SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000568-TA|BGIBMGA000568-PA|IPR006202|Neurotransmitter-
gated ion-channel ligand-binding, IPR006029|Neurotransmitter-gated
ion-channel transmembrane region, IPR006028|Gamma-aminobutyric acid A
receptor, IPR002289|Gamma-aminobutyric-acid A receptor, beta subunit,
IPR006201|Neurotransmitter-gated ion-channel
         (374 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_52790| Best HMM Match : No HMM Matches (HMM E-Value=.)             140   2e-33
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)        130   2e-30
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)             126   2e-29
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)              123   3e-28
SB_16665| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.10001e-40)    119   3e-27
SB_53778| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)              116   2e-26
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)       113   3e-25
SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.)             109   4e-24
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)             109   5e-24
SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10)       103   2e-22
SB_6751| Best HMM Match : Neur_chan_memb (HMM E-Value=1.7e-07)        103   2e-22
SB_51055| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)              103   3e-22
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)        103   3e-22
SB_53537| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               99   7e-21
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               97   2e-20
SB_27831| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.6e-11)         97   3e-20
SB_58314| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-36)         97   3e-20
SB_32998| Best HMM Match : No HMM Matches (HMM E-Value=.)              94   1e-19
SB_3157| Best HMM Match : Neur_chan_memb (HMM E-Value=0.00016)         91   1e-18
SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.)               89   7e-18
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)              88   1e-17
SB_31365| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-06)        84   2e-16
SB_13579| Best HMM Match : Neur_chan_memb (HMM E-Value=0.00056)        83   4e-16
SB_50589| Best HMM Match : Neur_chan_memb (HMM E-Value=9.2e-05)        80   3e-15
SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10)        79   4e-15
SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12)          74   2e-13
SB_10099| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.6e-17)         73   3e-13
SB_45611| Best HMM Match : p450 (HMM E-Value=0)                        73   4e-13
SB_8533| Best HMM Match : No HMM Matches (HMM E-Value=.)               71   2e-12
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)              70   4e-12
SB_30690| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-09)        66   3e-11
SB_31582| Best HMM Match : Neur_chan_memb (HMM E-Value=0.58)           66   4e-11
SB_19928| Best HMM Match : Neur_chan_memb (HMM E-Value=4e-08)          63   3e-10
SB_10344| Best HMM Match : No HMM Matches (HMM E-Value=.)              59   7e-09
SB_40028| Best HMM Match : Neur_chan_memb (HMM E-Value=2.2)            53   4e-07
SB_49966| Best HMM Match : Neur_chan_memb (HMM E-Value=0.064)          51   2e-06
SB_10532| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   3e-06
SB_55738| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   4e-04
SB_53446| Best HMM Match : Neur_chan_memb (HMM E-Value=0.038)          43   4e-04
SB_47353| Best HMM Match : Neur_chan_memb (HMM E-Value=3.2)            43   4e-04
SB_41127| Best HMM Match : Neur_chan_memb (HMM E-Value=5.9)            42   0.001
SB_10741| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.71)            40   0.003
SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49)          38   0.013
SB_7114| Best HMM Match : Neur_chan_memb (HMM E-Value=0.058)           37   0.031
SB_10744| Best HMM Match : 7tm_1 (HMM E-Value=3.2e-22)                 36   0.041
SB_41472| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.12 
SB_55264| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.29 
SB_52529| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)                 33   0.29 
SB_14026| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.50 
SB_4969| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-08)          33   0.50 
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)         32   0.87 
SB_2422| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.2  
SB_20890| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.5  
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)         31   2.0  
SB_34114| Best HMM Match : Transthyretin (HMM E-Value=1.1e-13)         30   2.7  
SB_14632| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.0002)          30   2.7  
SB_18201| Best HMM Match : rve (HMM E-Value=3.6e-21)                   30   3.5  
SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21)                     30   3.5  
SB_34848| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.7  
SB_46458| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.7  
SB_9067| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.7  
SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)        29   6.2  
SB_44531| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.2  
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)                    29   6.2  

>SB_52790| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 467

 Score =  140 bits (338), Expect = 2e-33
 Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 32/303 (10%)

Query: 69  ITLTTVGYTMRDIRYKWN--EGPNSVGVSSEVSL-PQFKVLGHRQRAMEISLTTGNYSRL 125
           + + + GY++  I YKW   EG     V  +V L PQF +      +       GN+S +
Sbjct: 188 LIMESYGYSVEHIMYKWEKGEGDGMSFVPRDVKLLPQFNLTKLELSSRNTQYVIGNWSGV 247

Query: 126 ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXX 185
                F R+  +Y+I IY PS LIV+ISW+SF L R+ +PARV LG              
Sbjct: 248 MATFTFERTYSFYVIHIYGPSALIVLISWISFLLPRDQSPARVTLGVTSVLTEVTILTMS 307

Query: 186 NAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKL 245
           N A+PK++YVK++D YL  CF+ VFASL+EY+ +  +A R   R+++  A +++A EK+ 
Sbjct: 308 NNAMPKVNYVKAVDKYLIACFLFVFASLMEYSLILVLANRTMRREKQKRAAKRLAMEKE- 366

Query: 246 PECPPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGG 305
             C               S   P      +S  +R   H     S   +L N      G 
Sbjct: 367 -NC---------------SEHDPENSKLLLSPNIRCACH---RRSPSSSLRN----ANGN 403

Query: 306 ADEENPGPHPIHPGKDISKLLGMTPSD-----IDKYSRIVFPVCFVCFNLMYWIIYLHVS 360
           A + N   +  H    +  +  +   D     +D+YSR +FP+ F  FN+ YW++    S
Sbjct: 404 AHQPNFALNVTHRDSLLVSIRDILYRDETILAVDEYSRKLFPLAFFAFNVYYWVLVFWFS 463

Query: 361 DVV 363
            ++
Sbjct: 464 HLL 466


>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
          Length = 296

 Score =  130 bits (313), Expect = 2e-30
 Identities = 66/174 (37%), Positives = 94/174 (54%), Gaps = 5/174 (2%)

Query: 62  HRQRATVITLTTVGYTMRDIRYKWNEGPNSVG----VSSEVSLPQFKVLGHRQRAMEISL 117
           H  +   + L + GY   D+ Y+WN   NS G    +S ++ +PQFK+   +        
Sbjct: 88  HDVQVCEMMLESYGYQATDVYYRWNSR-NSTGDVVYISEDLEMPQFKITNVKLEERTNIY 146

