Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000568-TA|BGIBMGA000568-PA|IPR006202|Neurotransmitter-
gated ion-channel ligand-binding, IPR006029|Neurotransmitter-gated
ion-channel transmembrane region, IPR006028|Gamma-aminobutyric acid A
receptor, IPR002289|Gamma-aminobutyric-acid A receptor, beta subunit,
IPR006201|Neurotransmitter-gated ion-channel
(374 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 459 e-131
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 436 e-124
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 430 e-122
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 166 2e-43
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 137 1e-34
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 137 1e-34
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 125 5e-31
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 117 1e-28
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 112 5e-27
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 109 4e-26
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 98 9e-23
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 95 9e-22
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 91 1e-20
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 91 1e-20
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 87 2e-19
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 87 2e-19
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 28 0.15
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.4
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 9.8
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 459 bits (1131), Expect = e-131
Identities = 239/308 (77%), Positives = 246/308 (79%), Gaps = 18/308 (5%)
Query: 69 ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
I + + GYTMRDIRYKWNEGPNSVGVS+EVSLPQFKVLGHRQRAMEISLTTGNYSRLACE
Sbjct: 154 IEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 213
Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG NAA
Sbjct: 214 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAA 273
Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPEC 248
LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRK RF QKIA K
Sbjct: 274 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---QKIAESMKTARE 330
Query: 249 PPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGGADE 308
P G P P +T EVRFKVHDPKAHSKGGTLENTIN G ADE
Sbjct: 331 NP-GPPGVPGDHG------DHAPKQT---EVRFKVHDPKAHSKGGTLENTIN---GRADE 377
Query: 309 E-NPGP-HPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLHVSDVVAND 366
E P P H IHPGKDI+KL GMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLH+SDVVA+D
Sbjct: 378 EAAPAPQHLIHPGKDINKLYGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADD 437
Query: 367 LVLLEEDK 374
LVLLEE K
Sbjct: 438 LVLLEEAK 445
Score = 79.4 bits (187), Expect = 5e-17
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 29 GYTMRDIRYHWKDGHSSVGMSNEVQLPQFRVLGHRQRATVITLTTVGYT 77
GYTMRDIRY W +G +SVG+SNEV LPQF+VLGHRQRA I+LTT Y+
Sbjct: 160 GYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYS 208
Score = 54.8 bits (126), Expect = 1e-09
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 1 MFGDVNISAILDSFSISYDKRVRPNYG 27
M DVNISAILDSFS+SYDKRVRPNYG
Sbjct: 6 MLNDVNISAILDSFSVSYDKRVRPNYG 32
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 436 bits (1074), Expect = e-124
Identities = 228/308 (74%), Positives = 238/308 (77%), Gaps = 18/308 (5%)
Query: 69 ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
I + + GYTMRDIRYKWN G SVG+S+EV LPQF+VLGHRQR I L+TGNYSRLACE
Sbjct: 154 IEIESFGYTMRDIRYKWNAGLQSVGISNEVELPQFRVLGHRQRHSTIHLSTGNYSRLACE 213
Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG NAA
Sbjct: 214 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAA 273
Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPEC 248
LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRK RF QKIA K
Sbjct: 274 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---QKIAESMKTARE 330
Query: 249 PPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGGADE 308
P G P P +T EVRFKVHDPKAHSKGGTLENTIN G ADE
Sbjct: 331 NP-GPPGVPGDHG------DHAPKQT---EVRFKVHDPKAHSKGGTLENTIN---GRADE 377
Query: 309 E-NPGP-HPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLHVSDVVAND 366
E P P H IHPGKDI+KL GMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLH+SDVVA+D
Sbjct: 378 EAAPAPQHLIHPGKDINKLYGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADD 437
Query: 367 LVLLEEDK 374
LVLLEE K
Sbjct: 438 LVLLEEAK 445
Score = 75.4 bits (177), Expect = 8e-16
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 29 GYTMRDIRYHWKDGHSSVGMSNEVQLPQFRVLGHRQRATVITLTTVGYT 77
GYTMRDIRY W G SVG+SNEV+LPQFRVLGHRQR + I L+T Y+
Sbjct: 160 GYTMRDIRYKWNAGLQSVGISNEVELPQFRVLGHRQRHSTIHLSTGNYS 208
Score = 54.8 bits (126), Expect = 1e-09
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 1 MFGDVNISAILDSFSISYDKRVRPNYG 27
M DVNISAILDSFS+SYDKRVRPNYG
Sbjct: 6 MLNDVNISAILDSFSVSYDKRVRPNYG 32
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 430 bits (1059), Expect = e-122
Identities = 223/290 (76%), Positives = 227/290 (78%), Gaps = 19/290 (6%)
Query: 69 ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
I + + GYTMRDIRYKWNEGPNSVGVS+EVSLPQFKVLGHRQRAMEISLTTGNYSRLACE
Sbjct: 93 IEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 152
Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG NAA
Sbjct: 153 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAA 212
Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPEC 248
LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRK RF QKIA K
Sbjct: 213 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---QKIAESMKTARE 269
Query: 249 PPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGGADE 308
P G P P Q VRFKVHDPKAHSKGGTLENTIN G ADE
Sbjct: 270 NP-GPPGV----------PGDHGDHAPKQTVRFKVHDPKAHSKGGTLENTIN---GRADE 315
Query: 309 E-NPGP-HPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIY 356
E P P H IHPGKDI+KL GMTPSDIDKYSRIVFPVCFVCFNLMYWIIY
Sbjct: 316 EAAPAPQHLIHPGKDINKLYGMTPSDIDKYSRIVFPVCFVCFNLMYWIIY 365
Score = 79.4 bits (187), Expect = 5e-17
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 29 GYTMRDIRYHWKDGHSSVGMSNEVQLPQFRVLGHRQRATVITLTTVGYT 77
GYTMRDIRY W +G +SVG+SNEV LPQF+VLGHRQRA I+LTT Y+
Sbjct: 99 GYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYS 147
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 166 bits (404), Expect = 2e-43
Identities = 113/314 (35%), Positives = 159/314 (50%), Gaps = 27/314 (8%)
Query: 69 ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
+ + + GYT+ D+ W E P GV E LPQF ++G+ + L TG Y RL+
Sbjct: 177 VEIESYGYTVLDVVMYWKETPVR-GVE-EAELPQFTIIGYETNDRKEKLATGIYQRLSLS 234
Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
+ R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG ++
Sbjct: 235 FKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSS 294
Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYM---AKRIQMRKQRFVAIQKIASEK-- 243
LP+ISYVK+ID+YL CFV VFA+LLEYA V Y A+ + K++ +K+ S K
Sbjct: 295 LPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARAKKKSKKKESDDKKVISSKSG 354
Query: 244 -KLPECPPVGDPHTLSKMNTLSRCP-PSRPSKT-----ISQEVRFKVHDPKAHSKGGTLE 296
K P + ++ L P PS +++ S + HDP +
