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 66 3e-11
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 66 3e-11
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 66 3e-11
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 63 3e-10
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 53 4e-07
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 50 2e-06
Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical p... 31 1.4
Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF043104-1|AAC33846.1| 111|Caenorhabditis elegans sol protein p... 31 1.4
Z98877-1|CAB11569.2| 343|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 31 1.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 31 1.8
AF077541-7|AAC64628.1| 197|Caenorhabditis elegans Hypothetical ... 30 3.2
AC024776-19|AAK68480.2| 398|Caenorhabditis elegans Hypothetical... 30 3.2
Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 192 bits (469), Expect = 3e-49
Identities = 107/300 (35%), Positives = 176/300 (58%), Gaps = 13/300 (4%)
Query: 50 FTFPCSLEKLLNCIANIINSPERDQLHSFL-EACRIRPPMPGHTLKVI---YNAGHS--- 102
F +P K LN I+ +I S +R+ + S L + P L+ GH+
Sbjct: 101 FFWPNVFFKALNDISLVIGSAQREDVESVLTKFYHTDIPNIDEYLRFADSNQTDGHNYRV 160
Query: 103 VFTCQCPDSNKLPSIPDNCNLTEYFSAVDTKCMAGLWAALLHERRVAIVASKPSRLSACV 162
VF + PD +LP++ + E+++A+D + M ++A+LL ERR+ K LS+C+
Sbjct: 161 VFAEKIPDHTRLPTLGSDKFFLEFYNAIDPRQMLAIFASLLKERRILFTGRKVGSLSSCL 220
Query: 163 QAANATLFPMSWQHIFIPILPKHLVDYMLAPMPFLIGVPRSVMENVRMS--EIGDVVILD 220
A + L+PM WQ +FI ILP+ LVD ++APMP+LIGVP++V+EN R++ +IG+VVI+D
Sbjct: 221 HAVSMLLYPMCWQSVFITILPESLVDMVMAPMPYLIGVPKTVLENARLNIRDIGEVVIVD 280
Query: 221 VDANELRSPFNDLETLPPELISSLKKALSDKNALGDAVSRAFLRALVCLIGGYRDAIKIE 280
+D L SPF+D+ +P E+++ LK L ++A+ D ++ FLRA+V L G Y +
Sbjct: 281 IDEKTLTSPFDDVAAMPQEVVNFLKAQLRSQSAMDDTFAKHFLRAMVMLFGDYTSGFTGD 340
Query: 281 NGQLITFNPEAFVKTRK-NMQPFLRKILQS---QIFQQFIDERLDLLNSGRGFNDEFEVE 336
+ + F+ E FV +K + Q ++ +L + Q ++FI +RL+L G D+FE+E
Sbjct: 341 TPETLVFSKERFVVQQKPSYQAYVSSLLGADGVQYLERFIHDRLELYKDGHVPGDQFEIE 400
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 4 RVRETVKFLFELFCEV-SPGDHLKEPYVLFKYPESYKNEEEIKSIPKFTFPCSLEKL 59
R R V L+++FCE+ +P K + +YP+ + + +KS+ +F FPC L ++
Sbjct: 5 RYRADVATLYDVFCELDAPKPGEKLAILRLQYPDDFHDPAIVKSVQQFAFPCQLREV 61
>AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 192 bits (469), Expect = 3e-49
Identities = 107/300 (35%), Positives = 176/300 (58%), Gaps = 13/300 (4%)
Query: 50 FTFPCSLEKLLNCIANIINSPERDQLHSFL-EACRIRPPMPGHTLKVI---YNAGHS--- 102
F +P K LN I+ +I S +R+ + S L + P L+ GH+
Sbjct: 101 FFWPNVFFKALNDISLVIGSAQREDVESVLTKFYHTDIPNIDEYLRFADSNQTDGHNYRV 160
Query: 103 VFTCQCPDSNKLPSIPDNCNLTEYFSAVDTKCMAGLWAALLHERRVAIVASKPSRLSACV 162
VF + PD +LP++ + E+++A+D + M ++A+LL ERR+ K LS+C+
Sbjct: 161 VFAEKIPDHTRLPTLGSDKFFLEFYNAIDPRQMLAIFASLLKERRILFTGRKVGSLSSCL 220
Query: 163 QAANATLFPMSWQHIFIPILPKHLVDYMLAPMPFLIGVPRSVMENVRMS--EIGDVVILD 220
