GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000574-TA|BGIBMGA000574-PA|IPR002110|Ankyrin
         (218 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   3.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.6  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 101 MDTSLSPGSYRKKEGFLRIGSLNVRV----KKTTEAFSNFLGVG 140
           +D +L  G Y K+EG L    + V++    K TT A  +   VG
Sbjct: 312 IDGALEAGPYSKEEGLLSYPEVCVKLANPQKLTTAAGKHLRKVG 355


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 98  LVHMDTSLSPGSYRKK 113
           L+H+  SLSPG Y ++
Sbjct: 188 LLHVSDSLSPGIYSEQ 203


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 95  RQYLVHMDTSLSPGSY 110
           +Q+L H    LSPG Y
Sbjct: 114 QQHLYHPQVLLSPGGY 129


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query: 47  TCRRRWKQNGGYTPL 61
           +C R W+  GGY  L
Sbjct: 169 SCNRYWQCQGGYPRL 183


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,570
Number of Sequences: 317
Number of extensions: 2039
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 218
length of database: 114,650
effective HSP length: 54
effective length of query: 164
effective length of database: 97,532
effective search space: 15995248
effective search space used: 15995248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)