Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000567-TA|BGIBMGA000567-PA|IPR001320|Ionotropic
glutamate receptor, IPR001828|Extracellular ligand-binding receptor
(500 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate rec... 134 1e-31
U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate rece... 132 7e-31
AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA iono... 132 7e-31
Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical pr... 131 1e-30
U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic glut... 126 5e-29
L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate recep... 126 5e-29
U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate rece... 123 3e-28
U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate recep... 116 5e-26
AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic gl... 114 1e-25
AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic gl... 114 2e-25
AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic gl... 99 8e-21
U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate rece... 94 2e-19
AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic gl... 94 2e-19
U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate recep... 75 1e-13
AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic gl... 75 1e-13
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 59 6e-09
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 59 6e-09
AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic gl... 59 6e-09
AC006637-6|AAM54177.1| 328|Caenorhabditis elegans Glutamate rec... 59 8e-09
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 58 1e-08
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 58 1e-08
U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate recep... 56 6e-08
AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic gl... 56 8e-08
Z46242-5|CAA86330.2| 364|Caenorhabditis elegans Hypothetical pr... 34 0.27
U19861-1|AAA97554.2| 364|Caenorhabditis elegans mab-21 protein ... 34 0.27
AF099925-17|AAO38624.1| 462|Caenorhabditis elegans Calcium bind... 33 0.35
AF099925-16|AAC69511.1| 482|Caenorhabditis elegans Calcium bind... 33 0.35
AF099925-15|AAC69510.2| 585|Caenorhabditis elegans Calcium bind... 33 0.35
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 33 0.35
U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 31 1.9
U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 31 1.9
Z83234-5|CAB70171.2| 640|Caenorhabditis elegans Hypothetical pr... 31 2.5
AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl t... 30 3.3
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 30 4.4
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 30 4.4
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 30 4.4
AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical... 29 7.6
AC084197-25|AAK68591.1| 609|Caenorhabditis elegans Hypothetical... 29 7.6
>AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform a protein.
Length = 844
Score = 134 bits (325), Expect = 1e-31
Identities = 93/295 (31%), Positives = 150/295 (50%), Gaps = 32/295 (10%)
Query: 215 EGLTGNISFNEEGHRYNFTLNVVEMTVQSAMLKV----ATWSDVRGLQLVSQK--HVQLK 268
+GLTG ISFN R + L++ EM + A L +TW + L ++++
Sbjct: 341 KGLTGKISFNGTSDRSDSELHIWEMGITGAGLHTGIWKSTWEGSKELTMLAKNIPGTHEH 400
Query: 269 SPASYDINRTYIVTTVLQEPYLMPKPFEFGQKEEQFHGFCKDLADLVAKRLGIKYELRIT 328
AS +RT VT++ ++PY++ K G+ + + GFC DL D +A+ L Y L+I
Sbjct: 401 YQASVRESRTLKVTSIHEKPYVIEKIMPDGRIKHE--GFCVDLLDKLAEMLHFNYTLKIV 458
Query: 329 KDNRKTEELFSEGS-SRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHK 387
KDN+ E ++ +I+R DAD+AVAP+ VT R V+DF++PFL + + + +
Sbjct: 459 KDNKYGERKNGTDEWDGMIGEILRGDADMAVAPITVTATRLEVIDFTDPFLQLGISMLMR 518
Query: 388 KLQKQLKDTFS-FLKPLSKEIW-----------------IILH-----NEFSIWNSFWFS 424
+ + + + FL PLS +W +L EF I NS W+
Sbjct: 519 QPNPKSSSSLTRFLWPLSASVWTFSAIATVITALLVTVAAVLSPKESTAEFKIQNSVWYL 578
Query: 425 LGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVERIAAPMQS 479
+ ++ GS ++ + R++ VWW F L+L+ YTAN AA L V+R + P S
Sbjct: 579 VCILLRAGSGYNCQAGATRLISAVWWSFTLVLIAQYTANFAALLTVDRKSMPFNS 633
>U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform b protein.
