Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000577-TA|BGIBMGA000577-PA|IPR000595|Cyclic
nucleotide-binding, IPR005821|Ion transport
(540 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 50 1e-06
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 33 0.076
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 33 0.10
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 33 0.13
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 31 0.31
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 31 0.31
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.41
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 31 0.41
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 30 0.71
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.71
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 29 1.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 1.6
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 29 1.6
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 29 1.6
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 29 1.6
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 29 2.2
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 29 2.2
SPBC83.04 |apc15||anaphase-promoting complex subunit Apc15 |Schi... 28 2.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 2.9
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 28 3.8
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 28 3.8
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 28 3.8
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 5.0
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 27 5.0
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 27 5.0
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 27 5.0
SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|c... 27 6.6
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 27 6.6
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 27 6.6
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 27 8.7
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 27 8.7
SPBC947.13 |rba50||RNA polymerase II associated protein |Schizos... 27 8.7
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 8.7
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 8.7
SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35 ... 27 8.7
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 27 8.7
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 254 LREVRIFQDCEPGXXXXXXXXXXXQVFSPGDYICRKGDVGKEMYIVKRGRLQVVADDGKT 313
L EV I + V+ G + R+GD+G + Y+++ G +VV +GK
Sbjct: 273 LEEVPILSSLDKYQRQKIADALQTVVYQAGSIVIRQGDIGNQFYLIEDGEAEVV-KNGKG 331
Query: 314 VLATLSAGSVFGEVSVL-EIAGNRTGNRRT 342
V+ TL+ G FGE++++ E N T +T
Sbjct: 332 VVVTLTKGDYFGELALIHETVRNATVQAKT 361
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 33.5 bits (73), Expect = 0.076
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 390 DEALFESAQTTQQSIEETVHKLETT-VEMLNNRL--QGLLADVGEEQAEMKQRMN-NIEV 445
+++L E+ + ++ I E K+ET ++ N RL + L + + E+A +K+ N N E
Sbjct: 1239 NKSLRENLERNEEVITELREKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLENSNEEY 1298
Query: 446 RMLEDEVDELPSDDDVTSSDASELKSEI 473
+ E+ + TSSDAS LK+E+
Sbjct: 1299 KRHNQEILLSLNSSTSTSSDASRLKNEL 1326
Score = 29.1 bits (62), Expect = 1.6
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 383 LRKDGLLDEALFESAQTTQQSIEETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNN 442
L K G+ + ++ +QS+ E KL +M+ +LQ L + E KQR +
Sbjct: 842 LEKSGIEYSSRIKTLMLEKQSLSEDNRKLLDNQQMMEIKLQELNGVIELE----KQRFST 897
Query: 443 IEVRMLEDEVDELPSDDDVTSSDASELKSE 472
+E + + + + + S S+L+S+
