Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000570-TA|BGIBMGA000570-PA|IPR001452|Src homology-3,
IPR006020|Phosphotyrosine interaction region
(422 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54348| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 5e-15
SB_27365| Best HMM Match : PID (HMM E-Value=1.90001e-40) 55 1e-07
SB_51281| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17) 47 3e-05
SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 3e-05
SB_37706| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 8e-05
SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_32226| Best HMM Match : PID (HMM E-Value=3.9e-30) 41 0.002
SB_9817| Best HMM Match : PID (HMM E-Value=1.2e-20) 41 0.002
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 40 0.005
SB_34642| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14) 39 0.009
SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.015
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 38 0.015
SB_11486| Best HMM Match : SH3_1 (HMM E-Value=0.0037) 38 0.015
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 36 0.062
SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 34 0.19
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.25
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.25
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_8979| Best HMM Match : SH3_1 (HMM E-Value=3.6e-05) 33 0.33
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20) 33 0.44
SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) 33 0.44
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 33 0.58
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 33 0.58
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.58
SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40) 33 0.58
SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12) 32 0.76
SB_27192| Best HMM Match : SH3_1 (HMM E-Value=0.53) 32 1.0
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 32 1.0
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_19980| Best HMM Match : rve (HMM E-Value=0.91) 30 3.1
SB_44865| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 4.1
SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_33954| Best HMM Match : Ion_trans_2 (HMM E-Value=0.74) 29 9.4
>SB_54348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 79.4 bits (187), Expect = 5e-15
Identities = 34/64 (53%), Positives = 42/64 (65%)
Query: 201 SQLEMLEATHRGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY 260
S L+ TH HKF RH+DEI ++ GDP+ V + EDLWCEG NLRTGQ G+FPS Y
Sbjct: 175 SPTSQLKQTHVATHKFIMRHNDEINLDEGDPMMVYQTCEDLWCEGTNLRTGQCGVFPSRY 234
Query: 261 AVDM 264
+
Sbjct: 235 VASI 238
>SB_27365| Best HMM Match : PID (HMM E-Value=1.90001e-40)
Length = 837
Score = 54.8 bits (126), Expect = 1e-07
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 15/139 (10%)
Query: 281 YLLGYMGSVETLAHKGTGVVCQAVKKIV-------GECSTEPT-IQPCILEVSDQGLRMV 332
Y + + G E KGT V+ +A+ K+ E T+ + ++ L+++ G+ +
Sbjct: 34 YTVKFYGVTEVAEAKGTEVIKEAITKVQFANHIKKSEAGTKASKLRKVDLKINIDGVSIE 93
Query: 333 DRSKPERNRNGPCIDYFYSLKNVSFCAFHPRDHRYLGFITKHPTLQRFACHVFRGQESTR 392
D E + + Y L ++S+CA R+ R FI K T + C+VF +
Sbjct: 94 DSKSKE-------VLHSYPLHHISYCADDKRNKRVFAFIAKDKTSPKHTCYVFEAERLAE 146
