BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000575-TA|BGIBMGA000575-PA|undefined
(105 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54666-1|CAA38477.1| 728|Drosophila melanogaster BRcore-TNT1-Q1... 27 3.5
X54663-1|CAA38474.1| 663|Drosophila melanogaster BRcore-Q1-Z1 p... 27 3.5
AY118688-1|AAM50548.1| 709|Drosophila melanogaster AT15442p pro... 27 3.5
AL009146-4|CAA15629.1| 710|Drosophila melanogaster EG:17A9.1,FB... 27 3.5
AE014298-3210|AAF50936.1| 709|Drosophila melanogaster CG12446-P... 27 3.5
AE014298-238|AAN09054.1| 663|Drosophila melanogaster CG11491-PG... 27 3.5
AE014298-237|AAF45648.1| 724|Drosophila melanogaster CG11491-PE... 27 3.5
AY069394-1|AAL39539.1| 299|Drosophila melanogaster LD10005p pro... 27 6.2
AY058461-1|AAL13690.1| 432|Drosophila melanogaster GH26069p pro... 27 6.2
AF218585-1|AAF26736.1| 299|Drosophila melanogaster tantalus pro... 27 6.2
AE014298-2235|AAF48520.1| 432|Drosophila melanogaster CG8509-PA... 27 6.2
AE014296-1053|AAF50710.2| 299|Drosophila melanogaster CG6586-PA... 27 6.2
>X54666-1|CAA38477.1| 728|Drosophila melanogaster BRcore-TNT1-Q1-Z1
protein.
Length = 728
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 1 MWAYIIAAARGNSRQSMNKPNTPANMSDNQLNTHG 35
M+A ++AAA S + N+ N S++ LNT G
Sbjct: 591 MYAAVMAAAASASASTSGSANSSLNNSNSTLNTSG 625
>X54663-1|CAA38474.1| 663|Drosophila melanogaster BRcore-Q1-Z1
protein.
Length = 663
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 1 MWAYIIAAARGNSRQSMNKPNTPANMSDNQLNTHG 35
M+A ++AAA S + N+ N S++ LNT G
Sbjct: 526 MYAAVMAAAASASASTSGSANSSLNNSNSTLNTSG 560
>AY118688-1|AAM50548.1| 709|Drosophila melanogaster AT15442p
protein.
Length = 709
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 78 IHIAPDDKEPQNQVVEHYGESSR 100
+H+ PDD EP +V+H SS+
Sbjct: 392 VHVLPDDHEPLASMVKHRSYSSQ 414
>AL009146-4|CAA15629.1| 710|Drosophila melanogaster
EG:17A9.1,FBgn0000210;br protein.
Length = 710
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 1 MWAYIIAAARGNSRQSMNKPNTPANMSDNQLNTHG 35
M+A ++AAA S + N+ N S++ LNT G
Sbjct: 573 MYAAVMAAAASASASTSGSANSSLNNSNSTLNTSG 607
>AE014298-3210|AAF50936.1| 709|Drosophila melanogaster CG12446-PA
protein.
Length = 709
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 78 IHIAPDDKEPQNQVVEHYGESSR 100
+H+ PDD EP +V+H SS+
Sbjct: 392 VHVLPDDHEPLASMVKHRSYSSQ 414
>AE014298-238|AAN09054.1| 663|Drosophila melanogaster CG11491-PG,
isoform G protein.
Length = 663
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 1 MWAYIIAAARGNSRQSMNKPNTPANMSDNQLNTHG 35
M+A ++AAA S + N+ N S++ LNT G
Sbjct: 526 MYAAVMAAAASASASTSGSANSSLNNSNSTLNTSG 560
>AE014298-237|AAF45648.1| 724|Drosophila melanogaster CG11491-PE,
isoform E protein.
Length = 724
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 1 MWAYIIAAARGNSRQSMNKPNTPANMSDNQLNTHG 35
M+A ++AAA S + N+ N S++ LNT G
Sbjct: 587 MYAAVMAAAASASASTSGSANSSLNNSNSTLNTSG 621
>AY069394-1|AAL39539.1| 299|Drosophila melanogaster LD10005p
protein.
Length = 299
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 8 AARGNSRQSMNKPNTPANMSDNQLNTHGSSKIFTM 42
A G S +++N P T M D QL T S F M
Sbjct: 259 AEAGGSAEAVNIPKTSMTMEDIQLPTMSSQHQFLM 293
>AY058461-1|AAL13690.1| 432|Drosophila melanogaster GH26069p
protein.
Length = 432
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 74 AHSSIHIAPDDKEPQNQVVEHYGES 98
AH H+ D+KE ++++ + YGE+
Sbjct: 335 AHLGTHLIVDEKENEDELEQKYGEN 359
>AF218585-1|AAF26736.1| 299|Drosophila melanogaster tantalus
protein.
Length = 299
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 8 AARGNSRQSMNKPNTPANMSDNQLNTHGSSKIFTM 42
A G S +++N P T M D QL T S F M
Sbjct: 259 AEAGGSAEAVNIPKTSMTMEDIQLPTMSSQHQFLM 293
>AE014298-2235|AAF48520.1| 432|Drosophila melanogaster CG8509-PA
protein.
Length = 432
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 74 AHSSIHIAPDDKEPQNQVVEHYGES 98
AH H+ D+KE ++++ + YGE+
Sbjct: 335 AHLGTHLIVDEKENEDELEQKYGEN 359
>AE014296-1053|AAF50710.2| 299|Drosophila melanogaster CG6586-PA
protein.
Length = 299
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 8 AARGNSRQSMNKPNTPANMSDNQLNTHGSSKIFTM 42
A G S +++N P T M D QL T S F M
Sbjct: 259 AEAGGSAEAVNIPKTSMTMEDIQLPTMSSQHQFLM 293
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.306 0.119 0.327
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,191,072
Number of Sequences: 52641
Number of extensions: 104237
Number of successful extensions: 379
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 367
Number of HSP's gapped (non-prelim): 12
length of query: 105
length of database: 24,830,863
effective HSP length: 74
effective length of query: 31
effective length of database: 20,935,429
effective search space: 648998299
effective search space used: 648998299
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -