Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000572-TA|BGIBMGA000572-PA|IPR000577|Carbohydrate
kinase, FGGY, IPR005999|Glycerol kinase
         (431 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   5.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   6.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.7  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   8.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.7  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 290 WRQDARGVICGITEDTNSNHIV-KAALEAVCFQVRD 324
           +R D  GVI  +TEDT    +  K ++  + F  +D
Sbjct: 231 FRTDTAGVIKKLTEDTQERRLSNKGSISKLQFHNKD 266


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 193 GGKHVTDVTNASRTMLMNI 211
           GGK +T ++  S TM +NI
Sbjct: 325 GGKTLTSISVESNTMFINI 343


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 71  ENLVALGGNPEDIIAVGVT 89
           EN+   GGNP+ I  +G++
Sbjct: 191 ENIEWFGGNPKRITLIGLS 209


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 71 ENLVALGGNPEDIIAVGVT 89
          EN+   GGNP+ I  +G++
Sbjct: 62 ENIEWFGGNPKRITLIGLS 80


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 71  ENLVALGGNPEDIIAVGVT 89
           EN+   GGNP+ I  +G++
Sbjct: 191 ENIEWFGGNPKRITLIGLS 209


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.134    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,167
Number of Sequences: 429
Number of extensions: 5044
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 5
length of query: 431
length of database: 140,377
effective HSP length: 60
effective length of query: 371
effective length of database: 114,637
effective search space: 42530327
effective search space used: 42530327
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)