Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000567-TA|BGIBMGA000567-PA|IPR001320|Ionotropic
glutamate receptor, IPR001828|Extracellular ligand-binding receptor
(500 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g32390.1 68415.m03958 glutamate receptor family protein (GLR3... 69 7e-12
At1g05200.1 68414.m00524 glutamate receptor family protein (GLR3... 67 2e-11
At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3... 59 6e-09
At3g51480.1 68416.m05638 glutamate receptor family protein (GLR3... 58 1e-08
At2g29100.1 68415.m03537 glutamate receptor family protein (GLR2... 56 7e-08
At2g24720.1 68415.m02953 glutamate receptor family protein (GLR2... 54 3e-07
At4g35290.2 68417.m05015 glutamate receptor family protein (GLR3... 53 4e-07
At4g35290.1 68417.m05014 glutamate receptor family protein (GLR3... 53 4e-07
At2g29110.1 68415.m03538 glutamate receptor family protein (GLR2... 53 5e-07
At1g42540.1 68414.m04905 glutamate receptor family protein (GLR3... 53 5e-07
At2g32400.1 68415.m03959 glutamate receptor family protein (GLR3... 50 5e-06
At2g24710.1 68415.m02952 glutamate receptor family protein (GLR2... 46 6e-05
At2g29120.1 68415.m03539 glutamate receptor family protein (GLR2... 44 2e-04
At5g48400.2 68418.m05985 glutamate receptor family protein (GLR1... 43 4e-04
At5g48400.1 68418.m05984 glutamate receptor family protein (GLR1... 43 4e-04
At5g48410.1 68418.m05986 glutamate receptor family protein (GLR1... 43 5e-04
At3g04110.1 68416.m00435 glutamate receptor family protein (GLR1... 42 7e-04
At5g11210.1 68418.m01310 glutamate receptor family protein (GLR2... 42 0.001
At5g11180.1 68418.m01307 glutamate receptor family protein (GLR2... 39 0.009
At5g27100.1 68418.m03235 glutamate receptor family protein (GLR2... 35 0.11
At3g07520.1 68416.m00896 glutamate receptor family protein (GLR1... 35 0.11
At5g54250.2 68418.m06758 cyclic nucleotide-regulated ion channel... 31 1.3
At5g54250.1 68418.m06757 cyclic nucleotide-regulated ion channel... 31 1.3
At5g15410.2 68418.m01803 cyclic nucleotide-regulated ion channel... 31 1.3
At5g15410.1 68418.m01804 cyclic nucleotide-regulated ion channel... 31 1.3
At4g11900.1 68417.m01893 S-locus lectin protein kinase family pr... 30 4.1
At2g17110.1 68415.m01974 expressed protein 30 4.1
At5g36970.1 68418.m04433 harpin-induced protein-related / HIN1-r... 29 9.4
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 29 9.4
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 29 9.4
At1g36980.1 68414.m04610 expressed protein 29 9.4
At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase fami... 29 9.4
>At2g32390.1 68415.m03958 glutamate receptor family protein (GLR3.5)
plant glutamate receptor family, PMID:11379626
Length = 895
Score = 68.9 bits (161), Expect = 7e-12
Identities = 81/327 (24%), Positives = 140/327 (42%), Gaps = 49/327 (14%)
Query: 199 FEHGDKISRLIKKTDIEGLTGNISFNEEGHRYNFTLNVVEMTVQSAMLKVATWSDVRGLQ 258
F G++ ++I + + GLTG I FN E +R N +++ + + L+V WS+ G
Sbjct: 325 FNEGERFLQVILEMNYTGLTGQIEFNSEKNRINPAYDILNIK-STGPLRVGYWSNHTGFS 383
Query: 259 LVSQKHVQLK----SPASYDINRTYIVTTVLQEP--YLMP---KPFEFGQKEE-QFHGFC 308
+ + + K S +N V++ P ++ P KP + G + +
Sbjct: 384 VAPPETLYSKPSNTSAKDQRLNEIIWPGEVIKPPRGWVFPENGKPLKIGVPNRVSYKNYA 443
Query: 309 -KDLADLVAKRLGIK-YELRITK---DNRKTEELFSEGSSR-----LVDDIVRKDADIAV 358
KD L K I +E I +T L+ +G L+ ++ D+AV
Sbjct: 444 SKDKNPLGVKGFCIDIFEAAIQLLPYPVPRTYILYGDGKKNPSYDNLISEVAANIFDVAV 503