Sbjct: 898 LEAKFTQQKNTSYSEREALLESSLSDLQSK 927
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 33.1 bits (72), Expect = 0.10
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 406 ETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSD 465
E + LE +E + L ++ E+++ K+ E+R L++ +DEL + DV
Sbjct: 249 ERIRFLENALEKVQREKDSLSTEMEEDKSN-KEVDYEYEIRQLQNRLDELSEELDVAQDL 307
Query: 466 ASELKSEIA 474
+E + EIA
Sbjct: 308 LTEKEDEIA 316
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 32.7 bits (71), Expect = 0.13
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 393 LFESAQTTQQSIEETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNNIEVRMLEDEV 452
LF SAQ Q ++ETV+KL T+++ NN L + E+ ++ + + + E
Sbjct: 472 LFSSAQEKQLQMKETVNKL-TSLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQ 530
Query: 453 DE-----LPSDDDVTSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQS 499
D L ++ D + +L+S Y E + S+ +SSL SQ+
Sbjct: 531 DSQKLRLLVEQLELERQDLKQAGENHYSNLSSDY-ETQIKSL-ESSLTNSQA 580
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 31.5 bits (68), Expect = 0.31
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 358 KRDLWEALGDYPDARNTLTE--RGCQLLRKDGLLDEALFE-SAQTTQQS---IEETVHKL 411
++ L E + + +A TL++ R Q+ R + ++ A T+Q I++ + K
Sbjct: 76 EKPLDEKVKELENANKTLSDLVRRIQIQRDEAEQKAEIYNRDALNTKQEHLDIKKRLEKS 135
Query: 412 ETTVEML---NNRLQGLLADVGEEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASE 468
+ TV L N LQ +L +VG E E + + + + + + +++S +SE
Sbjct: 136 DETVCKLKEENENLQDMLRNVGNELVESRDEIKELIEKQKVQKESVKSHESELSSVMSSE 195
Query: 469 LKSEIAKDLASGYSEAPMTSVNDSSLV 495
+ + + D A + E P+ S L+
Sbjct: 196 ILPKASSDSAGSF-EPPVISNISKELI 221
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 31.5 bits (68), Expect = 0.31
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Query: 383 LRKDGLLDEALFESAQTTQQSIEETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNN 442
++K+ + + S + +S+ ET + + +E ++ + GEE+ E ++ N
Sbjct: 318 IQKENTVQQEASSSEEEAVKSLPET-QRTTSRIETQEEEIKEEEME-GEEEEEEEEVPNY 375
Query: 443 IEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMP 501
LED+V +L V SS E+ E A G S +P S Q +P
Sbjct: 376 ESENELEDKVGDLSLSLGVASSFVDEMLRERNNLSAEGTSASPSLDKKSESTNIVQPIP 434
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.41
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 393 LFESAQTTQQSIEETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNNIE--VRMLED 450
LF+ A+ T+ S ++T E T E N + LA++ +++ E K + ++ V +E+
Sbjct: 1091 LFQ-AEDTKNSYDQT--SPEATQER-NRTISSKLAEMEKQKNESKAALEQMKNYVTNIEN 1146
Query: 451 EVDE--LPS--DDDVTSSD--ASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMPLRE 504
+ LPS +DD S E + + K+L AP T S QS P+
Sbjct: 1147 NIRAKLLPSAANDDAWLSQNVVDESVTRVVKELPVPAPAAPQTLNPPSVSTVQQSKPIES 1206
Query: 505 RGHSFCVLRTTALLHAPPEPRSKSLRIK 532
H+ V T+ A ++ RIK
Sbjct: 1207 NTHTPEVKATSESPSASSNLEDRAARIK 1234
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 31.1 bits (67), Expect = 0.41
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 453 DELPSDDDVTSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMPLRE 504
D++PS D+ SSD + + ++I++D AP T + A+ M L E
Sbjct: 72 DDIPSTLDLYSSDNAAIDTDISEDETINQRHAPQTDYRYPNTSANPKMGLEE 123
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 30.3 bits (65), Expect = 0.71
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 431 EEQAEMK-QRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDLA 478
E+ AE K N++V+ L+ ++ EL S + + +ELK I + LA
Sbjct: 38 EKPAEEKVAETENVDVKELQSKLSELKSKYEAKDKEVAELKGSIRQSLA 86
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.71
