GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000575-TA|BGIBMGA000575-PA|undefined
         (105 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34897-1|CAA84380.1|  487|Homo sapiens Human histamine H1 recept...    28   5.9  
X76786-1|CAA54182.1|  487|Homo sapiens histamine H1 receptor pro...    28   5.9  
D28481-1|BAA05840.1|  487|Homo sapiens histamine H1 receptor pro...    28   5.9  
D14436-1|BAA03319.1|  487|Homo sapiens histamine H1 receptor pro...    28   5.9  
BC060802-1|AAH60802.1|  487|Homo sapiens histamine receptor H1 p...    28   5.9  
AY136743-1|AAN01269.1|  487|Homo sapiens histamine receptor H1 p...    28   5.9  
AF026261-1|AAB95156.1|  487|Homo sapiens histamine H1 receptor p...    28   5.9  
AB041380-1|BAA94465.1|  487|Homo sapiens histamine H1 receptor p...    28   5.9  

>Z34897-1|CAA84380.1|  487|Homo sapiens Human histamine H1 receptor
           protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 7   AAARGNSRQ--SMNKPNTPANMSDNQLNTHGSSKI 39
           AAA G+SR   ++N+ +      +  LNTHG+S+I
Sbjct: 312 AAAEGSSRDYVAVNRSHGQLKTDEQGLNTHGASEI 346


>X76786-1|CAA54182.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 7   AAARGNSRQ--SMNKPNTPANMSDNQLNTHGSSKI 39
           AAA G+SR   ++N+ +      +  LNTHG+S+I
Sbjct: 312 AAAEGSSRDYVAVNRSHGQLKTDEQGLNTHGASEI 346


>D28481-1|BAA05840.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 7   AAARGNSRQ--SMNKPNTPANMSDNQLNTHGSSKI 39
           AAA G+SR   ++N+ +      +  LNTHG+S+I
Sbjct: 312 AAAEGSSRDYVAVNRSHGQLKTDEQGLNTHGASEI 346


>D14436-1|BAA03319.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 7   AAARGNSRQ--SMNKPNTPANMSDNQLNTHGSSKI 39
           AAA G+SR   ++N+ +      +  LNTHG+S+I
Sbjct: 312 AAAEGSSRDYVAVNRSHGQLKTDEQGLNTHGASEI 346


>BC060802-1|AAH60802.1|  487|Homo sapiens histamine receptor H1
           protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 7   AAARGNSRQ--SMNKPNTPANMSDNQLNTHGSSKI 39
           AAA G+SR   ++N+ +      +  LNTHG+S+I
Sbjct: 312 AAAEGSSRDYVAVNRSHGQLKTDEQGLNTHGASEI 346


>AY136743-1|AAN01269.1|  487|Homo sapiens histamine receptor H1
           protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 7   AAARGNSRQ--SMNKPNTPANMSDNQLNTHGSSKI 39
           AAA G+SR   ++N+ +      +  LNTHG+S+I
Sbjct: 312 AAAEGSSRDYVAVNRSHGQLKTDEQGLNTHGASEI 346


>AF026261-1|AAB95156.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 7   AAARGNSRQ--SMNKPNTPANMSDNQLNTHGSSKI 39
           AAA G+SR   ++N+ +      +  LNTHG+S+I
Sbjct: 312 AAAEGSSRDYVAVNRSHGQLKTDEQGLNTHGASEI 346


>AB041380-1|BAA94465.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 7   AAARGNSRQ--SMNKPNTPANMSDNQLNTHGSSKI 39
           AAA G+SR   ++N+ +      +  LNTHG+S+I
Sbjct: 312 AAAEGSSRDYVAVNRSHGQLKTDEQGLNTHGASEI 346


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.306    0.119    0.327 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,401,300
Number of Sequences: 224733
Number of extensions: 252657
Number of successful extensions: 539
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 539
Number of HSP's gapped (non-prelim): 8
length of query: 105
length of database: 73,234,838
effective HSP length: 79
effective length of query: 26
effective length of database: 55,480,931
effective search space: 1442504206
effective search space used: 1442504206
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 58 (27.5 bits)