Query: 359 APLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKE------------ 406
+ + R + +DF++PF+ + + ++ +SFLKP + E
Sbjct: 504 GDVTIITNRTKFVDFTQPFIESGLVVV-APVKGAKSSPWSFLKPFTIEMWAVTGALFLFV 562
Query: 407 ---IWIILH---NEF------SIWNSFWFSLGS-FMQQGSDVVPKSLSGRIVGTVWWFFA 453
IWI+ H EF I FWFS + F + V S GR V VW F
Sbjct: 563 GAVIWILEHRFNEEFRGPPRRQIITVFWFSFSTMFFSHRENTV--STLGRFVLLVWLFVV 620
Query: 454 LILVCSYTANLAAYLIVERIAAPMQSI 480
LI+ SYTA+L + L V+++ + ++ +
Sbjct: 621 LIINSSYTASLTSILTVQQLTSRIEGM 647
>At1g05200.1 68414.m00524 glutamate receptor family protein (GLR3.4)
plant glutamate receptor family, PMID:11379626
Length = 959
Score = 67.3 bits (157), Expect = 2e-11
Identities = 82/354 (23%), Positives = 150/354 (42%), Gaps = 64/354 (18%)
Query: 199 FEHGDKISRLIKKTDIEGLTGNISFNEEGHRYNFTLNVVEMTVQSAMLKVATWSDVRGLQ 258
F G+K ++I + G+TG I F+ + +R N V+ + +A V WS+ GL
Sbjct: 390 FNEGEKFMKIILGMNHTGVTGPIQFDSDRNRVNPAYEVLNLE-GTAPRTVGYWSNHSGLS 448
Query: 259 LVSQKHVQLKSPASYDINRTY---IVTTVLQEP---YLMP---KPFEFG----------- 298
+V + + + P + N+ I + +P ++ P KP G
Sbjct: 449 VVHPETLYSRPPNTSTANQRLKGIIYPGEVTKPPRGWVFPNNGKPLRIGVPNRVSYTDYV 508
Query: 299 QKEEQ---FHGFCKDLADLVAKRLGIKYELRITKDNRKTEELFSEGS-----SRLVDDIV 350
K++ G+C D+ + + L Y + +T L+ +G LV+++V
Sbjct: 509 SKDKNPPGVRGYCIDVFEAAIELL--PYPVP------RTYILYGDGKRNPSYDNLVNEVV 560
Query: 351 RKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWII 410
+ D+AV + + R R +DF++PF+ + + +++ +SFLKP + E+W +
Sbjct: 561 ADNFDVAVGDITIVTNRTRYVDFTQPFIESGLVVV-APVKEAKSSPWSFLKPFTIEMWAV 619
Query: 411 LHNEF-----SIW-------------------NSFWFSLGSFMQQGSDVVPKSLSGRIVG 446
F +W FWFS + + SL GR V
Sbjct: 620 TGGFFLFVGAMVWILEHRFNQEFRGPPRRQLITIFWFSFSTMFFSHRENTVSSL-GRFVL 678
Query: 447 TVWWFFALILVCSYTANLAAYLIVERIAAPMQSI-SYTSTLPNIEVRANALLRN 499
+W F LI+ SYTA+L + L + ++ + ++ I S ++ I V+ RN
Sbjct: 679 IIWLFVVLIINSSYTASLTSILTIRQLTSRIEGIDSLVTSNEPIGVQDGTFARN 732
>At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3.1)
(GLR2) identical to putative glutamate receptor GLR2
[Arabidopsis thaliana] gi|4185740|gb|AAD09174; plant
glutamate receptor family, PMID:11379626
Length = 951
Score = 59.3 bits (137), Expect = 6e-09
Identities = 72/331 (21%), Positives = 140/331 (42%), Gaps = 55/331 (16%)
Query: 199 FEHGDKISRLIKKTDIEGLTGNISFNEEGHRYNFTLNVVEMTVQSAMLKVATWSDVRGLQ 258
F+ G ++ I T + GLTG + F+ + + +++ + V + ++ WS+ GL
Sbjct: 392 FDQGSQLLDYIVHTKMSGLTGPVQFHPDRSMLQPSYDIINL-VDDRVHQIGYWSNYSGLS 450
Query: 259 LVSQKHVQLKSPASYDINRTYIVTTVLQEPYLMPKPFEF---GQK--------------- 300
+V + K P N+ T + P+ + F G++
Sbjct: 451 IVPPESFYSKPPNRSSSNQHLNSVTWPGGTSVTPRGWIFRNNGRRLRIGVPDRASFKDFV 510
Query: 301 ------EEQFHGFCKDLADLVAKRLG--IKYELRITKDNRKTEELFSEGSSRLVDDIVRK 352
+ G+C D+ + K L + +E D T ++E +++ +
Sbjct: 511 SRVNGSSNKVQGYCIDVFEAAVKLLSYPVPHEFIFFGDGL-TNPNYNELVNKVTTGV--- 566
Query: 353 DADIAVAPLAVTPERERVLDFSEPFLS----VDVPIT--HKKLQKQLKD--------TFS 398
D D V +A+ +R R++DF++P++ V P+T ++ L+ T S
Sbjct: 567 DFDAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAPVTRLNENPWAFLRPFTLPMWAVTAS 626
Query: 399 FLKPLSKEIWIILH---NEF------SIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVW 449
F + IWI+ H +EF I WF+ + + +L GR+V +W
Sbjct: 627 FFVIVGAAIWILEHRINDEFRGPPRRQIITILWFTFSTMFFSHRETTVSTL-GRMVLLIW 685
Query: 450 WFFALILVCSYTANLAAYLIVERIAAPMQSI 480
F LI+ SYTA+L + L V+++ +P++ +
Sbjct: 686 LFVVLIITSSYTASLTSILTVQQLNSPIKGV 716