Query: 393 PVAEAVGRAFQRFYQKFIE 411
+ VG+AF Y++F+E
Sbjct: 147 ELTLTVGQAFDLAYRRFLE 165
>SB_51281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 356 SFCAFHPRDHRYLGFITKHPTLQRFACHVFRGQESTRPVAEAV 398
S+ ++ + RY FITKHP RFACHVF + ST PVA ++
Sbjct: 13 SWESYSTKIKRYFAFITKHPEEPRFACHVFMSEFSTEPVAYSI 55
>SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17)
Length = 288
Score = 46.8 bits (106), Expect = 3e-05
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 204 EMLEATHRGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY 260
E+ + + L+ + P+ DE+E++ G+ YV ++ +D W +GV+L + ++G+FP Y
Sbjct: 67 EIGKELYTALYNYKPQKEDELELKQGECYYVLEKCKDGWFKGVSLHSQKRGVFPGNY 123
>SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 46.8 bits (106), Expect = 3e-05
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 204 EMLEATHRGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY 260
E+ + + L+ + P+ DE+E++ G+ YV ++ +D W +GV+L + ++G+FP Y
Sbjct: 67 EIGKELYTALYNYKPQKEDELELKQGECYYVLEKCKDGWFKGVSLHSQKRGVFPGNY 123
>SB_37706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 34
Score = 45.6 bits (103), Expect = 8e-05
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 367 YLGFITKHPTLQRFACHVFRGQESTRPVAEAV 398
Y FITKHP RFACHVF + ST PVA ++
Sbjct: 2 YFAFITKHPEEPRFACHVFMSEFSTEPVAYSI 33
>SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 42.3 bits (95), Expect = 7e-04
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 213 LHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY-AVD 263
+H+F DEI+++ GD + V K+ +D W GV R Q G FP + A+D
Sbjct: 11 IHEFQTTRDDEIDLQKGDVVLVVKKYQDGWFRGVRCRGYQVGCFPGNFVAID 62
>SB_32226| Best HMM Match : PID (HMM E-Value=3.9e-30)
Length = 591
Score = 40.7 bits (91), Expect = 0.002
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 285 YMGSVETLAHKGTGVVCQAVKKIVGECSTEPTIQPCILEVSDQGLRMVDRSKPERNRNGP 344
Y+G++E +GT V +A +K+ E + +L SD +R+VD
Sbjct: 124 YVGAIEVTESRGTQVCAEAFRKM-REAGVHKKKRMNLLVTSDC-IRVVDEETK------- 174
Query: 345 CIDYFYSLKNVSFCAFHPRDHRYLGFITKHPTLQRFACHVFRG-QESTRPVAEAVGRAFQ 403
+ ++K V FC P D R +I + T +R+ CH F +++ ++ AVG AF
Sbjct: 175 VVLPLTTIKGV-FCTPDPSDDRVFSYICREGTTRRWMCHCFIAIRDTGERLSHAVGCAFT 233
Query: 404 RFYQK 408
Q+
Sbjct: 234 ACLQR 238
>SB_9817| Best HMM Match : PID (HMM E-Value=1.2e-20)
Length = 144
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 281 YLLGYMGSVETLAHKGTGVVCQAVKKIV-------GECSTEPT-IQPCILEVSDQGLRMV 332
Y + + G E KGT V+ +A+ K+ E T+ + ++ L+++ G+ +
Sbjct: 34 YTVKFYGVTEVAEAKGTEVIKEAITKVQFANHIKKSEAGTKASKLRKVDLKINIDGVSIE 93
Query: 333 DRSKPERNRNGPCIDYFYSLKNVSFCAFHPRDHRYLGFITKHPTLQRFACHVFRGQ 388
D E + + Y L ++S+CA R+ R FI K T + C+VF +
Sbjct: 94 DSKSKE-------VLHSYPLHHISYCADDKRNKRVFAFIAKDKTSPKHTCYVFEAE 142
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 211 RGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVDMDYNDFD 270
+ +H + P+ DE+ + GD I V ++ D W G L G QG FP+ + ++ N+
Sbjct: 937 QAIHNYTPQQPDELALHEGDVINVLRKLPDGWYHGERLCDGVQGWFPANHTENI-RNEHI 995
Query: 271 PANAKVKRERYL 282
A ++R R L
Sbjct: 996 RARNLLQRYRLL 1007
>SB_34642| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14)
Length = 237
Score = 38.7 bits (86), Expect = 0.009