Query: 118 TTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 177
             G +S L  +  F R +GYY+IQ YIPS L V ISW SFW++ ++ PARV LG      
Sbjct: 147 NIGPHSALIAKFTFHRRLGYYMIQTYIPSMLTVTISWFSFWISPDSPPARVGLGITTVLT 206

Query: 178 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQ 231
                    A LPK+SY K+ID +L  C V VF +L+EYA V + A ++Q R +
Sbjct: 207 MITISNSARAPLPKVSYTKAIDWFLLMCLVYVFGALMEYAIVNFYACKVQQRNR 260


>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1622

 Score =  126 bits (305), Expect = 2e-29
 Identities = 63/156 (40%), Positives = 94/156 (60%), Gaps = 4/156 (2%)

Query: 69  ITLTTVGYTMRDIRYKWNEGPNS--VGVSSEVSLPQFKVLGHRQRAMEIS-LTTGNYSRL 125
           I L+ VGY + D+ YKW  G +   + V  +++L +F  L   Q   +IS   TG++S +
Sbjct: 721 IALSRVGYPINDVVYKWRLGRSDEDIKVKQDLALTKF-TLWKIQTFTKISHYVTGSFSGI 779

Query: 126 ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXX 185
             E    R   YY+IQI++P  +IV +SW+SFW++ ++TPAR+ALG              
Sbjct: 780 VAEFTMTRRALYYVIQIFLPCAMIVFLSWISFWIDSHSTPARIALGITTVLSMTTLLFGV 839

Query: 186 NAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 221
            ++LPK+ YVKS+DVY+   F +VFASL+EYA V Y
Sbjct: 840 QSSLPKVPYVKSLDVYMFVSFTLVFASLIEYACVHY 875


>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 364

 Score =  123 bits (296), Expect = 3e-28
 Identities = 90/293 (30%), Positives = 144/293 (49%), Gaps = 28/293 (9%)

Query: 69  ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAM--EISLTTGNYSRLA 126
           + L +  Y+ ++I Y+W + P  V V ++ +L QF +  + + +   EI    GNYS L 
Sbjct: 97  LKLGSYSYSTKNIVYRW-QSPLGVTVRNK-NLAQF-IFTYLELSEYEEIYGMMGNYSILQ 153

Query: 127 CEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXN 186
            +  F R +GY+LIQ+Y P   +V++SW+ FW++++    R+ALG              N
Sbjct: 154 VDFAFKRRLGYFLIQVYAPDIFVVLLSWIVFWMDKDDMGNRMALGITTILTIMFLLGSVN 213

Query: 187 AALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLP 246
           AA+P++SY K++D YL   F +VF  L+E   V  ++K    R++R   I KI +     
Sbjct: 214 AAMPRVSYPKALDWYLMVSFSLVFLVLIECMIVFVISKYKNDRRKR--RISKILNSGNST 271

Query: 247 ECPPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGGA 306
           +  P  D  +L K  T         S+ +      + HD         L  +IN   G  
Sbjct: 272 KRVPWLD--SLRKRETNGNARAMEKSELLEMNPSVQ-HDESNVPTPPKLRLSINDLTGS- 327

Query: 307 DEENPGPHPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLHV 359
                     H G+       +  SD+DK++RIVFP+ F+ FN++YW IYL V
Sbjct: 328 ----------HEGE-------LHDSDVDKFARIVFPMVFIVFNILYWCIYLKV 363


>SB_16665| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.10001e-40)
          Length = 935

 Score =  119 bits (287), Expect = 3e-27
 Identities = 57/132 (43%), Positives = 79/132 (59%)

Query: 116 SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXX 175
           SL  G+YSRL    +F RS+G++LIQ YIP+ LIV++SW++FW+N  +TPAR+ LG    
Sbjct: 387 SLVPGSYSRLTVLFRFERSIGFFLIQTYIPAYLIVMLSWIAFWINHTSTPARIGLGITTV 446

Query: 176 XXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVA 235
                      A+LPK+SYVKSI+ +L  CF+ VF SL+EY  V Y   R   +  R   
Sbjct: 447 LTMTTLTNSARASLPKVSYVKSIEWFLIMCFLYVFMSLVEYGCVSYEVNRKLKKGVRLPV 506

Query: 236 IQKIASEKKLPE 247
             +   + K PE
Sbjct: 507 EAEQEQQTKEPE 518


>SB_53778| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 383

 Score =  116 bits (280), Expect = 2e-26
 Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 2/181 (1%)

Query: 69  ITLTTVGYTMRDIRYKW-NEGPNSVGVSSEV-SLPQFKVLGHRQRAMEISLTTGNYSRLA 126
           I + + GY+  +++Y+W N   N + V+ ++  +PQ+ +              GN+S L 
Sbjct: 165 IDIESYGYSADNVQYQWENRSDNGIAVNKKIRDMPQYNLSDINVSRHFTMYVAGNWSGLT 224

Query: 127 CEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXN 186
              +F R  GY++I IY P  LIVI+SW+SF +   +T AR+ALG              N
Sbjct: 225 ATFRFRRRSGYFIIHIYAPCALIVILSWISFCIPPESTAARIALGITSVLTITTILNMLN 284

Query: 187 AALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLP 246
            ++PK+SYVK++D YL  CF+ VFA LLEY  V Y+      +++R   + + +  +++ 
Sbjct: 285 NSMPKVSYVKAVDWYLIGCFLFVFAVLLEYTFVLYIDNVHNKKRKRHKHVPRDSQAEEVT 344

Query: 247 E 247
           E
Sbjct: 345 E 345


>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
          Length = 517

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 2/151 (1%)

Query: 69  ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
           +++ +  Y +R + Y+W   P    +  E+S  QF +              G YS L   
Sbjct: 99  LSIISYAYPVRHLLYRWKNSPGIKVLDGEMS--QFYMTRITTSLRNEIYVAGEYSVLKAS 156

Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
             F R +G+YLIQIYIP   IV ++W+S W++R ATPARV+L               NA+
Sbjct: 157 FTFQRRVGFYLIQIYIPCMAIVFVAWMSLWVDRRATPARVSLCITTLLTIATIWGNVNAS 216

Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATV 219
           +P++SYVKSID+YL T F  V  +LLEY  +
Sbjct: 217 MPRVSYVKSIDIYLMTSFTFVLGTLLEYIVI 247


>SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 436

 Score =  109 bits (262), Expect = 4e-24
 Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 3/159 (1%)