Sbjct: 355 SKANSPFPGSTEADIIELQDLRMSPLPSIRNRSGLVSGSSTPGTGREHDPAKFPPSFRIS 414
Query: 297 -----NTI--NGG---RGGADEENPGPHPIHPGKDISKLLGMTPSD---IDKYSRIVFPV 343
NT N G RG + H I G I ++ D IDKYSRI+FPV
Sbjct: 415 RVAAYNTYGRNAGLRYRGPKQNKPKVLHAIRRGASILRVSMPKIKDVNIIDKYSRIIFPV 474
Query: 344 CFVCFNLMYWIIYL 357
F+ FN +YWI Y+
Sbjct: 475 SFMLFNAIYWIFYV 488
Score = 32.7 bits (71), Expect = 0.005
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 29 GYTMRDIRYHWKDGHSSVGMSNEVQLPQFRVLGHRQRATVITLTTVGYTMRDIRYK 84
GYT+ D+ +WK+ + V E +LPQF ++G+ L T Y + +K
Sbjct: 183 GYTVLDVVMYWKE--TPVRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFK 236
Score = 23.0 bits (47), Expect = 4.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 4/21 (19%)
Query: 7 ISAILDSFSISYDKRVRPNYG 27
IS ILD YD R+RPN+G
Sbjct: 41 ISRILDG----YDIRLRPNFG 57
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 137 bits (332), Expect = 1e-34
Identities = 95/289 (32%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 69 ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
+ + + G+T D+ + W EG + V V + LP+F + TG YS L +
Sbjct: 176 LRMASYGWTTDDLVFLWKEG-DPVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVD 234
Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
+ F R YYLIQIYIP ++VI+SWVSFWL+++A PARV+LG NA+
Sbjct: 235 LLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINAS 294
Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPEC 248
LP +SY K+ID++ G C VF +LLE+A V Y A R M EKK
Sbjct: 295 LPPVSYTKAIDIWTGVCLTFVFGALLEFALVNY-ASRSDMHSDNI--------EKKY--- 342
Query: 249 PPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGGADE 308
PP + S + P S + + V P E+T++ R E
Sbjct: 343 PPSETEQSTSMDLPSDQVEPDNSSNFAMKPL---VRQP---------EDTMSVDRMQHCE 390
Query: 309 ENPGPHPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYL 357
+ P + + ID SRI FP+ F FNL YW YL
Sbjct: 391 LHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFNLAYWSTYL 439
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 137 bits (332), Expect = 1e-34
Identities = 95/289 (32%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 69 ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 128
+ + + G+T D+ + W EG + V V + LP+F + TG YS L +
Sbjct: 176 LRMASYGWTTDDLVFLWKEG-DPVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVD 234
Query: 129 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAA 188
+ F R YYLIQIYIP ++VI+SWVSFWL+++A PARV+LG NA+
Sbjct: 235 LLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINAS 294
Query: 189 LPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPEC 248
LP +SY K+ID++ G C VF +LLE+A V Y A R M EKK
Sbjct: 295 LPPVSYTKAIDIWTGVCLTFVFGALLEFALVNY-ASRSDMHSDNI--------EKKY--- 342
Query: 249 PPVGDPHTLSKMNTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGGADE 308
PP + S + P S + + V P E+T++ R E
Sbjct: 343 PPSETEQSTSMDLPSDQVEPDNSSNFAMKPL---VRQP---------EDTMSVDRMQHCE 390
Query: 309 ENPGPHPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYL 357
+ P + + ID SRI FP+ F FNL YW YL
Sbjct: 391 LHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFNLAYWSTYL 439
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 125 bits (302), Expect = 5e-31
Identities = 91/303 (30%), Positives = 146/303 (48%), Gaps = 19/303 (6%)
Query: 75 GYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGN--YSRLACEIQFV 132
GYT RD+ YKWN V ++ ++ L QF ++ + S T + YS L
Sbjct: 152 GYTKRDVIYKWNSA-RQVAIAEDMKLSQFDLVANPTANYSASTTLSHAEYSMLLVYFHLQ 210
Query: 133 RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKI 192
R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG LPK+