>At3g51480.1 68416.m05638 glutamate receptor family protein (GLR3.6)
plant glutamate receptor family, PMID:11379626
Length = 903
Score = 58.0 bits (134), Expect = 1e-08
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 342 SSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLK 401
+S LV I D V + + ER ++ DF++P++ + + ++K +FL+
Sbjct: 515 NSELVRLITTGVYDAGVGDITIITERTKMADFTQPYVESGLVVV-APVRKLGSSAMAFLR 573
Query: 402 PLSKEIWIIL-----------------HN-EF------SIWNSFWFSLGSFMQQGSDVVP 437
P + ++W+I HN EF + +FWFS + +
Sbjct: 574 PFTPQMWLIAAASFLIVGAVIWCLEHKHNDEFRGPPRRQVITTFWFSFSTLFFSHRETTT 633
Query: 438 KSLSGRIVGTVWWFFALILVCSYTANLAAYLIVERIAAPMQSISYTST 485
+L GRIV +W F LI+ SYTA+L + L V ++++P++ I T
Sbjct: 634 SNL-GRIVLIIWLFVVLIINSSYTASLTSILTVHQLSSPIKGIETLQT 680
>At2g29100.1 68415.m03537 glutamate receptor family protein (GLR2.9)
plant glutamate receptor family, PMID:11379626
Length = 940
Score = 55.6 bits (128), Expect = 7e-08
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 25/163 (15%)
Query: 343 SRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKP 402
+ LV + K D V + +T R DF+ PF V + + KDT+ FL+P
Sbjct: 505 NNLVYQVYDKTWDAVVGDITITANRSLYADFTLPFTESGVSMMVPVRDNENKDTWVFLEP 564
Query: 403 LSKEIWIIL---------------HN---------EFSIWNSFWFSLGSFMQQGSDVVPK 438
S E+W+ H ++ I S WFS + + + V
Sbjct: 565 WSLELWVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQYQIGTSLWFSFSTMVFAHRENVVS 624
Query: 439 SLSGRIVGTVWWFFALILVCSYTANLAAYLIVERIAAPMQSIS 481
+L+ R V VW F L+L SYTA+L ++L V+ + + +++
Sbjct: 625 NLA-RFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVN 666
>At2g24720.1 68415.m02953 glutamate receptor family protein (GLR2.2)
plant glutamate receptor family, PMID:11379626
Length = 920
Score = 53.6 bits (123), Expect = 3e-07
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 26/200 (13%)
Query: 306 GFCKDLADLVAKRLGIKYELRITKDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLAVTP 365
GFC D + V + + + E + LV + D V +
Sbjct: 483 GFCIDFFEAVIQAMPYDVSYEFFPFEKPNGEPAGNHND-LVHQVYLGQFDAVVGDTTILA 541
Query: 366 ERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIILHNEF-----SIW-- 418
R +DF+ PF+ V + + +D FSFLKPLS E+W+ F S+W
Sbjct: 542 NRSSFVDFTLPFMKSGVGLIVPLKDEVKRDKFSFLKPLSIELWLTTLVFFFLVGISVWTL 601
Query: 419 ----NS-------------FWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYT 461
NS FWF+ + + + V S R + W+F L+L SYT
Sbjct: 602 EHRVNSDFRGPANYQASTIFWFAFSTMVFAPRERV-LSFGARSLVVTWYFVLLVLTQSYT 660
Query: 462 ANLAAYLIVERIAAPMQSIS 481
A+LA+ L +++ + S+S
Sbjct: 661 ASLASLLTSQQLNPTITSMS 680
>At4g35290.2 68417.m05015 glutamate receptor family protein (GLR3.2)
(GLUR2) identical to putative glutamate receptor
like-protein GLUR2 [Arabidopsis thaliana]
gi|13160471|gb|AAK13248; plant glutamate receptor
family, PMID:11379626
Length = 912
Score = 53.2 bits (122), Expect = 4e-07
Identities = 70/333 (21%), Positives = 140/333 (42%), Gaps = 61/333 (18%)
Query: 199 FEHGDKISRLIKKTDIEGLTGNISFNEEGHRYNFTLNVVEMTVQSAMLKVATWSDVRGLQ 258
F+ G + I T++ G+TG I F + + +++ + V ++ WS+ GL
Sbjct: 364 FDQGSQFLDYIVNTNMTGVTGQIQFLPDRSMIQPSYDIINV-VDDGFRQIGYWSNHSGLS 422
Query: 259 LVSQ----KHVQLKSPASYDINRTYIVTTVLQEP--YLMPK---------PFEFGQKE-- 301
++ K + +S ++ +N + P ++ P P KE
Sbjct: 423 IIPPESLYKKLSNRSSSNQHLNNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFV 482
Query: 302 ------EQFHGFCKDLADLVAKRLG--IKYELRITKDNRKTEELFSEGSSRLVDDIVRKD 353
+ G+ D+ + K + + +E + D K F+E V+++
