GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000573-TA|BGIBMGA000573-PA|undefined
         (263 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.8  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         23   6.8  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 2    SAPTELSFDEILKFMLAHNGKVTNHELV 29
            +AP  ++ D ++ F  + +GKV    LV
Sbjct: 1962 NAPERVNMDRVVHFTYSSHGKVMREALV 1989


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 69  ILKKKYMPNNGKDMEEVSETKAESPHVG-SLDTQLE 103
           +  +K  P NG D  E  E+  ES   G SLD QLE
Sbjct: 61  VYPEKDTPANG-DETEAEESGGESGPTGQSLDPQLE 95


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.125    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,638
Number of Sequences: 2123
Number of extensions: 6652
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 2
length of query: 263
length of database: 516,269
effective HSP length: 63
effective length of query: 200
effective length of database: 382,520
effective search space: 76504000
effective search space used: 76504000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)