Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000570-TA|BGIBMGA000570-PA|IPR001452|Src homology-3,
IPR006020|Phosphotyrosine interaction region
(422 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 39 0.002
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 38 0.002
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 36 0.014
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 33 0.057
SPCC24B10.13 |skb5||Shk1 kinase binding protein 5|Schizosaccharo... 31 0.23
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 29 0.93
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 28 2.8
SPBC800.12c |||ubiquitin family protein, unknown|Schizosaccharom... 28 2.8
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 27 3.8
SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces ... 27 3.8
SPCC576.02 |||hydantoin racemase family |Schizosaccharomyces pom... 27 6.6
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 26 8.7
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 26 8.7
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 190 QQNGNMTTVPHSQLEMLEATHRGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLR 249
Q G++ H+Q A ++ ++P +EIE+ + I + + +D W G N +
Sbjct: 712 QVGGDVKATEHTQPTKTPAIV--IYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSK 769
Query: 250 TGQQGIFPSAY 260
GQQG+FPS Y
Sbjct: 770 -GQQGLFPSNY 779
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 177 IDTGPKSLSPIPLQQNGNMTTVPHSQLEMLEATHRGLHKFNPRHHDEIEVEIGDPIYVQK 236
+ P ++S P + + P + + + R + F P +E++++ GD + V K
Sbjct: 394 VSPSPSNISDAPPSKLNRSYSSPLASISSRKVV-RMKYSFEPETENELKLKKGDLLLVLK 452
Query: 237 EAEDLWCEGVNLR-----TGQQGIFPSAYAV 262
E ++ W G L TG G+FPS Y V
Sbjct: 453 EIDEGWWVGEKLGEDGVFTGNTGMFPSNYCV 483
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 35.5 bits (78), Expect = 0.014
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 211 RGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEG--VNLRTGQQGIFPSAYAVDMDY 266
R L+ + EI++ + D + V +D W +G V+ G+ G+FPS Y +++Y
Sbjct: 358 RALYAYKATLPSEIDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSNYIEELEY 415
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 33.5 bits (73), Expect = 0.057
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 213 LHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEG--VNLRTGQQGIFPSAY 260
L+ + + +EI + GD + V + ED W +G +N+ ++G+FPS +
Sbjct: 874 LYDYQAQIPEEISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPSNF 923
>SPCC24B10.13 |skb5||Shk1 kinase binding protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 140
Score = 31.5 bits (68), Expect = 0.23
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 196 TTVPHSQLEMLEATHRGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGI 255
+T P + +L A L+ F P H +E+ G + + E+ D W + +G+ G+
Sbjct: 72 STHPSASFNVL-ADAVALYDFEPLHDNELGFTTGQRLCILSESSDGWLIAYDDASGRSGL 130
Query: 256 FPSAY 260
P +
Sbjct: 131 VPETF 135
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 29.5 bits (63), Expect = 0.93
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 211 RGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVDMDYNDFD 270
R L+ + +++ GD I + W G ++ T QGIFPS + +D
Sbjct: 12 RALYAWPGEREGDLKFTEGDLIECLSIGDGKWWIGRHINTNTQGIFPSNFVHCLDIPTVR 71
Query: 271 PANA 274
P ++
Sbjct: 72 PGSS 75
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 203 LEMLEATHRGLHKFNPRHHDEIEV-EIGD 230
LE EA+ H+F RH D++E+ EI D
Sbjct: 1088 LEPFEASKEAAHEFKLRHGDQVEIFEIPD 1116
>SPBC800.12c |||ubiquitin family protein,
unknown|Schizosaccharomyces pombe|chr 2|||Manual
Length = 137
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 282 LLGYMGSVETLAHKGTGVVCQAVKKIVGECSTEPTIQPCILEVSD 326
L+ + G++ K VV + V+ + + STE +Q ILE+ +
Sbjct: 43 LVEFQGNLALFEEKKVHVVAKTVRPPIQQASTEINVQSTILELKE 87
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 27.5 bits (58), Expect = 3.8
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 213 LHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEG--VNLRTGQQGIFPSAYAVDMD 265
L+ ++ +EI GD I V K ED W EG V +G FPS + +++
Sbjct: 615 LYDYDAAIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFVREIE 669
>SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 27.5 bits (58), Expect = 3.8
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 99 LPEIPKHKKSSILACGQPASLADELGALTGMLVRPGCHSRPLLVLKCGYLLDEDSSPDSE 158
+P+ P K S +S ++ L A T L+ H PL C + + + +P
Sbjct: 411 IPKTPNFKFISSTLLALVSSHSEILEASTDRLIWT-VHQGPLTATIC-HAFNLEKAPSMH 468
Query: 159 RL---QSLGDVDSGHSTAHSPIDT 179
L Q + DV HS + P+DT
Sbjct: 469 SLAEAQMIPDVPISHSNSMEPLDT 492
>SPCC576.02 |||hydantoin racemase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 236
Score = 26.6 bits (56), Expect = 6.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 83 SPRHQTFTNGERRRRKLPEIPKHKKSSILACGQP-ASLADEL--GALTGMLV 131
+P TF + +P +P K L C QP A++ D + LT LV
Sbjct: 8 NPNSSTFITTSMEEKLVPLVPSDVKLRFLTCPQPGAAVIDSITEATLTAALV 59
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 224 IEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSA 259
++ GD I V + ED WC+G+ + ++G FP++
Sbjct: 20 LKFSAGDTIIVIEVLEDGWCDGI--CSEKRGWFPTS 53
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 216 FNPRHHDEIEVEIGDPIYVQKEAEDLW 242
FN DE ++ PIY E ED+W
Sbjct: 216 FNLNRGDEGDIYNDVPIYADDEPEDIW 242
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.137 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,915,341
Number of Sequences: 5004
Number of extensions: 79472
Number of successful extensions: 162
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 154
Number of HSP's gapped (non-prelim): 14
length of query: 422
length of database: 2,362,478
effective HSP length: 75
effective length of query: 347
effective length of database: 1,987,178
effective search space: 689550766
effective search space used: 689550766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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