A + L+PM WQ +FI ILP+ LVD ++APMP+LIGVP++V+EN R++ +IG+VVI+D
Sbjct: 221 HAVSMLLYPMCWQSVFITILPESLVDMVMAPMPYLIGVPKTVLENARLNIRDIGEVVIVD 280
Query: 221 VDANELRSPFNDLETLPPELISSLKKALSDKNALGDAVSRAFLRALVCLIGGYRDAIKIE 280
+D L SPF+D+ +P E+++ LK L ++A+ D ++ FLRA+V L G Y +
Sbjct: 281 IDEKTLTSPFDDVAAMPQEVVNFLKAQLRSQSAMDDTFAKHFLRAMVMLFGDYTSGFTGD 340
Query: 281 NGQLITFNPEAFVKTRK-NMQPFLRKILQS---QIFQQFIDERLDLLNSGRGFNDEFEVE 336
+ + F+ E FV +K + Q ++ +L + Q ++FI +RL+L G D+FE+E
Sbjct: 341 TPETLVFSKERFVVQQKPSYQAYVSSLLGADGVQYLERFIHDRLELYKDGHVPGDQFEIE 400
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 4 RVRETVKFLFELFCEV-SPGDHLKEPYVLFKYPESYKNEEEIKSIPKFTFPCSLEKL 59
R R V L+++FCE+ +P K + +YP+ + + +KS+ +F FPC L ++
Sbjct: 5 RYRADVATLYDVFCELDAPKPGEKLAILRLQYPDDFHDPAIVKSVQQFAFPCQLREV 61
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 66.5 bits (155), Expect = 3e-11
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 87 PMPGHT---LKVIYNAGHSVFTCQCPDSNKLPSIPDNCNLTEYFSAVDTKCMAGLWAALL 143
P+PG T ++V+ VF PD + I ++ +D + L AA+L
Sbjct: 222 PVPGKTKVQIEVMPMDLSQVFEFALPDHTRFTLIDFPLHIPFEILGIDM-ALRVLTAAML 280
Query: 144 HERRVAIVASKPSRLSACVQAANATLFPMSWQHIFIPILPKHLVD---YMLAPMPFLIGV 200
E ++ I + + +S C+ + A L+P+ + IP+LP ++ +LAP PFLIGV
Sbjct: 281 -EFKIVIQSRNYNAVSMCILSIVALLYPLEYMFPVIPLLPAYMPSAEQLLLAPTPFLIGV 339
Query: 201 PRSVMENVRMSEI-GDVVILDVDANELRSPFNDL--ETLPPELISSLKKALSDKNAL 254
P S + ++ E+ DV+++D+D N L+ P +DL LP + LK+ L KNA+
Sbjct: 340 PSSFFHHRKIRELPSDVILVDLDTNCLQVP-DDLYIPDLPEPDATHLKERL--KNAI 393
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 66.5 bits (155), Expect = 3e-11
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 87 PMPGHT---LKVIYNAGHSVFTCQCPDSNKLPSIPDNCNLTEYFSAVDTKCMAGLWAALL 143
P+PG T ++V+ VF PD + I ++ +D + L AA+L
Sbjct: 222 PVPGKTKVQIEVMPMDLSQVFEFALPDHTRFTLIDFPLHIPFEILGIDM-ALRVLTAAML 280
Query: 144 HERRVAIVASKPSRLSACVQAANATLFPMSWQHIFIPILPKHLVD---YMLAPMPFLIGV 200
E ++ I + + +S C+ + A L+P+ + IP+LP ++ +LAP PFLIGV
Sbjct: 281 -EFKIVIQSRNYNAVSMCILSIVALLYPLEYMFPVIPLLPAYMPSAEQLLLAPTPFLIGV 339
Query: 201 PRSVMENVRMSEI-GDVVILDVDANELRSPFNDL--ETLPPELISSLKKALSDKNAL 254
P S + ++ E+ DV+++D+D N L+ P +DL LP + LK+ L KNA+
Sbjct: 340 PSSFFHHRKIRELPSDVILVDLDTNCLQVP-DDLYIPDLPEPDATHLKERL--KNAI 393
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 66.5 bits (155), Expect = 3e-11
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 87 PMPGHT---LKVIYNAGHSVFTCQCPDSNKLPSIPDNCNLTEYFSAVDTKCMAGLWAALL 143
P+PG T ++V+ VF PD + I ++ +D + L AA+L
Sbjct: 222 PVPGKTKVQIEVMPMDLSQVFEFALPDHTRFTLIDFPLHIPFEILGIDM-ALRVLTAAML 280
Query: 144 HERRVAIVASKPSRLSACVQAANATLFPMSWQHIFIPILPKHLVD---YMLAPMPFLIGV 200
E ++ I + + +S C+ + A L+P+ + IP+LP ++ +LAP PFLIGV
Sbjct: 281 -EFKIVIQSRNYNAVSMCILSIVALLYPLEYMFPVIPLLPAYMPSAEQLLLAPTPFLIGV 339
Query: 201 PRSVMENVRMSEI-GDVVILDVDANELRSPFNDL--ETLPPELISSLKKALSDKNAL 254