Sbjct: 483 SRLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPN-FNE----FVNNVTIGV 537
Query: 354 ADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDT-FSFLKPLSKEIWII-- 410
D V +A+ +R R++DF++P++ + + +L DT ++FL+P + +W +
Sbjct: 538 FDAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAP--VTKLNDTPWAFLRPFTPPMWAVTA 595
Query: 411 ----------------LHNEF------SIWNSFWFSLGS-FMQQGSDVVPKSLSGRIVGT 447
+++EF I WFS + F + V S GR V
Sbjct: 596 AFFLIVGSVIWILEHRINDEFRGPPRKQIVTILWFSFSTMFFSHRENTV--STLGRAVLL 653
Query: 448 VWWFFALILVCSYTANLAAYLIVERIAAPMQSI 480
+W F LI+ SYTA+L + L V+++ +P++ +
Sbjct: 654 IWLFVVLIITSSYTASLTSILTVQQLNSPIRGV 686
>At4g35290.1 68417.m05014 glutamate receptor family protein (GLR3.2)
(GLUR2) identical to putative glutamate receptor
like-protein GLUR2 [Arabidopsis thaliana]
gi|13160471|gb|AAK13248; plant glutamate receptor
family, PMID:11379626
Length = 912
Score = 53.2 bits (122), Expect = 4e-07
Identities = 70/333 (21%), Positives = 140/333 (42%), Gaps = 61/333 (18%)
Query: 199 FEHGDKISRLIKKTDIEGLTGNISFNEEGHRYNFTLNVVEMTVQSAMLKVATWSDVRGLQ 258
F+ G + I T++ G+TG I F + + +++ + V ++ WS+ GL
Sbjct: 364 FDQGSQFLDYIVNTNMTGVTGQIQFLPDRSMIQPSYDIINV-VDDGFRQIGYWSNHSGLS 422
Query: 259 LVSQ----KHVQLKSPASYDINRTYIVTTVLQEP--YLMPK---------PFEFGQKE-- 301
++ K + +S ++ +N + P ++ P P KE
Sbjct: 423 IIPPESLYKKLSNRSSSNQHLNNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFV 482
Query: 302 ------EQFHGFCKDLADLVAKRLG--IKYELRITKDNRKTEELFSEGSSRLVDDIVRKD 353
+ G+ D+ + K + + +E + D K F+E V+++
Sbjct: 483 SRLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPN-FNE----FVNNVTIGV 537
Query: 354 ADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDT-FSFLKPLSKEIWII-- 410
D V +A+ +R R++DF++P++ + + +L DT ++FL+P + +W +
Sbjct: 538 FDAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAP--VTKLNDTPWAFLRPFTPPMWAVTA 595
Query: 411 ----------------LHNEF------SIWNSFWFSLGS-FMQQGSDVVPKSLSGRIVGT 447
+++EF I WFS + F + V S GR V
Sbjct: 596 AFFLIVGSVIWILEHRINDEFRGPPRKQIVTILWFSFSTMFFSHRENTV--STLGRAVLL 653
Query: 448 VWWFFALILVCSYTANLAAYLIVERIAAPMQSI 480
+W F LI+ SYTA+L + L V+++ +P++ +
Sbjct: 654 IWLFVVLIITSSYTASLTSILTVQQLNSPIRGV 686
>At2g29110.1 68415.m03538 glutamate receptor family protein (GLR2.8)
(GLUR9) plant glutamate receptor family, PMID:11379626
Length = 947
Score = 52.8 bits (121), Expect = 5e-07
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 347 DDIVRK----DADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKP 402
DD+V K D V + +T R DF+ P+ V + + K+T+ FLKP
Sbjct: 516 DDLVYKVDNGTLDAVVGDVTITAYRSLYADFTLPYTESGVSMMVPVRDNENKNTWVFLKP 575
Query: 403 LSKEIWII------------------LHNEF------SIWNSFWFSLGSFMQQGSDVVPK 438
++W+ ++ +F I SFWFS + + + V
Sbjct: 576 WGLDLWVTTACFFVLIGFVVWLFEHRVNTDFRGPPHHQIGTSFWFSFSTMVFAHREKVVS 635
Query: 439 SLSGRIVGTVWWFFALILVCSYTANLAAYLIVER 472
+L+ R V VW F L+L SYTANL ++L V+R
Sbjct: 636 NLA-RFVVVVWCFVVLVLTQSYTANLTSFLTVQR 668
>At1g42540.1 68414.m04905 glutamate receptor family protein (GLR3.3)
plant glutamate receptor family, PMID:11379626
Length = 933
Score = 52.8 bits (121), Expect = 5e-07
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 301 EEQFHGFCKDLADLVAKRLGIKYELRITKDNRKTEELFSEGSSRLVDDIVRKDADIAVAP 360
E F GFC D+ L ++ E + + +V+ I + D V
Sbjct: 487 ENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKE---NPSYTHMVEMITTGNFDGVVGD 543
Query: 361 LAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSK--------------- 405