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 393 LFESAQTTQQSI-EETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNNIEVRMLEDE 451
L ESA + + I +E +L++ E L ++ Q+E E+ LE E
Sbjct: 1470 LQESASSDAEQITKEQFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKE 1529
Query: 452 VDELPSDDDVTSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQ 498
+ EL SD + L +E+A ++ + + ++ + + SQ
Sbjct: 1530 IHELRSDKEGLVQQVQNLSAELAALREHSPTQGSLENADEIARLRSQ 1576
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 29.5 bits (63), Expect = 1.2
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 429 VGEEQAEMKQRMNNIEVRMLEDEVDELP--SDDDVTSSDASELKSEIA----KDLASGYS 482
VG E+A +K + V +DE +LP S+ + L+SE+A + + +G+S
Sbjct: 548 VGREEAWLKSMAQELGVESSDDEDPDLPKKSESSKNKKQIAHLRSELAPLLHEKIRTGFS 607
Query: 483 EAPMTS--VNDSSLVASQSM 500
+TS VN + +A++ +
Sbjct: 608 GRYLTSGLVNMAEKLANEEV 627
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 455 LPSDDDVTSSDASELK-SEIAKDLASGYSEAPMTSVNDSSLVASQSMPL 502
L S + T++ AS + + A+ S P+TSVN +S ++ S PL
Sbjct: 343 LSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPL 391
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 455 LPSDDDVTSSDASELK-SEIAKDLASGYSEAPMTSVNDSSLVASQSMPL 502
L S + T++ AS S + A+ S P+TSVN ++ ++ S PL
Sbjct: 441 LSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPL 489
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 455 LPSDDDVTSSDASELK-SEIAKDLASGYSEAPMTSVNDSSLVASQSMPL 502
L S + T++ AS + + A+ S P+TSVN +S ++ S PL
Sbjct: 457 LSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPL 505
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 462 TSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMPL 502
TS+ ++ L S + A+ S P+TSVN ++ ++ S PL
Sbjct: 336 TSTSSTPLSS-VNSTTATSASSTPLTSVNSTTATSASSTPL 375
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 462 TSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMPL 502
TSS +S S A+ S P++SVN ++ ++ S PL
Sbjct: 417 TSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPL 457
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 462 TSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMP 501
TSS +S S A+ S P+TSVN ++ ++ S P
Sbjct: 531 TSSVSSTPLSSANSTTATSASSTPLTSVNSTTATSASSTP 570
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 411 LETTVEMLNNRLQGLLADVGEEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELK 470
L TT +L++ L ++ + E ++ ++++V+ + E+ DDD TS+D LK
Sbjct: 133 LSTTSSLLDDDFARRLEEIDRQVQEFEKSSSDMDVQ-IHTHKREIEEDDDNTSADVPLLK 191
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 390 DEALFESAQTTQQSIEETVHKLET-TVEMLNNRLQGLLA----DVGEEQAEMKQRMN 441
D + Q Q +E VH + ++++N+R QG LA D GE + E+++++N
Sbjct: 215 DTRFVQCPQGEIQKRKEVVHTVSLHDIDVINSRTQGFLALFSGDTGEIKPEVREQIN 271
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 29.1 bits (62), Expect = 1.6
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 367 DYPDARNT-LTERGCQLLRKDGLLDEALFESAQTTQQSIEETVHKLETTVEMLNNRLQ-- 423
DY + R L E Q L +DG L+ + + ++E+++ + + L+ ++
Sbjct: 801 DYSNLRREKLKELRRQKLLEDGNLNVLEGDKRKAFLATVEDSLVSSKDNLTWLDATVEDS 860
Query: 424 GL-LADVGEEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDLASGYS 482
G+ +D+G+E +Q +N+ E +E+E+ E+ S D LK + + S
Sbjct: 861 GVGSSDLGDEYLYSEQSLNHEEEEQMEEELSEIFSSGGPNVVDRVYLKKSSTRHTSDNNS 920
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 458 DDDVTSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMPLRERGHS 508
D+ +++ +A E KS KD S P + S S+S PL ++G++
Sbjct: 10 DESISTKNALEEKSNETKDETSKRKHDPAEEESAVSTKVSKSEPLEDKGNA 60
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1220
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 302 GRLQVVADDGKTVLATLSAGSVFGEVSVLEIAGNRTGN 339
G ++VV TV TL++GS F ++ + +G+ +GN