Sbjct: 211 RHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKV 270
Query: 193 SYVKSIDVYLGTCFVMVFASLLEYATVGYMAK--RIQMRKQRFVAIQKIASEKKLPECPP 250
Y ++D ++ F +FA+++++A V Y K + ++ + +S+++ + P
Sbjct: 271 PYPTALDFFVFLSFAFIFATIIQFAVVHYFTKYGSGECYFSSDLSESETSSDEEEADTRP 330
Query: 251 V-GDPHTLSKM----NTLSRCPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGG 305
+ +P T S N +R PSR + T+S++ +V P + + + +
Sbjct: 331 LKKEPITQSNKRTAGNLATREHPSR-NFTMSEDGMIEV-IPLSAIPEPSKNPAMGHWQMS 388
Query: 306 ADEENPGPHPIHPGKDIS--KLLGMTP-----SDIDKYSRIVFPVCFVCFNLMYWIIYLH 358
+P P P + S + TP S ID+ SRIVFP+ F+ N+ YW YL
Sbjct: 389 CVACSPPPRQTPPSRKESGRRRRRRTPRYNSVSKIDRASRIVFPLFFLAINVFYWFAYLS 448
Query: 359 VSD 361
S+
Sbjct: 449 RSE 451
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 GYTMRDIRYHWKDGHSSVGMSNEVQLPQFRVLGH--RQRATVITLTTVGYTM 78
GYT RD+ Y W V ++ +++L QF ++ + + TL+ Y+M
Sbjct: 152 GYTKRDVIYKWNSAR-QVAIAEDMKLSQFDLVANPTANYSASTTLSHAEYSM 202
Score = 27.9 bits (59), Expect = 0.15
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 6 NISAILDSFSISYDKRVRPNYG 27
NIS +LD+ YD VRP++G
Sbjct: 5 NISELLDNLLRGYDNSVRPDFG 26
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 117 bits (282), Expect = 1e-28
Identities = 58/168 (34%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 56 QFRVLGHRQRATVITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEI 115
+F H + + + ++ +T +D+ + WN V V+ E+ LPQ + + I
Sbjct: 135 KFESYPHDTQICSMMIESLSHTTQDLVFIWNMTDPLV-VNPEIELPQLDISNNYTTDCTI 193
Query: 116 SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXX 175
+TGN++ + R +GY+L YIPS LIV++SW++FW+ A PARV LG
Sbjct: 194 EYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPARVTLGVTSL 253
Query: 176 XXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV-GYM 222
+LP +SYVK+IDV++ +C V VF SL+E+A V YM
Sbjct: 254 LTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNYM 301
Score = 31.9 bits (69), Expect = 0.009
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 333 IDKYSRIVFPVCFVCFNLMYWIIYL 357
IDK SR FP F+ N++YW +L
Sbjct: 359 IDKVSRFFFPFSFLILNVVYWSTFL 383
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 112 bits (269), Expect = 5e-27
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 26/302 (8%)
Query: 76 YTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTT---------GNYSRLA 126
+ + D+ W++ P + ++ E+ L ++K++ + EI TT GN+S ++
Sbjct: 165 HNVLDMVLYWDQEP--IILADELHLTEYKLVEKWVNSSEIFYTTSQQYYGHFAGNFSSIS 222
Query: 127 CEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXN 186
+ R MG++++ YIPS LIV+ISWVSFWL+ +A+P R+ LG
Sbjct: 223 ITFKLAREMGFFMMDYYIPSILIVVISWVSFWLHMDASPPRIVLGTNTILTFMTLASKVE 282
Query: 187 AALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKR---IQMRKQRFVAIQKIASEK 243
+LPK+SY+K+ +++ C + +FA+++E+A V + +R + ++K I K
Sbjct: 283 NSLPKVSYIKASEIWFLGCTIFLFAAMVEFAFVNTIYRRKKTVPLKKVNSKYILKSTLTP 342
Query: 244 KLPECPPVGDPHTLSKMNTLSRCPPSRPS-KTISQEVRFKVHD-PKAHSKGGT-----LE 296
KL + L + + S + + + S + VH P + +
Sbjct: 343 KLARKQFQKNTTGLERSRSWSSLDNTNTNDQDYSSQNYLTVHSFPSTLNIPSVKIDEDQK 402
Query: 297 NTINGGRGGADEENPGPHPIHPG-KDISKLLGMTPSD----IDKYSRIVFPVCFVCFNLM 351
+I +P P P + MTP + ID+ SRIVFPV F+ FN++
Sbjct: 403 CSIESITSVNSTSSPKPFPRRATLAQLHNFTTMTPQEIAQWIDRRSRIVFPVAFIIFNIL 462
Query: 352 YW 353
YW
Sbjct: 463 YW 464
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 109 bits (262), Expect = 4e-26
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 57 FRVLGHRQRATVITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEIS 116
F + H + + + ++ +T ++ ++W+ V V + LPQ +++ +
Sbjct: 167 FLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLV-VDENIELPQLQLVKNYTADCTQV 225
