GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000569-TA|BGIBMGA000569-PA|undefined
         (140 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119114-1|AAM50974.1|  699|Drosophila melanogaster RE15216p pro...    30   0.99 
AE014296-3764|ABI31272.1|  309|Drosophila melanogaster CG41454-P...    30   0.99 
AE014296-3763|AAS64918.1|  699|Drosophila melanogaster CG33217-P...    30   0.99 
AF095822-1|AAD17839.1|  393|Drosophila melanogaster ecdysteroid-...    27   7.0  

>AY119114-1|AAM50974.1|  699|Drosophila melanogaster RE15216p
           protein.
          Length = 699

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 38  QNAVDLLPTPYNPDIYLCVTKSPLIKFRNTALGFINNRRILSTNPFYYNVLLCKR 92
           +N  DLL T  +P+  LC  +SPLI    +A+  I N +    NP Y N  L K+
Sbjct: 551 ENRHDLLQTIKSPEDQLCNNESPLI----SAIETIANNKDNQKNPGYDNNSLNKK 601


>AE014296-3764|ABI31272.1|  309|Drosophila melanogaster CG41454-PA
           protein.
          Length = 309

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 38  QNAVDLLPTPYNPDIYLCVTKSPLIKFRNTALGFINNRRILSTNPFYYNVLLCKR 92
           +N  DLL T  +P+  LC  +SPLI    +A+  I N +    NP Y N  L K+
Sbjct: 98  ENRHDLLQTIKSPEDQLCNNESPLI----SAIETIANNKDNQKNPGYDNNSLNKK 148


>AE014296-3763|AAS64918.1|  699|Drosophila melanogaster CG33217-PA
           protein.
          Length = 699

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 38  QNAVDLLPTPYNPDIYLCVTKSPLIKFRNTALGFINNRRILSTNPFYYNVLLCKR 92
           +N  DLL T  +P+  LC  +SPLI    +A+  I N +    NP Y N  L K+
Sbjct: 551 ENRHDLLQTIKSPEDQLCNNESPLI----SAIETIANNKDNQKNPGYDNNSLNKK 601


>AF095822-1|AAD17839.1|  393|Drosophila melanogaster
           ecdysteroid-inducible polypeptideEIP40 protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 38  QNAVDLLPTPYNPDIYLCVTKSPLIKFRNTALGFINNRRILSTNPFYYNVL 88
           QNAVD++P+P++        K+  ++        +   + L TNPF   VL
Sbjct: 233 QNAVDIVPSPFDCYQVNRSLKTLSLRMEQHQKNALKVAKYLETNPFVEKVL 283


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,228,672
Number of Sequences: 52641
Number of extensions: 227455
Number of successful extensions: 413
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 4
length of query: 140
length of database: 24,830,863
effective HSP length: 78
effective length of query: 62
effective length of database: 20,724,865
effective search space: 1284941630
effective search space used: 1284941630
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)