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 148 LLDEDSSPDSERLQSLG-DVDSGHSTAHS-PIDTGPKS-LSPIPLQQNGNMTTVPHSQLE 204
L E + ++ R+Q L V S +H P D P + P PLQQ VP
Sbjct: 124 LAGESNLENARRMQGLAATVQEELSKSHQRPCDDQPAAPYQPAPLQQ------VPQPSSS 177
Query: 205 MLEATHRGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY 260
A + ++ +N DE+ + GD I + ++ W G RTGQ G+ P+ Y
Sbjct: 178 N-SAQYLVMYDYNAADDDEVSMVEGDIIVDAEIIDEGWMVGRVKRTGQSGMLPANY 232
>SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1045
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 221 HDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSA 259
++ I VE GD I+ ++ +D W G NL TG+ G FPS+
Sbjct: 25 NNPISVERGDIIFDVRKLDDGWLTGKNLNTGRSGRFPSS 63
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 37.9 bits (84), Expect = 0.015
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 204 EMLEATH-RGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAV 262
E L+ T L+ F R+ DE+ +G I V K+ ++ W EG G G+FP +Y
Sbjct: 200 ENLDITFAEALYGFEARNKDELSFPMGAEIVVTKDVDNDWYEGT--FEGDTGLFPKSYVR 257
Query: 263 DMD 265
MD
Sbjct: 258 IMD 260
>SB_11486| Best HMM Match : SH3_1 (HMM E-Value=0.0037)
Length = 103
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 222 DEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVD 263
+EI++E+GD I + D + +G N RTGQ G++PS Y V+
Sbjct: 49 EEIDLEVGDLIGIAGNHWDGYSKGTNHRTGQMGLYPS-YKVE 89
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 35.9 bits (79), Expect = 0.062
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 216 FNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVD 263
+ P H DE+++ GD I+V ++ D W +G + T +QG FPS YA D
Sbjct: 213 YQPIHVDELQLTKGDLIHVLEKEGDGWWKGF-IGT-RQGWFPSNYAED 258
>SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 211 RGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEG-VNLRTGQQGIFPSAY 260
R L+ F PR ++ + GD +Y+ ++ ++ W EG VN G QG PS Y
Sbjct: 209 RVLYDFEPREQGDLALCKGDFVYLLRQVDENWFEGQVN---GCQGFLPSNY 256
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 34.3 bits (75), Expect = 0.19
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 213 LHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVDMDYNDFDPA 272
L + + DE+ + G I V +E ED W EG G++G+FPS + V + D P
Sbjct: 11 LFDYEAENADELSLVTGIEINVIREVEDGWWEGT--VDGRKGVFPSNF-VKLKPIDETPT 67
Query: 273 NAKVKRER 280
K + E+
Sbjct: 68 KTKRQPEK 75
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 171 STAHSPIDTGPKSLSPIPLQQNGNMTTVPHSQLEMLEATHRGLHKFNPRHHDEIEVEIGD 230
+ +HS + + P+P P ++ + T+ + ++ DE+E+++GD
Sbjct: 184 TASHSLGSSMKRKAPPVPPSPQPQEAQAPAKRVLRAKVTY----DYEQQNEDELELKVGD 239
Query: 231 PI-YVQKEAEDL--WCEGVNLRTGQQGIFPSAY 260
I V+KE D W EG G+ G+FP +
Sbjct: 240 IITIVKKEVFDTPGWMEGE--LDGKTGLFPDNF 270
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 375 PTLQRFACHVFRGQESTRPVAEAVGRAFQRFYQKFIETAYPIED 418
P + + CHVF+ E+ + +A+++G++F YQ+F+++ ED
Sbjct: 162 PKMIKITCHVFQADEA-QVIAKSIGQSFNVAYQEFLKSNGISED 204
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 33.9 bits (74), Expect = 0.25
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 208 ATHRGLHKFNPRHHDEIEVEIGDPIYVQK--EAEDLWCEGVNLRTGQQGIFPSAY 260
A + + + P EI + GD + V K E+ + W G N RTGQ G FP Y
Sbjct: 6 AKFQASYAYVPADDKEIPLAPGDFLVVAKPFESAEGWLVGRNNRTGQYGEFPGTY 60