Query: 69  ITLTTVGYTMRDIRYKWN-EGPNSVGVSSEV--SLPQFKVLGHRQRAMEISLTTGNYSRL 125
           +TL + GY+   I +KW  E  + +G   E    LPQ+K+       +      GN+S +
Sbjct: 148 LTLESYGYSSDHIVFKWEIEDGDGLGFVPESLKMLPQYKLARVHLSTLHNEYVVGNWSGI 207

Query: 126 ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXX 185
                F R   Y++I +Y P  LIV++SWVSF L +   PAR+ LG              
Sbjct: 208 KALFTFERMYSYFVIHVYGPCALIVVVSWVSFLLPKEQAPARITLGVTSVLTVVTILNML 267

Query: 186 NAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAK 224
           N ++PK++YVK+ID YL  CF+ VFA+L+EY+ V ++ K
Sbjct: 268 NNSMPKVNYVKTIDKYLIGCFLFVFATLVEYSLVLWLTK 306



 Score = 32.3 bits (70), Expect = 0.66
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 2/25 (8%)

Query: 7  ISAILDSFSIS--YDKRVRPNYGVG 29
          +S ILDS   +  YDKR+RPNYG G
Sbjct: 7  VSRILDSILTAEKYDKRLRPNYGAG 31


>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 534

 Score =  109 bits (261), Expect = 5e-24
 Identities = 63/166 (37%), Positives = 87/166 (52%), Gaps = 3/166 (1%)

Query: 84  KWNEGPN-SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQI 142
           KW  G   SV  +  ++LPQ  VLG + R +     +GN+SRL+   +F R +  +L + 
Sbjct: 201 KWKFGETGSVTWAENINLPQMDVLGVKGREVVDVFASGNFSRLSLAFKFKRRISLFLTET 260

Query: 143 YIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYL 202
           Y+P  LIV +SWVSFW+N    PARVAL                 +LPK++Y K  D  L
Sbjct: 261 YVPLVLIVALSWVSFWINYKVAPARVALCITTVLTIITLSASVRTSLPKVTYTKYSDWIL 320

Query: 203 GTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQ-KIASEKKLPE 247
            T  V VF +L+EYA V Y     Q +K    A+  + A E +LPE
Sbjct: 321 ITGLVYVFGALVEYAVVNYF-DNAQAKKNVAKAVDVENAKETELPE 365


>SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10)
          Length = 624

 Score =  103 bits (248), Expect = 2e-22
 Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 10/173 (5%)

Query: 67  TVITLT-----TVGYTMRDIRYKWNEGPNSVGVSSEV---SLPQFKVLGHRQRAMEISLT 118
           T++TLT      V Y   D+++ W +    VG    V    + QF ++  ++        
Sbjct: 306 TILTLTYPRYVLVSYDNNDLQFSWRK--KEVGSEIWVYDRQMAQFDIVSAKRFLKHKIFH 363

Query: 119 TGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXX 178
           +  +S L   I F R   YY+ Q+YIP   IV ISWVSFW+N  A PARVAL        
Sbjct: 364 SDQFSGLTATIVFQRRSAYYVFQMYIPCVCIVAISWVSFWINHEAVPARVALSITTVLTI 423

Query: 179 XXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQ 231
                  NA +P++SY+KSID +L   FV +F +L+EY  V   ++R + + +
Sbjct: 424 SYMRGSVNAGMPRVSYLKSIDYFLLGSFVFIFMTLIEYVLVLKYSRREKFKAE 476


>SB_6751| Best HMM Match : Neur_chan_memb (HMM E-Value=1.7e-07)
          Length = 213

 Score =  103 bits (247), Expect = 2e-22
 Identities = 51/149 (34%), Positives = 82/149 (55%)

Query: 76  YTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSM 135
           YT +DI+Y+W    +S       +L QF +    +         GN+S +  E  F R +
Sbjct: 3   YTTQDIKYRWRPPMSSSVDVRNRNLAQFALTSIIEVEYVEHYDLGNFSIIQVEFTFQRRL 62

Query: 136 GYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYV 195
           GY+LIQ+YIPS  +V++SW+ FW++++    R+ALG              NA++P++SY 
Sbjct: 63  GYFLIQVYIPSIFVVVLSWIVFWMDKDNMGDRMALGITTVLTIMFLLGAVNASMPRVSYP 122

Query: 196 KSIDVYLGTCFVMVFASLLEYATVGYMAK 224
           K++D YL   F +VF  L+E  TV  ++K
Sbjct: 123 KALDWYLMVSFTLVFLVLIECMTVFVISK 151


>SB_51055| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 456

 Score =  103 bits (246), Expect = 3e-22
 Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 3/165 (1%)

Query: 69  ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
           I+  + GYT  DI Y+W +    V  + +  + QF +       +     TG++S L   
Sbjct: 192 ISFASYGYTTADIVYQWAD--ERVTWAHDQEIAQFVLEKIETENLTRRYITGDFSALGIR 249

Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG-XXXXXXXXXXXXXXNA 187
           ++  R +G+YL ++Y+P+ LIV++SW+SF+L+R++ PARV+LG                 
Sbjct: 250 LRLNRRLGHYLTRVYVPAVLIVMLSWLSFYLDRHSAPARVSLGITTVLTMTTLLIGIGQG 309

Query: 188 ALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQR 232
           +LP +SYVK++D YL   + MVF +  EYA + +  K   ++ +R
Sbjct: 310 SLPVVSYVKALDWYLFVSYCMVFGAFAEYAVINHRDKSYFLKLRR 354



 Score = 37.1 bits (82), Expect = 0.023
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 330 PSDIDKYSRIVFPVCFVCFNLMYWIIYL 357
           P  ID++S+ +FP+ F  FN  YWI YL
Sbjct: 425 PGLIDEWSKKLFPLIFTLFNFFYWIYYL 452


>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
          Length = 636

 Score =  103 bits (246), Expect = 3e-22
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 26/284 (9%)

Query: 76  YTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSM 135
           +T  DI ++WN  PN +    +  L QF + G+           GNY+ +    +  R +
Sbjct: 365 FTDTDIFFRWNN-PNKLSRVQKSDLAQFHLAGYDLITETGIYEEGNYTTVKVIFKMNRRV 423

Query: 136 GYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYV 195
           GYY+IQ Y P  LIV++SW+ FW++      R+ALG              NA++PK+SY 
Sbjct: 424 GYYIIQAYCPDVLIVVLSWIIFWMDVKDMGDRMALGITTILTIMFLLGAVNASMPKVSYP 483