P S + ++ E+ DV+++D+D N L+ P +DL LP + LK+ L KNA+
Sbjct: 340 PSSFFHHRKIRELPSDVILVDLDTNCLQVP-DDLYIPDLPEPDATHLKERL--KNAI 393
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 63.3 bits (147), Expect = 3e-10
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 55 SLEKLLNCIANIINSPERDQL--HSFLEACRIRPPMPGHTLKVIYNAGHSVFTCQCPDSN 112
S LL + II SP L S++ C P+P ++ + + Q P
Sbjct: 213 STRALLTALHQIIASPSSPHLPLESYIYWCLYEVPLPSPSMTLKIPLLGTTLVVQRPGPK 272
Query: 113 KLPSIPDNCNLTEYFSAVDTKCMAGLWAALLHERRVAIVASKPSRLSACVQAANATLFPM 172
+LP D+ + F + + L++ L E ++ + + SRL ++ A FP
Sbjct: 273 ELPFFDDS--IGSIFDYLPVEKFIRLFSCFLLEHQILLCSKDLSRLMTVCESLLALSFPF 330
Query: 173 SWQHIFIPILPKHLVDYMLAPMPFLIG--VPRSVMENVRMSEIGDVVILDVDANELRSP- 229
WQ + P+LP +D+ AP+P+++G +V E + S + VV LD +EL
Sbjct: 331 RWQMTYAPVLPYSKLDFFEAPVPYVMGWYYEDTVPEELFQSNV-CVVDLDTGRSELPEDV 389
Query: 230 --FNDLETLPPELISSLKKALSDKNAL 254
F L ++ +SL++ LSD + +
Sbjct: 390 PVFPGARQLATDIKNSLER-LSDSDKM 415
Score = 36.3 bits (80), Expect = 0.037
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 191 LAPMPFLIGVPRSVMENVRMSEIGDVVILDVDANELRSPFNDLETLPPELISSLKKALSD 250
L P+P L V R+ R++EI + VD + ++S F D + L +
Sbjct: 478 LQPLP-LENVLRNNSTLARVAEIARRAGVVVDVDNIKSEFADAQNLDSPIARHYFVDAKV 536
Query: 251 KNALGDAVSRAFLRALVC----LIGGY----RDAIKIENGQLITFNPEAFVKTRKNMQ-P 301
NA+ + V F+ +IGG R++ + + F+ +F+ + +
Sbjct: 537 NNAIRECVLNRFVEMFYSYEHFVIGGQGCDDRESYEANRESMADFDKASFLSDQPDSHLT 596
Query: 302 FLRKILQSQIFQQFIDERL 320
FL L++Q+F FID ++
Sbjct: 597 FLAAFLETQMFTSFIDSKI 615
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 52.8 bits (121), Expect = 4e-07
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 94 KVIYNAGHSVFTCQCPDSNKLPSIPDNCNLTEYFSAVDTKCMAGLWAALLHERRVAIVAS 153
+V G + D ++LP + L + + ++ + L L E+++ I +
Sbjct: 406 RVFMQLGAENISFDSHDDSQLPL--NGAQLIDTLKYLGSENLMYLMLLALLEQKILIHSL 463
Query: 154 KPSRLSACVQAANATLFPMSWQHIFIPILPKHLVDYMLAPMPFLIGVPRSVMENVRMSEI 213
+P L+A ++ A +FP WQ +IP P L + AP+PF+ GV E +
Sbjct: 464 RPWMLAAVAESVCALMFPFHWQCPYIPQCPLGLAGVLHAPLPFIAGVDSRYFE-LYEDPP 522
Query: 214 GDVVILDVDANEL-----RSPFNDLETLPPELISSLKKALSD 250
DV D+D + + R+ F LP + LK AL D
Sbjct: 523 DDVTCFDLDTSTISFSTVRATFK-TSMLPKKPAKQLKSALED 563
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 141 ALLHERRVAIVASKPSRLSACVQAANATLFPMSWQHIFIPILPKHLVDYMLAPMPFLIGV 200
ALL + R+ + +S RLS C A + L+P + H + ILP L + + +P PFLIGV
Sbjct: 199 ALLSDCRIVLASSSLMRLSRCQNAILSLLYPFEYVHSCVTILPDSLAEVLESPTPFLIGV 258
>Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 46 SIPKFTFPCSLEKLLNCIANIINSPERDQLHSFLEACRIRPPMP 89
S PK ++ + N I++++N+ +R H+F+ A R P+P
Sbjct: 41 SFPKIITD-TVRDVSNAISDLVNNRDRSPAHNFVRATHFRTPLP 83
>Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 46 SIPKFTFPCSLEKLLNCIANIINSPERDQLHSFLEACRIRPPMP 89
S PK ++ + N I++++N+ +R H+F+ A R P+P
Sbjct: 41 SFPKIITD-TVRDVSNAISDLVNNRDRSPAHNFVRATHFRTPLP 83
>AF043104-1|AAC33846.1| 111|Caenorhabditis elegans sol protein
protein.