>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1427
Score = 33.5 bits (73), Expect = 0.33
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 211 RGLHKFNPRHHDEIEVEIGDPI-YVQKEAEDLWCEGVNLRTGQQGIFPS 258
R +H ++ + + E GD I ++ A+ W G N +TG+ G+FP+
Sbjct: 384 RAVHGYDSKSPQNLCFEEGDKITLIEASADTSWWRGQNKKTGRVGMFPA 432
>SB_8979| Best HMM Match : SH3_1 (HMM E-Value=3.6e-05)
Length = 169
Score = 33.5 bits (73), Expect = 0.33
Identities = 11/40 (27%), Positives = 27/40 (67%)
Query: 211 RGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRT 250
+ ++ ++P++ DE+ +E G+ ++V ++ +D W G + RT
Sbjct: 60 KAMYGYSPQNEDELPLEEGEEVFVLEKCDDGWFVGHSTRT 99
>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
Length = 524
Score = 33.1 bits (72), Expect = 0.44
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 213 LHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVDMDYND 268
++ + DE+ + GD I V + + W G L G+QG FPS Y ++ + D
Sbjct: 315 MYPYEANRADELTITPGDVITVLYQDNENWWMG-ELADGRQGYFPSNYIMEKEELD 369
>SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13)
Length = 803
Score = 33.1 bits (72), Expect = 0.44
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 181 PKSLSPIPLQQNGNMTTVPHSQLEMLEAT-----------HRGLHKFNPRHHDEIEVEIG 229
P +L +P ++N ++ T + L + T R L+++ + E+ +
Sbjct: 326 PAALPAVPTEENADLYTTVNEVLPPQKPTARVPARPKERYFRALYEYEAQGDQELSFKAS 385
Query: 230 DPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVDMDYNDF 269
D I E +D WC G G++G+FP + +D+N F
Sbjct: 386 DIIRFLYEEDDTWCCGE--LNGKKGMFPKEF---VDWNTF 420
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 32.7 bits (71), Expect = 0.58
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 210 HRGLHKFNPRHHDEIEVEIGDPIYVQKE---AEDLWCEGVNLRTGQQGIFPSAYA 261
+R L+ F PR+ DEIEV D + V + A W G G+ G+FP+ YA
Sbjct: 16 YRVLYAFEPRNPDEIEVNEDDIVTVDHDNCTAPPGWLRG--KCHGKTGLFPANYA 68
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 213 LHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY 260
L+ F + E+ + G+ I V + +D W +G TG++G+FP Y
Sbjct: 6 LYDFVAQEAGELNFKKGNHIEVLDKEDDNWWKGRVAETGEEGLFPRNY 53
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 32.7 bits (71), Expect = 0.58
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 211 RGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVDM 264
+ ++ + DE+ + GD I V ++ W +G +L QQGIFP++Y ++
Sbjct: 566 KAIYDYQATQSDELTIHPGDIITVTARLDNGWWQG-DL-NNQQGIFPASYVEEI 617
>SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)
Length = 313
Score = 32.7 bits (71), Expect = 0.58
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 213 LHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY 260
L+ F DE+ + GD I + + D W +G G GIFPS+Y
Sbjct: 192 LYSFTGESEDELTMWAGDTIQLLEIVNDDWLKG--SLNGNTGIFPSSY 237
>SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)
Length = 979
Score = 32.3 bits (70), Expect = 0.76
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 207 EATHRGLHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY 260
+A ++ L ++NP EI + GD + +E W L T QQG P++Y
Sbjct: 921 KALYKALAEYNPVEAGEIALVEGDTVSFVREGNAGWWLVEQLSTRQQGWVPASY 974
>SB_27192| Best HMM Match : SH3_1 (HMM E-Value=0.53)
Length = 96
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 226 VEIGDPIYVQK--EAEDLWCEGVNLRTGQQGIFPSAY 260