+A+ R +++DF++P+ + + + +K ++FL+P ++
Sbjct: 544 VAIVTNRTKIVDFTQPYAASGLVVV-APFKKLNSGAWAFLRPFNRLMWAVTGCCFLFVGI 602
Query: 406 EIWIILH---NEF------SIWNSFWFSLGS-FMQQGSDVVPKSLSGRIVGTVWWFFALI 455
+WI+ H +EF WFS + F + V S GR+V +W F LI
Sbjct: 603 VVWILEHRTNDEFRGPPKRQCVTILWFSFSTMFFAHRENTV--STLGRLVLIIWLFVVLI 660
Query: 456 LVCSYTANLAAYLIVERIAAPMQSI 480
+ SYTA+L + L V+++++P++ I
Sbjct: 661 INSSYTASLTSILTVQQLSSPIKGI 685
>At2g32400.1 68415.m03959 glutamate receptor family protein (GLR3.7)
(GLR5) identical to Glr5 [Arabidopsis thaliana]
gi|6644388|gb|AAF21042; plant glutamate receptor family,
PMID:11379626
Length = 921
Score = 49.6 bits (113), Expect = 5e-06
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 355 DIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIILHNE 414
D AV +A+ P R +++DFS+P+ S + + T+ FL+P + +W ++
Sbjct: 531 DAAVGDIAIVPSRSKLVDFSQPYASTGLVVVIPANDDNA--TWIFLRPFTSRLWCVVLVS 588
Query: 415 F-----SIW-------------------NSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWW 450
F IW FS + ++ + +L+ R+V VW
Sbjct: 589 FLVIAVVIWILEHRINEDFRGPPRRQLSTMLLFSFSTLFKRNQEDTISNLA-RLVMIVWL 647
Query: 451 FFALILVCSYTANLAAYLIVERIAAPMQSI 480
F ++L SYTANL + L V+++ + + I
Sbjct: 648 FLLMVLTASYTANLTSILTVQQLPSAITGI 677
>At2g24710.1 68415.m02952 glutamate receptor family protein (GLR2.3)
plant glutamate receptor family, PMID:11379626
Length = 895
Score = 46.0 bits (104), Expect = 6e-05
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 32/203 (15%)
Query: 306 GFCKDLADLVAKRL--GIKYE-LRITKDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLA 362
GFC D + V + L + YE + K + KT +++ LV + D V
Sbjct: 483 GFCIDFFEAVIRELPYDVSYEFIPFEKPDGKTAGNYND----LVYQVYLGRYDAVVGDTT 538
Query: 363 VTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIILHNEF-----SI 417
+ R +DF+ PF+ V + + +D F+KPLS ++W+ F ++
Sbjct: 539 ILVNRSSYVDFTFPFIKSGVGLIVEMTDPVKRDYILFMKPLSWKLWLTSFISFFLVGCTV 598
Query: 418 W-------------------NSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVC 458
W WF+ + + + V S R + W+F L+L
Sbjct: 599 WVLEYKRNPDFSGPPRFQASTICWFAFSTMVFAPRERV-FSFWARALVIAWYFLVLVLTQ 657
Query: 459 SYTANLAAYLIVERIAAPMQSIS 481
SYTA+LA+ L +++ + S+S
Sbjct: 658 SYTASLASLLTSQKLNPTITSMS 680
>At2g29120.1 68415.m03539 glutamate receptor family protein (GLR2.7)
plant glutamate receptor family, PMID:11379626
Length = 926
Score = 44.4 bits (100), Expect = 2e-04
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 27/156 (17%)
Query: 340 EGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSF 399
E +V + D V + + R +DF+ P+ V + K K+T+ F
Sbjct: 494 ENYDEMVYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESGVSMMVPL--KDNKNTWVF 551
Query: 400 LKPLSKEIWI-----ILHNEFSIW-------------------NSFWFSLGSFMQQGSDV 435
L+P S ++W+ + F +W SFWF+ + +
Sbjct: 552 LRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGTSFWFAFSTMNFAHREK 611
Query: 436 VPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVE 471
V +L+ R V VW F L+L+ SYTANL ++ V+
Sbjct: 612 VVSNLA-RFVVLVWCFVVLVLIQSYTANLTSFFTVK 646
>At5g48400.2 68418.m05985 glutamate receptor family protein (GLR1.2)
plant glutamate receptor family, PMID:11379626
Length = 867
Score = 43.2 bits (97), Expect = 4e-04
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 29/143 (20%)
Query: 355 DIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWI----- 409
D AV + +T +R +DF+ P+ + + I K + + F +PL+ +WI
