GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000572-TA|BGIBMGA000572-PA|IPR000577|Carbohydrate
kinase, FGGY, IPR005999|Glycerol kinase
         (431 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...   275   1e-75

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score =  275 bits (675), Expect = 1e-75
 Identities = 122/231 (52%), Positives = 165/231 (71%), Gaps = 2/231 (0%)

Query: 10  LVGAIDEGTSSARFIIFKANSSDVVAYHQKELEQHFPQEGWVEQDPYAILAVVKTCIEKA 69
           L+G ID GT+S RF+IFK    + +A HQ  + Q  P++GW E +P  +L  V+ C  +A
Sbjct: 9   LIGVIDAGTNSVRFVIFKLPEFEEIASHQIRITQIVPRDGWTEHNPVEVLEAVRLCAVEA 68

Query: 70  VENLVALGGNPEDIIAVGVTNQRETTIVWEQGTGKPLYNAIVWLDMRTSSTIDKLLDTVP 129
              +  LG   +DI A+G+TNQRETT+VW++ TG+PLYNAIVW D+RT  T+D++L  +P
Sbjct: 69  CHQVEKLGFLVKDIAAIGITNQRETTVVWDKNTGEPLYNAIVWNDIRTDKTVDRVLARLP 128

Query: 130 NETRNKNYLKPLCGLPLSPYFSAVKLRWLSDNVDPVKNAMKKGTCRFGTVDCWIIWNLTG 189
            +  N N+ + L GLP+SPYFSA+KL WL DNV  V+ A ++  C  GT+D W++WNLTG
Sbjct: 129 EQ--NHNHFRALSGLPISPYFSALKLNWLKDNVVAVRKACRERRCYAGTIDTWLVWNLTG 186

Query: 190 GPNGGKHVTDVTNASRTMLMNIENLNWDPLLLRFFEVPKSVLPDIKSSSEV 240
           GP GG  VTDVTNASRT+LMNIE L+WDPLL + F V   +LP+I+SSSE+
Sbjct: 187 GPQGGAFVTDVTNASRTLLMNIETLHWDPLLTKTFSVHPDMLPEIRSSSEI 237



 Score =  210 bits (513), Expect = 6e-56
 Identities = 99/212 (46%), Positives = 139/212 (65%), Gaps = 7/212 (3%)

Query: 224 FEVPKSVLPDIKSSSEVAVAGAALGWLKENIGLLDTAKESQTIAETATENGSVVFVPAFS 283
           +++ ++  P       VAVAG A+ WL++N+ ++   K+S+ IA + +  G V FVPAF+
Sbjct: 305 YQMGRNAPPIYALEGSVAVAGVAMNWLRDNLKIIKDIKDSEEIAGSVSSTGDVYFVPAFT 364

Query: 284 GLYAPYWRQDARGVICGITEDTNSNHIVKAALEAVCFQVRDILDAMNEDCGIPLQVLKVD 343
           GLYAPYWR+DARG+ CG+T  T  +H V+AALEAVCFQ RDI++AM +DCGI L  L  D
Sbjct: 365 GLYAPYWRKDARGIFCGLTSFTTKHHFVRAALEAVCFQTRDIIEAMKKDCGINLNKLHTD 424

Query: 344 GGMTGNQLLMQMQADLVGIEVIKAGFSESTALGAAMVA-------YWGVKTDIQGVPIPM 396
           G M  N LLMQ+QADL GI V++    E  ALG AM A        + ++ +I+G     
Sbjct: 425 GIMASNSLLMQLQADLSGIPVLRTEVHEPAALGTAMAAAQANGVDLYKLEAEIRGYAGVQ 484

Query: 397 TSGNTYAPKISDDERDMRYKQWKMAVERSLGW 428
           +   T+ P  +++ER+ RY +WKMAV+RSLGW
Sbjct: 485 SHHETFLPTTTEEERNARYTKWKMAVQRSLGW 516


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,457
Number of Sequences: 2123
Number of extensions: 18173
Number of successful extensions: 68
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63
Number of HSP's gapped (non-prelim): 3
length of query: 431
length of database: 516,269
effective HSP length: 66
effective length of query: 365
effective length of database: 376,151
effective search space: 137295115
effective search space used: 137295115
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)