Length = 111
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 46 SIPKFTFPCSLEKLLNCIANIINSPERDQLHSFLEACRIRPPMP 89
S PK ++ + N I++++N+ +R H+F+ A R P+P
Sbjct: 25 SFPKIITD-TVRDVSNAISDLVNNRDRSPAHNFVRATHFRTPLP 67
>Z98877-1|CAB11569.2| 343|Caenorhabditis elegans Hypothetical
protein Y69H2.1 protein.
Length = 343
Score = 30.7 bits (66), Expect = 1.8
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 160 ACVQAANATLFPMSWQHIFIPILPKHLVDYMLAPMPFLIGVPRSVMENVRMSEIGDVVIL 219
AC Q+A P++ HI + L K L + L + +I ++ IGDV I
Sbjct: 131 ACFQSAGLITVPIAIDHICLVFLKKKLKVFNLVVIQVIITFVELFFTLGHLA-IGDVTIN 189
Query: 220 DVDANELRSP 229
DV A + SP
Sbjct: 190 DVCAQWIASP 199
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 96 IYNAGHSVFTCQCPDSNKLPSIPDNC--NLTEYFSAV---DTKCMAGLW 139
+ AG + +TC CPD L S C N TE A D KC+ LW
Sbjct: 3598 LIGAGGNGYTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIPKLW 3646
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 96 IYNAGHSVFTCQCPDSNKLPSIPDNC--NLTEYFSAV---DTKCMAGLW 139
+ AG + +TC CPD L S C N TE A D KC+ LW
Sbjct: 3598 LIGAGGNGYTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIPKLW 3646
>AF077541-7|AAC64628.1| 197|Caenorhabditis elegans Hypothetical
protein Y23H5A.2 protein.
Length = 197
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 302 FLRKILQSQIFQQFIDERLDLLNSGRGFNDEFEVECNAYADKLNT 346
FLR+ ++++ Q DERLD + R E C A D LNT
Sbjct: 141 FLRESIETR--QSTCDERLDQIEGSRNATAEAAQFCQALRDDLNT 183
>AC024776-19|AAK68480.2| 398|Caenorhabditis elegans Hypothetical
protein Y41D4B.6 protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 224 NELRSPFNDLETLPPELISSLKKALSDKNALGDAVSRAFLRALVCLIGGYRDAI 277
N++R P +P E+ K S+ +ALG+++SR + +L I G R +I
Sbjct: 177 NKIRVPTGTPRQVPKEVSKETKSKESNSDALGNSISR-LISSLKNFISGGRSSI 229
>Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical
protein R07B1.9 protein.
Length = 770
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 318 ERLDLLNSGRGFNDEFEVECNAYADKL 344
E L+ L S GFN+EF+ E + YA ++
Sbjct: 103 ENLNQLQSADGFNEEFQSENSNYAGRI 129
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.138 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,134,387
Number of Sequences: 27539
Number of extensions: 450840
Number of successful extensions: 1026
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 993
Number of HSP's gapped (non-prelim): 28
length of query: 386
length of database: 12,573,161
effective HSP length: 83
effective length of query: 303
effective length of database: 10,287,424
effective search space: 3117089472
effective search space used: 3117089472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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