Sbjct: 892 GTVEVVEPAAGTVTGTLTSGSQFFTTTIAQASGSVSGN 929
>SPBC83.04 |apc15||anaphase-promoting complex subunit Apc15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 136
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 432 EQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAK 475
E+ EM M+ + + +++E+ D D+T++DASE +I++
Sbjct: 89 EEGEMDD-MDGDNEEVEDHDIEEVDLDADITNADASEFYEDISE 131
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 457 SDDDVTSSDASELKSEIAKDLASGYSEAPMTSVN--DSSLVAS 497
S T S +SE+ SE++ L SG S P TS + SS+++S
Sbjct: 491 SSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSIISS 533
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 27.9 bits (59), Expect = 3.8
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 9/125 (7%)
Query: 367 DYPDARNTLTERGCQLLRKDGLLDEALFESAQTTQQSIEETVHKLETTVEMLNNRLQGLL 426
D D + T C+ + D ++ ALF+ + T+ SIE H+ N L+ L
Sbjct: 75 DEEDDLDITTLFRCRCMIFDAKINPALFDLSSTSSGSIEHVDHQ--------NISLEASL 126
Query: 427 ADVGEEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDLASGYSEAPM 486
A+ EE+ + + + R L D+ D SD + +S L + K L +
Sbjct: 127 AE-EEERKKGDAKKSEATGRQLFDDDDFDESDAEDSSKATITLDLQKDKSLRKSIIDLKS 185
Query: 487 TSVND 491
++D
Sbjct: 186 VDIDD 190
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 27.9 bits (59), Expect = 3.8
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 443 IEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMPL 502
+E + D ++PSD+DV + + +E + I L++ S S++ +S S+S
Sbjct: 130 VETHLNPDTDPDIPSDEDVLTDEDTEEVASIQPALSTSVS-----SLSLASTAMSKSASA 184
Query: 503 RERGHSFCVLRTTALLHAPPEPRSKSLRIKRIQNESS 539
E S + L +P SK + + +S
Sbjct: 185 SEFSGSSVTKASKKLTSSPTSVASKKATLSSVSKVAS 221
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 27.9 bits (59), Expect = 3.8
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 367 DYPDARNTLTERGCQLLRKDGL-LDEALFESAQTTQQSIEETVHKLETTVEMLNNRLQGL 425
DY ++ T E G +L K+ L EAL + + T+ +EE E+L N L
Sbjct: 467 DYLTSQITNLEEGMVMLNKENTKLSEAL-SNHRVTRSEMEE-------ATEILKNNSADL 518
Query: 426 LADVGEEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDL 477
A + ++ E++ R+ E+ +L+ + ++ + L E+ K L
Sbjct: 519 KAQLEKQPQELENRLLQ-EISILKQRNQKFLKNNATSIQQIQYLDEELGKTL 569
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 445 VRMLEDEVDELPSDDDVTSSDASELKSEIAK 475
+RM+EDE+ E + +V S + EL+ +I+K
Sbjct: 523 LRMVEDELHEAINSKNVQQSRSEELEQQISK 553
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 395 ESAQTTQQSIEETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNNIEVRMLEDEVDE 454
E A+ + E +V L+ V L + + G++ + +E A++ +NN + + D+V +
Sbjct: 46 EIAKELESKYEVSVLPLKLDVSDLKS-IPGVIESLPKEFADIDVLINNAGLALGTDKVID 104
Query: 455 LPSDDDVT 462
L DD VT
Sbjct: 105 LNIDDAVT 112
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/73 (20%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 401 QQSIEETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNNIEVRMLEDEV--DELPSD 458
Q+ + +++ ++ RLQ + + EE +KQ++ ++ + + V + L S
Sbjct: 337 QEGASLAMQRVQNKHDLEKKRLQSAIQPLQEENNSLKQQIEQLQRELASETVVKENLKSS 396
Query: 459 DDVTSSDASELKS 471
D S++ +L+S
Sbjct: 397 LDQQSANVQKLES 409
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 422 LQGLLADVGEEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDL 477
L+G D+ + E+ + + +++ +LPS ++SS ++L + D+
Sbjct: 657 LKGASVDISSKDKEIISQKKQLSPKLIPSTPYDLPSSSQISSSALAQLPPSMQSDI 712
>SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 11 HYLKSSSWKYDLLSLIPTDIAYYW 34
H KS WK +LL L+ T YW
Sbjct: 253 HIEKSMGWKKELLGLVQTLYKEYW 276
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 281 SPGDYICRKGDVGKEMYIVKRGRLQVVADDGKTVLATLSAGSVFGEVSVLEIAGNRTGNR 340