Query: 196 KSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPECPPVGDPH 255
           K++D YL   F  VF +L+E   V  +  + +  K +  +     +++ +    PV    
Sbjct: 484 KALDWYLMVSFAFVFLTLIESMIVFLLTPQGESEKPKKTS---CLTKRVVTMLTPV---- 536

Query: 256 TLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGGADEENP--GP 313
                  L R P S    T +      +    A      L     GGR G +        
Sbjct: 537 -------LRRRPNSHVVTTPNNHELNNISPTDA----ALLNPEDGGGREGPNGTKACWDD 585

Query: 314 HPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYL 357
           H  H  +  SK  G     +D+ SR++FP+ FV +N+ YW  YL
Sbjct: 586 HTGHVKE--SKCAGYR---VDQISRVLFPLAFVFYNVAYWYTYL 624


>SB_53537| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 379

 Score = 98.7 bits (235), Expect = 7e-21
 Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 65  RATVITLTTVGYTMRDIRYKWN-EGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYS 123
           +A  + + +  YT  DI+YKW   G   + + S  +  QF ++  R   +  +  +G++S
Sbjct: 180 QACPLFIESYAYTSEDIKYKWTPRGTKGIEIISNETA-QFVLVEARTEQIATAKISGHFS 238

Query: 124 RLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXX 183
           +L       R + Y+ I +  P+ ++V++SW  FW+  +A PAR++L             
Sbjct: 239 QLVATFSLKRRLEYFAITVVTPAMILVVLSWCCFWIVPDAIPARISLSVTTILSTLLLSG 298

Query: 184 XXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 219
             NA +PK+SY+K+IDV++   F  +F SL+EY  V
Sbjct: 299 TVNAQMPKVSYMKAIDVFVLGNFAFIFLSLIEYVAV 334


>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 480

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 3/151 (1%)

Query: 64  QRATVITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYS 123
           QR +++ L +  YT R I +KW E  N V + ++  L +F V  +       +   G Y 
Sbjct: 205 QRCSLV-LESFAYTGRQIDFKWKE-INPVVIFNK-DLAEFDVTSYEISERNATYVAGVYK 261

Query: 124 RLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXX 183
            L     F R MG+Y IQ YIP  ++V +SW+SFW++R     RV+LG            
Sbjct: 262 NLVVTFTFKRRMGFYFIQFYIPCIVMVTLSWISFWMDRYYIGERVSLGITTVLTIVFLLG 321

Query: 184 XXNAALPKISYVKSIDVYLGTCFVMVFASLL 214
             N+ +P++SY K+ID YL   F+ VF++L+
Sbjct: 322 SSNSTMPRVSYAKAIDWYLIGSFMFVFSTLV 352


>SB_27831| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.6e-11)
          Length = 350

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 49/157 (31%), Positives = 80/157 (50%)

Query: 69  ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
           + L +  +   D+ Y+W +   S     +  + QF V+  +++       +  +S +   
Sbjct: 97  LALESFSFDEEDLMYEWKKPVGSDVFIYDAEMAQFTVVNVKRKLKHPLYHSRRFSGMTVT 156

Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
            +F R   YY+ Q+YIP   IV +SWVSFW++ +A PARV L               N+ 
Sbjct: 157 FKFQRRTMYYIFQMYIPCVCIVALSWVSFWVDADAVPARVGLSITTVLTICYMLGSVNSN 216

Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKR 225
           LP++SY+K+ID +L   F  +F +L+EY  V   AKR
Sbjct: 217 LPRVSYLKAIDYFLLLSFGFIFLTLVEYVFVLKYAKR 253


>SB_58314| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-36)
          Length = 444

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 45/137 (32%), Positives = 71/137 (51%)

Query: 83  YKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQI 142
           Y W  G +         + QF+ +G        + + G+++ L  E  F R + Y++   
Sbjct: 193 YTWKGGDDQGVEIVSKEMAQFEFIGANTYTKAQTNSKGSFASLRAEFTFKRRVAYFITAT 252

Query: 143 YIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYL 202
           Y+P+ ++VI+SW +FW++RNA PARV L               N ++PK+SY K+ID +L
Sbjct: 253 YMPAMILVILSWCTFWIHRNAGPARVTLSITTILTTILLTSSTNGSMPKVSYSKAIDYFL 312

Query: 203 GTCFVMVFASLLEYATV 219
            T    +F SLLEY  V
Sbjct: 313 MTSLGFIFMSLLEYILV 329



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 10/26 (38%), Positives = 19/26 (73%)

Query: 333 IDKYSRIVFPVCFVCFNLMYWIIYLH 358
           ID+ +R++FP+ +  F + YWI Y++
Sbjct: 410 IDRTARVIFPIVYFIFVIAYWIYYIN 435


>SB_32998| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 677

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 3/123 (2%)

Query: 120 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 179
           G++  L    +F R   Y+++Q Y+PS  IV +SW+ FW+N+NA PAR++L         
Sbjct: 375 GSFDSLRVSFRFKRRTSYFIVQHYVPSAFIVFLSWLGFWINKNAVPARISLTVTCILSTM 434

Query: 180 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMA--KRIQM-RKQRFVAI 236
                 N++LP+ISY+K++D YL   F+ + AS++EY  V  +   KRI + RK      
Sbjct: 435 VLFESINSSLPRISYLKAVDYYLIISFMFILASMVEYVLVLNVTDYKRITLSRKHSLQTT 494

Query: 237 QKI 239
           Q I
Sbjct: 495 QSI 497


>SB_3157| Best HMM Match : Neur_chan_memb (HMM E-Value=0.00016)
          Length = 118

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 37/99 (37%), Positives = 60/99 (60%)

Query: 121 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXX 180
           ++  L    +F R   Y+++Q Y+PS  IV +SW+ FW+N+NA PAR++L          
Sbjct: 2   SFDSLRVSFRFKRRTSYFIVQHYVPSAFIVFLSWLGFWINKNAVPARISLTVTCILSTMV 61

Query: 181 XXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 219
                N++LP+ISY+K++D YL   F+ + AS++EY  V
Sbjct: 62  LFESINSSLPRISYLKAVDYYLIISFMFILASMVEYVLV 100


>SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 926

 Score = 88.6 bits (210), Expect = 7e-18
 Identities = 41/103 (39%), Positives = 59/103 (57%)

Query: 119 TGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXX 178
           +G YS L     F R +  YL+  Y+P+ L V++SWVSF+++ N+ PAR ALG       
Sbjct: 73  SGTYSSLVATFPFRRRIQNYLLSFYVPTILTVMLSWVSFFISPNSAPARCALGIITVLAV 132