Query: 117 LTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXX 176
+TGN++ L R +GYYL YIP+ LIVI+SWVSFW+ A PARV LG
Sbjct: 226 YSTGNFTCLEVVFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLL 285
Query: 177 XXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 219
A+LP +SY+K++D ++ C V VF +L+EY V
Sbjct: 286 TLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLV 328
Score = 35.5 bits (78), Expect = 7e-04
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 304 GGADEENPGPHPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIY 356
G + + GP P G ++ M +ID+ SR+ FP F N+ YWI++
Sbjct: 375 GRSQKSTTGPPP---GPTPAQKARMRALNIDRVSRVFFPFLFAVLNVTYWIMF 424
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 98.3 bits (234), Expect = 9e-23
Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 69 ITLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGH--RQRAMEISLT-TGNYSRL 125
I + + Y + +R +W G +V V+ E+ L Q+ + + ++ L +GN+SRL
Sbjct: 132 IYIESFSYHKQKLRLRWGTG--AVTVNPELKLLQYDIGKPVVAEETVDYMLEKSGNFSRL 189
Query: 126 ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXX 185
+F R +G++LIQ + PS L+V++SW SFWL +A P RVAL
Sbjct: 190 VVFFRFERQIGHHLIQTFAPSTLVVMLSWFSFWLGLDAIPGRVALLVTSMLTLVTMFTGL 249
Query: 186 NAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQM 228
+ +P ++YVK++DV++ C + VFA+L E+ V + R Q+
Sbjct: 250 KSDIPPVAYVKALDVWMAGCMMFVFAALGEFVVVKVLDLRSQL 292
Score = 33.9 bits (74), Expect = 0.002
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 333 IDKYSRIVFPVCFVCFNLMYWIIYL 357
ID YSRI FP+ F+ F ++YW I L
Sbjct: 362 IDIYSRIGFPILFMLFIILYWPILL 386
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 95.1 bits (226), Expect = 9e-22
Identities = 47/127 (37%), Positives = 66/127 (51%)
Query: 98 VSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSF 157
++L QF ++G R + G +S L R GY+LIQ+Y+P LIV++SWVSF
Sbjct: 207 MALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSF 266
Query: 158 WLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYA 217
W++R AT RV LG LPK+ Y ++D +L F A+LLE+A
Sbjct: 267 WIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLLEFA 326
Query: 218 TVGYMAK 224
V Y K
Sbjct: 327 GVHYFTK 333
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 331 SDIDKYSRIVFPVCFVCFNLMYWIIYL 357
S IDK +RIVFP F N+ YW+IY+
Sbjct: 466 SYIDKVARIVFPASFGLLNICYWVIYV 492
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 91.1 bits (216), Expect = 1e-20
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 2/200 (1%)
Query: 71 LTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLT-TGNYSRLACEI 129
+ ++ Y I Y W ++ S ++ ++ ++ I ++ GNYS L ++
Sbjct: 255 IESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKVDL 314
Query: 130 QFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAAL 189
F R +Y ++IP ++V S+++FWL NA PARV +G + L
Sbjct: 315 IFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTL 374
Query: 190 PKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPECP 249
P +S + +++V+ G C ++ASLLE+ V Y+ ++ M + + ++K+ P
Sbjct: 375 PVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVYRPGENPVTQKR-EGGP 433
Query: 250 PVGDPHTLSKMNTLSRCPPS 269
P G +++ T + C P+
Sbjct: 434 PTGATTGPNEIVTCTNCGPN 453
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 91.1 bits (216), Expect = 1e-20
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 2/200 (1%)
Query: 71 LTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLT-TGNYSRLACEI 129
+ ++ Y I Y W ++ S ++ ++ ++ I ++ GNYS L ++
Sbjct: 204 IESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKVDL 263
Query: 130 QFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAAL 189
F R +Y ++IP ++V S+++FWL NA PARV +G + L