Sbjct: 515 DAAVGDITITSDRSMYVDFTLPYTEMGLGIVAAKERSM----WVFFQPLTPNLWITSAAF 570
Query: 410 -IL------------HNEFS-IWNS-----FWFSLGSFMQQGSDVVPKSLSGRIVGTVWW 450
+L + EF W WF + + + + +LS R V TVW
Sbjct: 571 FVLTGIIVWLIERAENKEFQGSWPQQIGVVIWFGFSTLVYAHREKLQHNLS-RFVVTVWV 629
Query: 451 FFALILVCSYTANLAAYLIVERI 473
F LILV SYTA L + + V++I
Sbjct: 630 FAVLILVTSYTATLTSMMTVQQI 652
>At5g48400.1 68418.m05984 glutamate receptor family protein (GLR1.2)
plant glutamate receptor family, PMID:11379626
Length = 750
Score = 43.2 bits (97), Expect = 4e-04
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 29/143 (20%)
Query: 355 DIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWI----- 409
D AV + +T +R +DF+ P+ + + I K + + F +PL+ +WI
Sbjct: 515 DAAVGDITITSDRSMYVDFTLPYTEMGLGIVAAKERSM----WVFFQPLTPNLWITSAAF 570
Query: 410 -IL------------HNEFS-IWNS-----FWFSLGSFMQQGSDVVPKSLSGRIVGTVWW 450
+L + EF W WF + + + + +LS R V TVW
Sbjct: 571 FVLTGIIVWLIERAENKEFQGSWPQQIGVVIWFGFSTLVYAHREKLQHNLS-RFVVTVWV 629
Query: 451 FFALILVCSYTANLAAYLIVERI 473
F LILV SYTA L + + V++I
Sbjct: 630 FAVLILVTSYTATLTSMMTVQQI 652
>At5g48410.1 68418.m05986 glutamate receptor family protein (GLR1.3)
plant glutamate receptor family, PMID:11379626
Length = 860
Score = 42.7 bits (96), Expect = 5e-04
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 29/143 (20%)
Query: 355 DIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWI----- 409
D AV + +T R +DF+ PF + + I K + + F +PL+ ++WI
Sbjct: 512 DAAVGDITITSNRSTYVDFTLPFTEMGLGIVAVK----ERSMWVFFQPLTPDLWITSAFF 567
Query: 410 -IL------------HNEF-SIWNS-----FWFSLGSFMQQGSDVVPKSLSGRIVGTVWW 450
+L + EF W WF + + + + +LS R V TVW
Sbjct: 568 FVLTGVIVWLIERAENKEFQGSWPQQIGVVLWFGFSTLVYAHREKLKHNLS-RFVVTVWV 626
Query: 451 FFALILVCSYTANLAAYLIVERI 473
F LIL SYTA L + + V++I
Sbjct: 627 FAVLILTASYTATLTSMMTVQQI 649
>At3g04110.1 68416.m00435 glutamate receptor family protein (GLR1.1)
(GLR1) identical to putative glutamate receptor (GLR1)
GB:AF079998 [Arabidopsis thaliana]; plant glutamate
receptor family, PMID:11379626
Length = 808
Score = 42.3 bits (95), Expect = 7e-04
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 27/159 (16%)
Query: 351 RKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWII 410
R D AV + +T R +DF+ P+ + + I K K+ + ++F P K +W+
Sbjct: 489 RDKYDAAVGDITITSNRSLYVDFTLPYTDIGIGILTVK--KKSQGMWTFFDPFEKSLWLA 546
Query: 411 ------------------LHNEFS-IWNS-----FWFSLGSFMQQGSDVVPKSLSGRIVG 446
++ EF W WF + + + + K +S R +
Sbjct: 547 SGAFFVLTGIVVWLVERSVNPEFQGSWGQQLSMMLWFGFSTIVFAHREKLQK-MSSRFLV 605
Query: 447 TVWWFFALILVCSYTANLAAYLIVERIAAPMQSISYTST 485
VW F LIL SY+ANL + + R+ Q + ST
Sbjct: 606 IVWVFVVLILTSSYSANLTSTKTISRMQLNHQMVFGGST 644
>At5g11210.1 68418.m01310 glutamate receptor family protein (GLR2.5)
plant glutamate receptor family, PMID:11379626
Length = 829
Score = 41.9 bits (94), Expect = 0.001
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 33/196 (16%)
Query: 306 GFCKDLADLVAKRL--GIKYELRITKDNRKTEELFSEGS-SRLVDDIVRKDADIAVAPLA 362
GFC D+ + V ++ + YE I D T + GS +V ++ + D AV
Sbjct: 413 GFCIDVFNTVMSQMPYAVSYEY-IPFD---TPDGKPRGSYDEMVYNVFLGEFDGAVGDTT 468
Query: 363 VTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWII-----LHNEFSI 417
+ R +DF+ P+ + + K + FLKPL+KE+W++ L+ +
Sbjct: 469 ILANRSHYVDFALPYSETGIVFLVPVKDGKEKGEWVFLKPLTKELWLVTAASFLYIGIMV 528
Query: 418 W--------------------NSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILV 457
W + F+FS S + +S R++ VW F LIL