Query: 179 XXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 221
                    + P +SYV S D+Y+  C+V VF +LLEYA V +
Sbjct: 133 GGFLTNQRKSFPTVSYVMSADLYILVCYVFVFCALLEYAVVHF 175


>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 19/239 (7%)

Query: 117 LTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXX 176
           L  G +S +   I+F R +  +L+  Y+P+ L V++SWVSF+++ N+ PAR ALG     
Sbjct: 292 LARGVFSAVRASIEFRRRIQNFLLCFYVPTILTVMLSWVSFFISPNSAPARCALGIITVL 351

Query: 177 XXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAI 236
                      + P +SYV S D+Y+  C+V VF +LLEYA V Y        KQ  +  
Sbjct: 352 AVGGFLTGQQRSSPVVSYVTSADLYILVCYVFVFCALLEYAVVHYF---FVYEKQ--IYQ 406

Query: 237 QKIASEKKLPECPPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLE 296
            ++  +  + +         L     L      +    +S + R +  D  + +K G+ +
Sbjct: 407 YQLQQQSLINQSMQGITQDLLIDEGELEETNEPQNGIPLSTQQR-RRSDSNSQTK-GSFK 464

Query: 297 NTINGGRGGADEENPGPHPIHPGKDISKLLGMTPSD--IDKYSRIVFPVCFVCFNLMYW 353
             +   + G     PG      GKD + L G+   +  I++ SR+ FP+ F  FN ++W
Sbjct: 465 TEVRIAKPG-----PGAR----GKDHALLTGIGDKELAIERVSRVAFPLAFALFN-VHW 513



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/30 (60%), Positives = 22/30 (73%)

Query: 192 ISYVKSIDVYLGTCFVMVFASLLEYATVGY 221
           ISYV S D+Y+  C+V VF +LLEYA V Y
Sbjct: 586 ISYVTSADLYVMVCYVFVFCALLEYAVVHY 615


>SB_31365| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-06)
          Length = 213

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 6/162 (3%)

Query: 75  GYTMRDIRYKWNEGPNSVGVSSEVS----LPQFKVLGHRQRAMEISLTTGNYSRLACEIQ 130
           GY    I Y W EG  + G+    +    +PQ+ ++             GN+S +     
Sbjct: 2   GYDRSHIVYHW-EGNATDGLPFVPNRMRIMPQYSLVRLTLSREWHQYIIGNFSAVVAVFS 60

Query: 131 FVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALP 190
             RS  Y+L  +Y  S +IV ISW+ F +  + T AR+A+G              N+++P
Sbjct: 61  IERSYTYFLTHVYGTSCVIVFISWMGFVIPPDQTAARIAVGVTTLLTQVTVINILNSSMP 120

Query: 191 KISYVKSIDVYLGTCFVMVFASLLEYATVGYM-AKRIQMRKQ 231
           K+SYVKSID +L +C + VF SL+EY  +  +  KR +  +Q
Sbjct: 121 KVSYVKSIDKFLISCLIFVFLSLIEYCVILILDGKRTRRHQQ 162


>SB_13579| Best HMM Match : Neur_chan_memb (HMM E-Value=0.00056)
          Length = 194

 Score = 83.0 bits (196), Expect = 4e-16
 Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 2/128 (1%)

Query: 64  QRATVITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYS 123
           Q+  V+ + +  + + DI Y+W    + + +  E++  +F++   R    ++    G Y+
Sbjct: 19  QQTCVLEILSYSFDINDIDYRWKAKEDLIILDGEMN--EFELKDSRGERKQVEYVIGTYT 76

Query: 124 RLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXX 183
            L  +  F R + Y  IQIY P+ LIV++SW+SFW++++A PARVALG            
Sbjct: 77  HLVAKFVFRRRLAYSFIQIYSPTFLIVVLSWLSFWISKDAVPARVALGITTVLTIVTLMG 136

Query: 184 XXNAALPK 191
               ++PK
Sbjct: 137 SLRNSVPK 144


>SB_50589| Best HMM Match : Neur_chan_memb (HMM E-Value=9.2e-05)
          Length = 131

 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 121 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXX 180
           N+S +       RS  Y+L  +Y  S +IV ISW+ F +  + T AR+A+G         
Sbjct: 2   NFSAVVAVFSIERSYTYFLTHVYGTSCVIVFISWMGFVIPPDQTAARIAVGVTTLLTQVT 61

Query: 181 XXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYM-AKRIQMRKQ 231
                N+++PK+SYVKSID +L +C + VF SL+EY  +  +  KR +  +Q
Sbjct: 62  VINILNSSMPKVSYVKSIDKFLISCLIFVFLSLIEYCVILILDGKRTRRHQQ 113


>SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10)
          Length = 306

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 80  DIRYKWNEGPNSVGVSS-EVSLPQFKVLGHRQRAMEISLTTG--NYSRLACEIQFVRSMG 136
           ++ YKW E    VG+S     + +F+V    +   E   T G  +YS L  +  F R + 
Sbjct: 33  ELVYKWGE-EGRVGMSILNTDMAEFEVTNMERLERETEFTNGLGSYSELILKFTFKRRLV 91

Query: 137 YYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPK 191
           Y L+QIY P+ LIVI+SW SFW+++NA PARVALG               +++PK
Sbjct: 92  YSLLQIYAPTILIVILSWFSFWISKNAIPARVALGATTVLTIVTLNGSLRSSVPK 146



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 325 LLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIY 356
           LL    + IDK S+I+FPV +  FNL+YWI Y
Sbjct: 273 LLSYNSTPIDKASKILFPVFYALFNLVYWIAY 304



 Score = 35.5 bits (78), Expect = 0.071
 Identities = 15/30 (50%), Positives = 21/30 (70%)

Query: 190 PKISYVKSIDVYLGTCFVMVFASLLEYATV 219
           P +SYVK++D YL   F+ VF ++LEY  V
Sbjct: 190 PWVSYVKALDWYLIVSFLFVFGAVLEYVAV 219



 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 6  NISAILDSFSIS--YDKRVRPNYGVGYTMRDIRYHWKDGHSSVGMS 49
          ++S+ ++S + +  YD+R+RP Y   +   ++ Y W +    VGMS
Sbjct: 3  DVSSFMESLTNTSKYDRRLRPLYNDAHVSAELVYKWGE-EGRVGMS 47


>SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12)
          Length = 1286

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 18/151 (11%)

Query: 69   ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
            I L    +   DI YKW++ P S+    +  + +F +  ++  + EI+  T  +      
Sbjct: 963  IALELYTHQYEDIVYKWSQKPISI---YDHFMDEFSIESYKA-SREIARYTSGFK----- 1013