Sbjct: 264 IFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTL 323
Query: 190 PKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPECP 249
P +S + +++V+ G C ++ASLLE+ V Y+ ++ M + + ++K+ P
Sbjct: 324 PVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVYRPGENPVTQKR-EGGP 382
Query: 250 PVGDPHTLSKMNTLSRCPPS 269
P G +++ T + C P+
Sbjct: 383 PTGATTGPNEIVTCTNCGPN 402
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 87.4 bits (207), Expect = 2e-19
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 24/289 (8%)
Query: 71 LTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLT-TGNYSRLACEI 129
+ ++ Y I Y W ++ S ++ ++ ++ I ++ GNYS L ++
Sbjct: 204 IESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKVDL 263
Query: 130 QFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAAL 189
F R +Y ++IP ++V S+++FWL NA PARV +G + L
Sbjct: 264 IFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTL 323
Query: 190 PKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKIASEKKLPECP 249
P +S + +++V+ G C ++ASLLE+ V Y+ ++ M + + P
Sbjct: 324 PVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHN----VVYRPGENPVTQRLP 379
Query: 250 PVGDPHTLSKMNTLSR--CPPSRPSKTISQEVRFKVHDPKAHSKGGTLENTINGGRGGAD 307
V + + L R PP+ + ++ V P T NG
Sbjct: 380 AVLSRIGIILASPLKREGGPPTGATTGPNEIVTCTNCGPNP-----CTHTTTNGCTAELR 434
Query: 308 EENPGPHPIHPGKDISKLLGMTPSDIDKYSRIVFPVCFVCFNLMYWIIY 356
++ P PHPI K ID +RI FPV + F ++I Y
Sbjct: 435 KKEP-PHPIRVAK-----------TIDVIARITFPVAYFMFLTFFFIHY 471
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 87.0 bits (206), Expect = 2e-19
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Query: 120 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 179
GNYS L ++ F R +Y ++IP ++V S+++FWL NA PARV +G
Sbjct: 285 GNYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFF 344
Query: 180 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFVAIQKI 239
+ LP +S + +++V+ G C ++ASLLE+ V Y+ ++ M + +
Sbjct: 345 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVYRPGENP 404
Query: 240 ASEKKLPECPPVGDPHTLSKMNTLSRCPPS 269
++K+ PP G +++ T + C P+
Sbjct: 405 VTQKR-EGGPPTGATTGPNEIVTCTNCGPN 433
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 27.9 bits (59), Expect = 0.15
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 241 SEKKLPECPPVGDPHTLSKMNTLSRC 266
+++ L EC P+ DP+ L K++ + C
Sbjct: 97 ADQLLAECSPISDPNALIKISKILEC 122
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 7.4
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 26 YGVGYTMRDIRYHWKDGHS 44
Y T I HWK GH+
Sbjct: 1411 YVTSSTSSSILLHWKSGHN 1429
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 7.4
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 26 YGVGYTMRDIRYHWKDGHS 44
Y T I HWK GH+
Sbjct: 1407 YVTSSTSSSILLHWKSGHN 1425
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 9.8
Identities = 10/48 (20%), Positives = 20/48 (41%)
Query: 122 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVA 169
Y + E R G IP+ +++++ WL+ +T +A
Sbjct: 239 YPMIVYEFSISRHYGILHATYVIPAVTMMLLTLTVLWLDSRSTERMIA 286
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.137 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,145
Number of Sequences: 429
Number of extensions: 4371
Number of successful extensions: 57
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 42
length of query: 374
length of database: 140,377
effective HSP length: 59
effective length of query: 315
effective length of database: 115,066
effective search space: 36245790
effective search space used: 36245790
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)
- SilkBase 1999-2023 -