GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000569-TA|BGIBMGA000569-PA|undefined
         (140 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3BWU5 Cluster: Putative uncharacterized protein; n=1; ...    35   0.54 
UniRef50_Q7QZE2 Cluster: GLP_43_29864_28110; n=1; Giardia lambli...    35   0.54 
UniRef50_A6DJH1 Cluster: Transposase; n=1; Lentisphaera araneosa...    33   2.2  
UniRef50_A0A7L7 Cluster: Putative uncharacterized protein; n=1; ...    31   6.6  
UniRef50_A7DR13 Cluster: Putative uncharacterized protein; n=1; ...    31   8.8  

>UniRef50_Q3BWU5 Cluster: Putative uncharacterized protein; n=1;
           Xanthomonas campestris pv. vesicatoria str. 85-10|Rep:
           Putative uncharacterized protein - Xanthomonas
           campestris pv. vesicatoria (strain 85-10)
          Length = 81

 Score = 35.1 bits (77), Expect = 0.54
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 76  RILSTNPFYYNVLLCKRPNVIHETISRSRKVSAVTGVIFAAIVYIA 121
           R + T   Y + ++ K P + H+ +SR+R  SA+ GV  A +V++A
Sbjct: 13  RCVETAHLYASKMMSKSPRLQHDDVSRTRSTSAIAGVT-ATLVFLA 57


>UniRef50_Q7QZE2 Cluster: GLP_43_29864_28110; n=1; Giardia lamblia
          ATCC 50803|Rep: GLP_43_29864_28110 - Giardia lamblia
          ATCC 50803
          Length = 584

 Score = 35.1 bits (77), Expect = 0.54
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 41 VDLLPTPYNPDIYLCVTKSPLIKFRNTALGF-INNRRILSTNPFY 84
          + +L + YN  I  C+ K  L K R+T+LGF  +NR  L   P Y
Sbjct: 9  IKMLSSDYNGSIETCLVKGRLFKLRDTSLGFEPSNREYLRDFPAY 53


>UniRef50_A6DJH1 Cluster: Transposase; n=1; Lentisphaera araneosa
           HTCC2155|Rep: Transposase - Lentisphaera araneosa
           HTCC2155
          Length = 417

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 82  PFYYNVLLCKRPNVIHETISRSRKVSAVTGVIFAAIVYIATLH 124
           P ++ +LL KRP+VIH  +       A T   F  I Y+ +LH
Sbjct: 93  PMFFRLLLGKRPSVIHTHVQHRLGGIARTVAKFKKIPYVVSLH 135


>UniRef50_A0A7L7 Cluster: Putative uncharacterized protein; n=1;
          Cyanophage Ma-LMM01|Rep: Putative uncharacterized
          protein - Cyanophage Ma-LMM01
          Length = 271

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 34 PLNAQNAVDLLPTPYNPDIYLCVTKSPLIKFRNTALGFINNRRILSTNPFYYNV 87
          P+N  N +        P   + +T+S L++F +TALG  NN  + +   F+  +
Sbjct: 4  PINTINGITYFGYKSGPSPGIDITRSQLVEFLDTALGAANNEVLPNVMGFHARI 57


>UniRef50_A7DR13 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
           uncharacterized protein - Candidatus Nitrosopumilus
           maritimus SCM1
          Length = 170

 Score = 31.1 bits (67), Expect = 8.8
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 67  TALGFINNRRILSTNPFYYNVLLCKRPNVIHETISRSRKVSAVTGVIFAAIVY 119
           TALGFI     +S  P +++V +   P+ I  +I+ +  +SA+ G+ FA + +
Sbjct: 33  TALGFIYYFLTMSMLPSHFDVAVEISPSYIATSITLTVVISALAGINFAMMAF 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.323    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,507,533
Number of Sequences: 1657284
Number of extensions: 4841663
Number of successful extensions: 7856
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7851
Number of HSP's gapped (non-prelim): 5
length of query: 140
length of database: 575,637,011
effective HSP length: 93
effective length of query: 47
effective length of database: 421,509,599
effective search space: 19810951153
effective search space used: 19810951153
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 67 (31.1 bits)