Query: 129  IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
                      ++QIY P+ LIV +SW+SFW+++ A PARV LG                 
Sbjct: 1014 ---------LVLQIYAPTMLIVSLSWLSFWISKEAVPARVTLGVTTILTIVTLIGSFRFQ 1064

Query: 189  LPKISYVKSIDVYLGTCFVMVFASLLEYATV 219
             PK+SY+K+ID +    FV VF + +E+  V
Sbjct: 1065 FPKVSYIKAIDWFFIVSFVFVFGAQIEFIAV 1095


>SB_10099| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.6e-17)
          Length = 629

 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 34/76 (44%), Positives = 42/76 (55%)

Query: 118 TTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 177
           T  N+S L    +  R +GY+LI  YIPS +IVIISW+SFW++    PARVALG      
Sbjct: 508 TARNHSSLVANFRMKRRIGYFLIDTYIPSTIIVIISWISFWIDPETAPARVALGITTVLT 567

Query: 178 XXXXXXXXNAALPKIS 193
                    A LPK S
Sbjct: 568 MTTLISSARANLPKAS 583


>SB_45611| Best HMM Match : p450 (HMM E-Value=0)
          Length = 847

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 31/80 (38%), Positives = 47/80 (58%)

Query: 140 IQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSID 199
           +++Y P+ LIV +SW++FW+ R+A PAR+ L                   PK+SYVK++D
Sbjct: 263 LKVYAPTTLIVALSWLAFWIPRDAVPARITLSVTTILTIVTLMGSFRTQFPKVSYVKAVD 322

Query: 200 VYLGTCFVMVFASLLEYATV 219
           V+L   F+ VF+S LE   V
Sbjct: 323 VFLIVSFLFVFSSALELVLV 342


>SB_8533| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 335

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 29/79 (36%), Positives = 52/79 (65%)

Query: 92  VGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVI 151
           + + +++ +P+F++    +    +  +TGN+S L    +F R + YYL + YIP+ L V+
Sbjct: 15  LSIDNQIKIPKFELSKVLRWENLLKFSTGNFSALTVGFRFRREVYYYLFRFYIPASLTVV 74

Query: 152 ISWVSFWLNRNATPARVAL 170
           +SWVSFW++  ATPAR++L
Sbjct: 75  MSWVSFWISPLATPARISL 93



 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 12/171 (7%)

Query: 194 YVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPECPPVGD 253
           Y  S DVY+  CFV VF  L+EYA V Y+ +  +  K+ F  +  I     L +  P   
Sbjct: 157 YHWSFDVYMMMCFVFVFGCLVEYAAVHYLLRDDKYNKKVFKHLNDINRNPNLNKIAPA-- 214

Query: 254 PHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHS--KGGTLENTINGGRG--GADEE 309
             T S    LS        +  ++ V+F  ++    S  + G  +N+        G   +
Sbjct: 215 --TQSAETALST---QSTDQCTNRSVKFNTNESNRISATRNGWRDNSSMDVEQAWGQPRD 269

Query: 310 NPGPHPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLHVS 360
            P    + P +   K   ++   +D+ SRI+FPV F+ FN +YW++ L+++
Sbjct: 270 PPKASCLSPLRRRLKAKQIS-GKLDEISRILFPVMFILFNTVYWVLNLNMN 319


>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 346

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 3/119 (2%)

Query: 75  GYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRS 134
           GYT  DI+  W      + ++++  + QF +      +  +    GNY+ L+      R 
Sbjct: 212 GYTDNDIKLSWKS--TKILIANK-EMAQFSLGDCVLSSKTMEYVQGNYTLLSASFPMHRR 268

Query: 135 MGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKIS 193
           +GYY IQ+Y+P   +V++SW+ FW+N   T  R+ +G              N+ LPK+S
Sbjct: 269 IGYYAIQMYVPCTFLVMLSWIVFWMNPEETGNRLTVGITTILTIVFLLGYTNSTLPKVS 327


>SB_30690| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-09)
          Length = 193

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 154 WVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASL 213
           WV FW++  + PARV+LG               + LP++ Y+K+IDVYL   F+ VFASL
Sbjct: 2   WVGFWIDERSVPARVSLGITTVLAITTLIFGVQSTLPRVGYIKAIDVYLLGNFLFVFASL 61

Query: 214 LEYATVGYMAKRIQMRKQR 232
           +EYA +  + K  + +KQR
Sbjct: 62  VEYAIMCSIFKTNE-QKQR 79


>SB_31582| Best HMM Match : Neur_chan_memb (HMM E-Value=0.58)
          Length = 253

 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 75  GYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRS 134
           GY+ R I + W  G N++    ++ LPQ+ +              GN+S +     F R+
Sbjct: 38  GYSDRHITFVWELGMNTIPERLKI-LPQYNLKEVALSTTYNVYVVGNWSGVKATFAFERT 96

Query: 135 MGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 171
             Y++  +Y PS +IV+ISW+ F L R+  PAR+ LG
Sbjct: 97  YSYFIYHVYAPSAIIVVISWIGFVLPRDKPPARITLG 133



 Score = 38.3 bits (85), Expect = 0.010
 Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 7  ISAILDSFSISYDKRVRPNYGVGYTMRDIRYHWKDGHSSVGMSNEVQLPQFRV 59
          ++ +L+     YD+RVRP+Y  GY+ R I + W+ G +++    ++ LPQ+ +
Sbjct: 16 VTDVLNDLFSGYDRRVRPHYEDGYSDRHITFVWELGMNTIPERLKI-LPQYNL 67


>SB_19928| Best HMM Match : Neur_chan_memb (HMM E-Value=4e-08)
          Length = 173

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 21/194 (10%)

Query: 170 LGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMR 229
           +G                +LPK+SYVKS++++L  CF+ VF+++LEY+ V Y+  R +++
Sbjct: 1   MGITTVLTMATLIGSARVSLPKVSYVKSLELFLIMCFLFVFSAILEYSFVSYLVFRQRVK 60

Query: 230 KQRFVAIQKIASEKKLPECPPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAH 289
            +   A +++   ++L E  P    + +    T       RP     QE    +  P  H
Sbjct: 61  NREDYAQRELQRSQELIE--PDDGLNPIDPDGT-----DGRPRPEPGQEA---IWIPGKH 110

Query: 290 SKGGTLENTINGGRGGADEENPGPHPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFN 349
                L       +G A    P   P+    D   +  +T   ++   RI FP+ FV  N
Sbjct: 111 QVEAVLTK-----KGVA----PTKKPLDKKNDNHYINLLT--KVEYIFRIAFPLTFVILN 159

