GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000578-TA|BGIBMGA000578-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (618 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    26   3.4  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   5.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   5.9  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    25   7.8  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    25   7.8  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 553 VFEGVGASLGSFIGGQLYHHYQGWITFRIYGIGSLVCC 590
           +  G+ ASL S   G   +H   W    I  IGS +CC
Sbjct: 302 LINGILASLVSVTAGCYLYH--AWEAILIGAIGSALCC 337


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 85  HNRPKINVELNCGPAGTVLTSCYKDSPSLD 114
           H   K+N +LN G  G    SC ++S S D
Sbjct: 406 HPNCKMNRKLNSGDLGIGADSCRRESESSD 435


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 390 LKTDSTKMSLNILGDVGTLLTSLPTFVFM 418
           +   + ++  N+L D+  LLTS+P  V++
Sbjct: 559 VSVQAIRLDGNLLSDIDGLLTSMPNLVWL 587


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 195 CRIGQNYVDVNEPCSLNCTNENLSSVIGREKANMTCVDRHLNYRLC 240
           C+ G+ YVD+  P  +     N+ +          CV  H N RLC
Sbjct: 106 CQPGE-YVDLARPSMIVKCTRNVCTGRNEVPYREQCVKLHQNNRLC 150


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 248 LTKQNIESDCQADCVLDKKTPWRLMEICEGWHA 280
           L K  ++SD Q  C+++   P     +C   HA
Sbjct: 18  LVKVMVKSDAQVCCMVEHTFPQEPYRVCHEQHA 50


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.140    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,830
Number of Sequences: 2123
Number of extensions: 28354
Number of successful extensions: 125
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 120
Number of HSP's gapped (non-prelim): 7
length of query: 618
length of database: 516,269
effective HSP length: 68
effective length of query: 550
effective length of database: 371,905
effective search space: 204547750
effective search space used: 204547750
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 51 (24.6 bits)