Sbjct: 529 WIFEYQADEEFREQMIIDKISSVFYFSF-STLFFAHRRPSESFFTRVLVVVWCFVLLILT 587
Query: 458 CSYTANLAAYLIVERI 473
SYTA L + L V+ +
Sbjct: 588 QSYTATLTSMLTVQEL 603
>At5g11180.1 68418.m01307 glutamate receptor family protein (GLR2.6)
plant glutamate receptor family, PMID:11379626
Length = 906
Score = 38.7 bits (86), Expect = 0.009
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 306 GFCKDLADLVAKRLGIKYELRITKDNRKTEELFSEGS-SRLVDDIVRKDADIAVAPLAVT 364
GFC D+ D +++ Y + +T + GS +V + + D AV +
Sbjct: 491 GFCIDVFDTAMRQM--PYAVPYEYIPFETPDGKPRGSYDEMVYHVFLGEFDGAVGDTTIL 548
Query: 365 PERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIILHNEF 415
R +DF+ P+ + + ++ K + FLKPL++E+W + F
Sbjct: 549 ANRSTYVDFALPYSETGIVVVVPVKDEREKGKWVFLKPLTRELWFLTAASF 599
>At5g27100.1 68418.m03235 glutamate receptor family protein (GLR2.1)
(GLR3) plant glutamate receptor family, PMID:11379626
Length = 909
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 439 SLSGRIVGTVWWFFALILVCSYTANLAAYLIVERIAAPMQSIS 481
S R+V +W+F L+L SYTA+LA+ L + + + +I+
Sbjct: 640 SFWARVVVIIWYFLVLVLTQSYTASLASLLTTQHLHPTVTNIN 682
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 355 DIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWII 410
D VA ++ R +DFS P+ V + + + FL PL+ +W+I
Sbjct: 526 DAVVADTTISSNRSMYVDFSLPYTPSGVGLVVPVKDSVRRSSTIFLMPLTLALWLI 581
>At3g07520.1 68416.m00896 glutamate receptor family protein (GLR1.4)
plant glutamate receptor family, PMID:11379626
Length = 861
Score = 35.1 bits (77), Expect = 0.11
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 27/142 (19%)
Query: 355 DIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIILHNE 414
D AV + +T R +DF+ PF + + + K K + KPL+ +W+ + +
Sbjct: 523 DAAVGDITITDNRSLYVDFTLPFTDMGLAVVTAK----DKSMWIIFKPLTLSLWLTIASF 578
Query: 415 FSIWNSF-WF--------SLGSFMQQGSDVVPKSLS--------------GRIVGTVWWF 451
F + + W GS QQ ++ S R V VW F
Sbjct: 579 FILTGAIVWLIERHDNADFQGSCFQQIGTLLCFGFSTLVFAHRERLQHNMSRFVVIVWIF 638
Query: 452 FALILVCSYTANLAAYLIVERI 473
LIL +YTA L + + V++I
Sbjct: 639 AVLILTSNYTATLTSVMTVQQI 660
>At5g54250.2 68418.m06758 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC4) identical to
cyclic nucleotide and calmodulin-regulated ion channel
(cngc4) GI:4581203 from [Arabidopsis thaliana]
Length = 694
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 439 SLSGRIVGTVWWFFALILVCSYTANLAA 466
+LSG I GTVWW AL ++ + A AA
Sbjct: 248 TLSGYIFGTVWWGIALNMIAYFVAAHAA 275
>At5g54250.1 68418.m06757 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC4) identical to
cyclic nucleotide and calmodulin-regulated ion channel
(cngc4) GI:4581203 from [Arabidopsis thaliana]
Length = 694
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 439 SLSGRIVGTVWWFFALILVCSYTANLAA 466
+LSG I GTVWW AL ++ + A AA
Sbjct: 248 TLSGYIFGTVWWGIALNMIAYFVAAHAA 275
>At5g15410.2 68418.m01803 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC2) identical to
cyclic nucleotide-gated cation channel GI:3894399 from
[Arabidopsis thaliana]
Length = 593
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 438 KSLSGRIVGTVWWFFALILVCSYTANLAA-----YLIVERIAA 475
+ ++G I GT+WW FAL L+ + A+ A L ++R+A+
Sbjct: 146 QKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVAS 188
>At5g15410.1 68418.m01804 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC2) identical to
cyclic nucleotide-gated cation channel GI:3894399 from
[Arabidopsis thaliana]
Length = 726