Query: 350 LMYWIIYLHVSDVV 363
           + YW+ YL ++++V
Sbjct: 160 VFYWVYYLTIAELV 173


>SB_10344| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 137

 Score = 58.8 bits (136), Expect = 7e-09
 Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 69  ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
           +   +  YT   + + W +G N + + ++  L +F +       ++++   G Y  L   
Sbjct: 23  LVFESFAYTNDHVAFHW-KGRNPITIFNK-ELSEFDMEQWLIEEVDMTYVAGKYRNLKVT 80

Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 171
             F R +G+YLI  Y+P  ++VI+SW+ FW++ ++   R++LG
Sbjct: 81  FIFRRRLGFYLINFYVPCVVMVIMSWIVFWMDSSSIGERISLG 123


>SB_40028| Best HMM Match : Neur_chan_memb (HMM E-Value=2.2)
          Length = 130

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 6/58 (10%)

Query: 307 DEENPGPHPIHPGKDISKLLG-----MTPSDIDKYSRIVFPVCFVCFNLMYWIIYLHV 359
           DE N  P P  P   I+ L G     +  SD+DK++RIVFP+ F+ FN++YW IYL V
Sbjct: 73  DESNV-PTPPKPRLSINDLTGSHEEELHDSDVDKFARIVFPMVFIVFNILYWCIYLKV 129


>SB_49966| Best HMM Match : Neur_chan_memb (HMM E-Value=0.064)
          Length = 100

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 24/79 (30%), Positives = 39/79 (49%)

Query: 154 WVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASL 213
           WV FW++   +  R+ +G              N  LPK+SY K +D YL T F  VF SL
Sbjct: 2   WVVFWMSPENSADRLTVGITTILTIVFLLGYVNGMLPKVSYPKGVDWYLMTSFFFVFMSL 61

Query: 214 LEYATVGYMAKRIQMRKQR 232
           +E   V  +  + + ++++
Sbjct: 62  VECVVVDRLLLKRKAQEEK 80


>SB_10532| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 72

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 19/70 (27%), Positives = 36/70 (51%)

Query: 122 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXX 181
           ++ L     F R + +++   + P+ ++VI+SW  FW++  A PARV+LG          
Sbjct: 3   FASLKAVFSFKRRIEFFIFSAFTPAIILVILSWCCFWISSQAVPARVSLGITTILTTILL 62

Query: 182 XXXXNAALPK 191
               N+ +P+
Sbjct: 63  SSSVNSNMPR 72


>SB_55738| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 108

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 192 ISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQR 232
           +SYVK+ID YL  C + VF S+LEY  V Y+  + +  KQ+
Sbjct: 1   VSYVKAIDWYLLLCLIFVFGSILEYTCVTYVISKKKRIKQK 41


>SB_53446| Best HMM Match : Neur_chan_memb (HMM E-Value=0.038)
          Length = 406

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 192 ISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQR 232
           +SYVK+ID YL  C + VF S+LEY  V Y+  + +  KQ+
Sbjct: 1   VSYVKAIDWYLLLCLIFVFGSILEYTCVTYVISKKKRIKQK 41


>SB_47353| Best HMM Match : Neur_chan_memb (HMM E-Value=3.2)
          Length = 133

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)

Query: 187 AALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQR 232
           + LP++ Y+K+IDVYL   F+ VFASL+EYA +  + K  + +KQR
Sbjct: 1   STLPRVGYIKAIDVYLLGNFLFVFASLVEYAIMCSIFKTNE-QKQR 45


>SB_41127| Best HMM Match : Neur_chan_memb (HMM E-Value=5.9)
          Length = 90

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 20/56 (35%), Positives = 34/56 (60%)

Query: 192 ISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPE 247
           +SYVK++D YL  CF+ VFA LLEY  V Y+      +++R   + + +  +++ E
Sbjct: 1   VSYVKAVDWYLIGCFLFVFAVLLEYTFVLYIDNVHNKKRKRHKHVPRDSQAEEVTE 56


>SB_10741| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.71)
          Length = 281

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/29 (58%), Positives = 21/29 (72%)

Query: 193 SYVKSIDVYLGTCFVMVFASLLEYATVGY 221
           SYV S D+Y+  C+V VF +LLEYA V Y
Sbjct: 171 SYVTSADMYILVCYVFVFCALLEYAVVHY 199


>SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49)
          Length = 679

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 283 VHDPKAHS-KGGTLENTINGGRGGADEENPGPHPIHPGKDI--SKLLGMTPS-DIDKYSR 338
           + + K H+ +    EN       G D++N  P   +   D   +  +   P+  +DKY+R
Sbjct: 21  MEEEKQHTLRANGQENNEGNNAEGEDKDNTPPLKPYYFWDPYEAAFMATEPAYTVDKYAR 80

Query: 339 IVFPVCFVCFNLMYWII 355
           I FPV F   N +YWI+
Sbjct: 81  IYFPVTFAVLNSIYWIV 97


>SB_7114| Best HMM Match : Neur_chan_memb (HMM E-Value=0.058)
          Length = 203

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query: 333 IDKYSRIVFPVCFVCFNLMYWIIYL 357
           +D+Y+RI FP  +  +NL YW +YL
Sbjct: 126 VDRYARICFPFAYFLYNLGYWTVYL 150


>SB_10744| Best HMM Match : 7tm_1 (HMM E-Value=3.2e-22)
          Length = 276

 Score = 36.3 bits (80), Expect = 0.041
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 110 QRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIY--IPSGLIVIISWVSFWLNRNATP 165
           + AM ISL      ++ C IQ+ R MG +++ ++  I   ++ I +W+ + L    TP
Sbjct: 140 ESAMSISLVERGDGKVVCGIQYARRMGIFMMAVFLVILVAMVFIYTWIGYKLWTRHTP 197


>SB_41472| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 125

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 191 KISYVKSIDVYLGTCFVMVFASLLEYATV 219
           ++SYVK++DV+L   FV VF+S LE   V
Sbjct: 49  RVSYVKAVDVFLIVSFVFVFSSALELVLV 77


>SB_55264| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 172

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 333 IDKYSRIVFPVCFVCFNLMYWIIYLH 358
           +DKYSR+VFP+ +  F ++Y+ +  H
Sbjct: 143 LDKYSRLVFPISYAIFLIIYFSVQYH 168


>SB_52529| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
          Length = 415