+P + K D +Y+V GRL+ + D+ + + + +G+ + NR
Sbjct: 662 NPDQVVYEKNDPSDCVYVVLNGRLRSIEDERGSARTQVDYFNEYGKGDSVGELEMLLNNR 721
Query: 341 RTANVRALGYSDL 353
R++ + A+ S+L
Sbjct: 722 RSSTLFAIRDSEL 734
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 114 VYNLTGSRNGS-----LTHQYIYSFYWSTLTLTTIGETP 147
++N G RN S LT I FYWS+L + G P
Sbjct: 342 IFNTLGERNSSSKLTNLTEDDIELFYWSSLAESNSGFAP 380
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 26.6 bits (56), Expect = 8.7
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 398 QTTQQSIEETVHKLETTVEMLNNRLQGLLADVGEEQAEMKQRMNNIEVRMLEDEVDELPS 457
Q IE+ +T+++L N+L L A E +M+++ +R+L ++ +E
Sbjct: 326 QRKAAEIEKDYSDQASTLQVLENQLTSLSAAEKEFLKDMQEKEQLKGLRLLPEDKEEY-- 383
Query: 458 DDDVTSSDASELKSEIAKDLASGYSEAPMTSVNDSSLVA 496
+ S+A +L S + L + +TS + SL +
Sbjct: 384 --EGLRSEADKLNSNLLFKLQTLNRNIKVTSQSKDSLTS 420
>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 757
Score = 26.6 bits (56), Expect = 8.7
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 332 IAGNRTGNRRTANVRALGYSDLFCLAKRDLWEALGDYPDARNTLTERGCQLLRKDGLLDE 391
++G R+G T +++L Y+ +F A D + + R+ + L K G +D
Sbjct: 660 LSGLRSGIANTLILKSLSYASVFNEATADSHDESQGAENIRDWHIDERMYRLNKTGRIDF 719
Query: 392 ALFESAQTTQQS 403
L E A T S
Sbjct: 720 MLQEGALDTSYS 731
>SPBC947.13 |rba50||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 423 QGLLADVG--EEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDLASG 480
+G L D G EE +RMN++E+ ++E+ DD + K + ++LA
Sbjct: 72 KGNLDDQGIDEENRVRLERMNDLEIEGAQEEIRATIRDDLLEMLKKRAFKKKAERELAQR 131
Query: 481 YSEAPMTSVNDSS 493
+ + D S
Sbjct: 132 KDRSSQVNTPDLS 144
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 464 SDASELKSEIAKDLASGYSEAPMTSVNDSSLVASQSMPLRERG 506
S A +S+ L +G S+ P+T V++S + QS+P E+G
Sbjct: 275 STADLTESDNICGLTAGKSD-PVTDVDESQTIDEQSIPEAEKG 316
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.6 bits (56), Expect = 8.7
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 369 PDARNTLTERGCQLLR--KDGLLDEA--LFESAQTTQQSIEETVHKLETTVEMLNNRLQG 424
PD L + C LR ++ DE L T Q +E + +TT +L+
Sbjct: 320 PDKAIDLVDEACSSLRLQQESKPDELRRLDRQIMTIQIELESLRKETDTTSVERREKLES 379
Query: 425 LLADVGEEQAEMKQRMNNIEVRMLEDEVDELPSD 458
L D+ EEQ ++ E R L D + + ++
Sbjct: 380 KLTDLKEEQDKLSAAWE--EERKLLDSIKKAKTE 411
>SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 315
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 435 EMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAK--DLASG 480
E+ R N DE +L D+++ SS SE+ + + DL++G
Sbjct: 248 ELNMRQNATHFHKTSDEHKDLNEDEELISSSPSEVGKRVFRLIDLSTG 295
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 26.6 bits (56), Expect = 8.7
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 366 GDYPDARNTLTERGCQLLRKDG---LLDEALFESAQTTQQSIEETVHKL-ETTVEMLNNR 421
G++ + + + G ++++G L+ + FESA SI + TV ML
Sbjct: 251 GEWLKPGSVVVDVGINAVQRNGKRVLVGDVHFESASKVASSITPVPGGVGPMTVAMLMEN 310
Query: 422 LQGLLADVGEEQAEMKQRMNNIEVRMLEDEVDELPSDDDVTSSDASELKSEIAKDL 477
+ E K +N +E++ +PSD ++ +S +L S +AK++
Sbjct: 311 IVNAAKIARTENIYRKIDLNPLELKK------PVPSDIEIANSQEPKLISNLAKEM 360
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,323,814
Number of Sequences: 5004
Number of extensions: 93616
Number of successful extensions: 387
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 351
Number of HSP's gapped (non-prelim): 54
length of query: 540
length of database: 2,362,478
effective HSP length: 76
effective length of query: 464
effective length of database: 1,982,174
effective search space: 919728736
effective search space used: 919728736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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