Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000576-TA|BGIBMGA000576-PA|undefined
         (51 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   0.71 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    19   2.9  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 0.71
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 4   KILCWVLGERFRERRETIVLMTPLMMELFGEEYQRNIRGEYGD 46
           +I  W    R R R++     TPL+     E Y    +G   D
Sbjct: 263 RIQVWFSNRRARLRKQITSAATPLVRSYAPERYPPLAQGVNDD 305


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 3   TKILCWVLGERFRER 17
           T  LC+ L E+F ER
Sbjct: 305 TVFLCYKLMEKFPER 319


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.144    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,991
Number of Sequences: 317
Number of extensions: 282
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 51
length of database: 114,650
effective HSP length: 32
effective length of query: 19
effective length of database: 104,506
effective search space:  1985614
effective search space used:  1985614
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.8 bits)
S2: 34 (17.8 bits)