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 110 QRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS--GLIVIISWVSF 157
           + AM ISL      ++ C IQ+ R MG +++ +++     ++ I +W+ +
Sbjct: 298 ESAMSISLIERGDGKVVCGIQYARRMGIFMMAVFLVMLVAMVFIYTWIGY 347


>SB_14026| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 65

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRI-QMRKQR 232
           +P++SY K ID YL   F+ VF +L+    +  + KR  ++RK R
Sbjct: 1   MPRVSYPKMIDWYLMGSFLFVFTTLIMCLLIYLLDKRTKKVRKDR 45


>SB_4969| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-08)
          Length = 367

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 68  VITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLG 107
           V+   +  +T  +I  +W EG   V +S +++LP F ++G
Sbjct: 278 VLQFESFFHTAAEIVLRWEEGDTPVAISKDMNLPHFDIVG 317



 Score = 29.5 bits (63), Expect = 4.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)

Query: 30  YTMRDIRYHWKDGHSSVGMSNEVQLPQFRVLG 61
           +T  +I   W++G + V +S ++ LP F ++G
Sbjct: 286 HTAAEIVLRWEEGDTPVAISKDMNLPHFDIVG 317


>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
          Length = 1084

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 191  KISYVKSIDVYLGTCFVMVFASLLEYATV 219
            ++SY+KSID ++   F  +FA+L+EY  V
Sbjct: 1031 RVSYMKSIDHFMLISFGFIFAALIEYIIV 1059


>SB_2422| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 232

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 28 VGYTMRDIRYHWKDGHSSVGMSNEVQLPQFR 58
          +GYT+ DIR HWK        + E ++P F+
Sbjct: 23 LGYTVHDIREHWKHHCEEYNAAFEGEIPDFK 53


>SB_20890| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 41

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 6  NISAILDSFSISYDKRVRPNYG 27
          NIS +LD     YDKR+RP YG
Sbjct: 19 NISKLLDDVFKRYDKRIRPYYG 40


>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
          Length = 229

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 6  NISAILDSFSISYDKRVRPNYG 27
          N+S  ++    SYD++VRPNYG
Sbjct: 18 NLSVFINDALASYDRKVRPNYG 39



 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 333 IDKYSRIVFPVCFVCFNLMYWIIYLHVSD 361
           ID+ SRI+FP  +V F + Y   Y++  D
Sbjct: 198 IDRVSRIIFPSAYVIFIICYTAYYVNKRD 226


>SB_34114| Best HMM Match : Transthyretin (HMM E-Value=1.1e-13)
          Length = 626

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 234 VAIQKIASEKKLPECPPVGDPHTLSKMNTLSRCPPSRPSKTISQE--VRFKVHDPKAHSK 291
           + + KI  +K  P CP       LSK+N ++     RP K+ S+E  V +++  P  H+ 
Sbjct: 246 IPLWKIYEKKGNPRCPVATFSKYLSKLNPMNASLWQRPKKSASEEDQVWYEI-SPMGHNT 304

Query: 292 GGTL 295
            G +
Sbjct: 305 LGKM 308


>SB_14632| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.0002)
          Length = 135

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 11/22 (50%), Positives = 17/22 (77%)

Query: 6  NISAILDSFSISYDKRVRPNYG 27
          NI+ +L++    YDKR+RPN+G
Sbjct: 29 NITYLLETLLSGYDKRLRPNFG 50


>SB_18201| Best HMM Match : rve (HMM E-Value=3.6e-21)
          Length = 322

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 265 RCPPSRPSKTISQEVRFKVHDPKAHS--KGGTL 295
           R   S PS  + Q VR KVH  +AHS  K GT+
Sbjct: 267 RTAKSLPSLVVGQPVRVKVHPQQAHSNWKAGTV 299


>SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21)
          Length = 887

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 265 RCPPSRPSKTISQEVRFKVHDPKAHS--KGGTL 295
           R   S PS  + Q VR KVH  +AHS  K GT+
Sbjct: 832 RTAKSLPSLVVGQPVRVKVHPQQAHSNWKAGTV 864


>SB_34848| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 107

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 6  NISAILDSFSISYDKRVRPNYGV 28
          N+S +L      YDKRVRP YG+
Sbjct: 21 NVSRLLGKVFEKYDKRVRPFYGI 43


>SB_46458| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 761

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 269 SRPSKTISQEVRFKVHDPKAHS--KGGT 294
           S PS  + Q++R KVH  +AHS  K GT
Sbjct: 635 SLPSLVVGQQIRVKVHPQQAHSNWKAGT 662


>SB_9067| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 382

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 6   NISAILDSFSISYDKRVRPNYGV 28
           N+S +L      YDKRVRP YG+
Sbjct: 296 NVSRLLGKVFEKYDKRVRPFYGI 318


>SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)
          Length = 355

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 19/93 (20%), Positives = 37/93 (39%)

Query: 122 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXX 181
           Y  ++  I   R   +Y++ + +P+ LI ++++ SF++          +           
Sbjct: 80  YPEISFVIHMQRRSLFYVVNLVLPNFLITLLAFFSFFIPVECGERMSFVITVLLSMTVFL 139

Query: 182 XXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 214
                +  P    V  I VY   C V VF +L+
Sbjct: 140 LLVAESIPPTSEAVPVIGVYYTFCIVEVFLALV 172


>SB_44531| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 288

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 265 RCPPSRPSKTISQEVRFKVHDPKAHS--KGGTL 295
           R   S PS  + Q VR KVH  +AHS  K GT+
Sbjct: 157 RTAKSLPSLVVGQPVREKVHPQQAHSNWKAGTV 189


>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
          Length = 1860

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 233 FVAIQK-IASEKKLPECPPVGDPHTLSKMNTLSRCPPSRPSKTISQEV-RFKVHDPKAHS 290
           FVA +K IA+ ++LP    VG+P   +K +T +R PP  P     + + R  +  P    
Sbjct: 40  FVAEKKRIATRRQLPASMTVGEP---TKSDTRNRRPPPPPPTEAEESISRGSLPAPPVPQ 96

Query: 291 KG 292
           KG
Sbjct: 97  KG 98


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.322    0.137    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,488,451
Number of Sequences: 59808
Number of extensions: 501889
Number of successful extensions: 1136
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1031
Number of HSP's gapped (non-prelim): 102
length of query: 374
length of database: 16,821,457
effective HSP length: 83
effective length of query: 291
effective length of database: 11,857,393
effective search space: 3450501363
effective search space used: 3450501363
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)

- SilkBase 1999-2023 -