+E GD + V K E+ + W G N RTGQ G FP Y
Sbjct: 30 LETGDFLVVAKPFESAEGWLVGRNNRTGQYGEFPGTY 66
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 31.9 bits (69), Expect = 1.0
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 286 MGSVETLAHKGTGVVCQAVKKIVGECS-TEPTIQPCILEVSDQGLRMVDRSKPERNRNGP 344
+G E +G + A+KK+ + T Q I+ V+ +G+R++D E+++
Sbjct: 49 LGLKEVSGPRGDTICIDAIKKLKQQIKQTGEHKQKIIMAVNLRGIRILD----EKSK--- 101
Query: 345 CIDYFYSLKNVSFCAFHPRDHRYLGFITKHPT 376
+ Y +++ VSF P D + G++ T
Sbjct: 102 ALVYEHAINKVSFITHDPEDKKIFGYVCSQAT 133
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 213 LHKFNPRHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGIFPSAY-AVDMDYNDFDP 271
L+ ++ R ++++ + G+ + + + W +L T Q+G PS Y A +M D
Sbjct: 83 LYDYDARTNEDLSFKKGERLQLLDNTDGDWWLAKSLSTDQEGYIPSNYVAPEMSVKSQDW 142
Query: 272 ANAKVKR 278
K+KR
Sbjct: 143 FFGKIKR 149
>SB_19980| Best HMM Match : rve (HMM E-Value=0.91)
Length = 367
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 219 RHHDEIEVEIGDPIYVQKEAEDLWCEGVNLRTGQQGI 255
+H E+ +E+G +Y+ EDL +G T +QGI
Sbjct: 199 KHPLEVPLEVGTEVYIATNEEDLQDKGRRRATDKQGI 235
>SB_44865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 29.9 bits (64), Expect = 4.1
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 15/135 (11%)
Query: 281 YLLGYMGSVETLAHKGTGVVCQAVKKIVGECST------EPTIQPCILEVSDQGLRMVDR 334
+ + ++G+ KG G V++IV E E +Q +L V + + + D
Sbjct: 182 FYVKWLGTRRVFDAKGPGCTDDTVREIVEEAKHLKMSHHEAKLQKVLLTVYTKKITIADM 241
Query: 335 SKPERNRNGPCIDYFYSLKNVSFCAFHPRDHRYLGFITKHPTLQRFACH-VFRGQES-TR 392
P + VS+C P + FI + + ++ CH V +ES +
Sbjct: 242 ETKVTKLEAP-------IYRVSYCTADPYFPKVFAFIVREQSSRKLYCHTVLCSKESMAK 294
Query: 393 PVAEAVGRAFQRFYQ 407
+A V AF Y+
Sbjct: 295 AIALTVADAFTVAYE 309
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 232 IYVQKEAEDLWCEGVNLRTGQQGIFPSAYAVDMDYNDFDPANAKVKRERYLLG 284
+Y + E LW V + +G+ P+ Y V + + F P A+++R +Y G
Sbjct: 2666 LYGCRRGERLWDNAVGMHSGRIKTRPN-YCVIIRHRQFAPHQARLRRHKYRNG 2717
>SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 171 STAHSPIDTGPKSLSPIPLQQNGNMTTVP 199
S++HSP++ P + SP +GN TT P
Sbjct: 67 SSSHSPLNNPPTTSSPGNASSSGNSTTSP 95
>SB_33954| Best HMM Match : Ion_trans_2 (HMM E-Value=0.74)
Length = 330
Score = 28.7 bits (61), Expect = 9.4
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 256 FPSAYAVDMDYNDFDPANAKVKRERYLLGYMGSVETLAHKGTGVVCQAVKKIVGECSTEP 315
FP +D + +D + ++AK + + GS+ +++ G + + + +I S
Sbjct: 140 FPRMSKIDSEASDSEQSHAKTRSQALSPDTSGSMTNISN-GLRGISEVMLQITAPVSRRM 198
Query: 316 TIQPCILEVSDQGLRMVDRSK 336
I PC + +G R R K
Sbjct: 199 AISPCPTPPNKRGSRKKRRLK 219
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.137 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,354,447
Number of Sequences: 59808
Number of extensions: 606342
Number of successful extensions: 1443
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1420
Number of HSP's gapped (non-prelim): 37
length of query: 422
length of database: 16,821,457
effective HSP length: 84
effective length of query: 338
effective length of database: 11,797,585
effective search space: 3987583730
effective search space used: 3987583730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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