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 438 KSLSGRIVGTVWWFFALILVCSYTANLAA-----YLIVERIAA 475
+ ++G I GT+WW FAL L+ + A+ A L ++R+A+
Sbjct: 279 QKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVAS 321
>At4g11900.1 68417.m01893 S-locus lectin protein kinase family
protein contains Pfam domains, PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain, and
PF01453: Lectin (probable mannose binding)
Length = 849
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 89 SGLVMDDHWENEVTEYGAVNITGFRIVDHS-RKIVRDFMEGLRRMDPRFKGTISAKTALM 147
S +++DD +++++G I G + +D S ++IV F G + G IS K+ +
Sbjct: 666 SNILLDDEMNPKISDFGTARIFGCKQIDDSTQRIVGTF--GYMSPEYALGGVISEKSDIY 723
Query: 148 YDGVQVL 154
GV +L
Sbjct: 724 SFGVLLL 730
>At2g17110.1 68415.m01974 expressed protein
Length = 733
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 323 YELRITKDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDV 382
YE R + R S S+ + + + + P +P RE+V DF +PF +
Sbjct: 135 YEQRPSSPQRVHFGESSSSSTSEYNPYLNSNYGSKLPPPPPSPPREKVWDFLDPFDTYYT 194
Query: 383 PITHKKLQKQLKD 395
P T + ++L+D
Sbjct: 195 PYTPSRDTRELRD 207
>At5g36970.1 68418.m04433 harpin-induced protein-related /
HIN1-related / harpin-responsive protein-related weak
similarity to harpin inducing protein (hin1), Nicotiana
tabacum, EMBL:AF212183, GI:1619321
Length = 248
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 190 NPGKNWVVPFEHGDKISRLIKKTDIEGLTGNISFNEEGHRYNFTLNVVEMT 240
NP + + +E G KIS L +T I G++ +GH N T+ +VEMT
Sbjct: 124 NPNEKIGIYYEDGSKISVLYMQTRIS--NGSLPKFYQGHE-NTTIILVEMT 171
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 48 QHDRWGNKRIVLDCNAKNAKSILVEHVRKVQLG--RRTYHYMLSGLVMDDHWE 98
+ + W + + L CN + ++ I+ ++ V G R Y + L L ++ WE
Sbjct: 281 EREAWDSLKRALPCNHEGSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEESWE 333
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 363 VTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIILHNEFSIWNSF 421
V PER + + E + + + H L+D F+F + K+I +I H ++ +W F
Sbjct: 424 VLPERHKSIIRPEAMNATLINVVH---HFHLRDGFTFAD-MDKDIMVINHYKYQVWEVF 478
>At1g36980.1 68414.m04610 expressed protein
Length = 135
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 441 SGRIVGTVWWFFALILVCS 459
SG + GT WWF+ +VCS
Sbjct: 15 SGAVFGTGWWFWVDAVVCS 33
>At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase family
protein weak similarity to SP|Q59190 Uridine kinase (EC
2.7.1.48) (Uridine monophosphokinase) (Cytidine
monophosphokinase) {Borrelia burgdorferi}; contains Pfam
profile PF00485: Phosphoribulokinase / Uridine kinase
family
Length = 674
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 296 EFGQKEEQFHGFCKDLADLVAKRLGIKYELRITKDNRKTEELF 338
EF QK HG KD LV +R I+YE+ +D E+ F
Sbjct: 9 EFHQKR---HGLLKDQVQLVKRRDSIRYEIVSIQDRLSFEKGF 48
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.136 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,287,242
Number of Sequences: 28952
Number of extensions: 472248
Number of successful extensions: 1234
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1182
Number of HSP's gapped (non-prelim): 53
length of query: 500
length of database: 12,070,560
effective HSP length: 84
effective length of query: 416
effective length of database: 9,638,592
effective search space: 4009654272
effective search space used: 4009654272
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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