Length = 977
Score = 132 bits (318), Expect = 7e-31
Identities = 117/406 (28%), Positives = 195/406 (48%), Gaps = 40/406 (9%)
Query: 57 IVLDCNAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMDDHWENEVTEYGAVNITGFRIVD 116
+++D + + + L ++ YHY+ S +D+ + + +NIT FRI D
Sbjct: 241 VIVDLEGSYRTRAFLRALEESVLVKKEYHYVFSNFDVDET-DLSGFHFSLINITIFRIFD 299
Query: 117 -HSRKIVRDFMEGLRRMDPRFKGTISAKTALMY--DGVQVLMDALSRLWRKKPDA-FRNA 172
+++K ++ E F T S TA + D + V AL + F +
Sbjct: 300 KNNKKFLKTRAEFHDVYRGGFSNTDSIPTAAAFAHDAILVAGKALQIAMNEHGKGIFDKS 359
Query: 173 LRRAAAGQMNTTKVIDCNPGKNWVVP-----FEHGDKISRLIKK---TDIEG-LTGNISF 223
R K + C P ++ FEHG KI+ IKK TD +G LTG I F
Sbjct: 360 FVRHQLFNRGR-KGLYCRPHEDQTESRQFETFEHGKKIAEAIKKVVLTDKDGTLTGRIQF 418
Query: 224 NE-EGHRYNFTLNVVEMT--VQS--AMLKVATWSDVRGLQLVSQKHVQLKSPASYDINRT 278
++ G R NF+ +VE+ V S ++ + W++ G L +++VQ K S +
Sbjct: 419 DKVTGKRTNFSAEIVEIKPGVNSLNSIWERFQWAEGEGFLLGGERYVQEKKKDSSQTRKG 478
Query: 279 YI----------VTTVLQEPYLMPKPFEFGQKE----EQFHGFCKDLADLVAKRL-GIKY 323
+ V TVL +P++M K G+ E ++F G+C DL +L+AK + G +Y
Sbjct: 479 ILPSKPWQLRFNVVTVLVKPFVMLKRRNPGEPELKGNDRFEGYCIDLLNLLAKNITGFEY 538
Query: 324 ELRITKDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVP 383
++ I+ N+ ++ ++ + AD+AVAPL +T ERER +DFS+PF++ +
Sbjct: 539 DVFISDGNKYGSRQADGSWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGIS 598
Query: 384 ITHKKLQKQLKDTFSFLKPLSKEIWIILHNEF-----SIWNSFWFS 424
I KK +KQ + FSF++PL IWI + + +I+ WFS
Sbjct: 599 IMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFS 644
Score = 101 bits (242), Expect = 1e-21
Identities = 39/68 (57%), Positives = 58/68 (85%)
Query: 413 NEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVER 472
NEF+++NS WF+L +FMQQG+D++P+++SGRI + WWFF LI+V SYTANLAA+L +ER
Sbjct: 661 NEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLER 720
Query: 473 IAAPMQSI 480
+ P++S+
Sbjct: 721 MTPPIESV 728
>AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA
ionotropic glutamate receptorsubunit GLR-2 protein.
Length = 977
Score = 132 bits (318), Expect = 7e-31
Identities = 117/406 (28%), Positives = 195/406 (48%), Gaps = 40/406 (9%)
Query: 57 IVLDCNAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMDDHWENEVTEYGAVNITGFRIVD 116
+++D + + + L ++ YHY+ S +D+ + + +NIT FRI D
Sbjct: 241 VIVDLEGSYRTRAFLRALEESVLVKKEYHYVFSNFDVDET-DLSGFHFSLINITIFRIFD 299
Query: 117 -HSRKIVRDFMEGLRRMDPRFKGTISAKTALMY--DGVQVLMDALSRLWRKKPDA-FRNA 172
+++K ++ E F T S TA + D + V AL + F +
Sbjct: 300 KNNKKFLKTRAEFHDVYRGGFSNTDSIPTAAAFAHDAILVAGKALQIAMNEHGKGIFDKS 359
Query: 173 LRRAAAGQMNTTKVIDCNPGKNWVVP-----FEHGDKISRLIKK---TDIEG-LTGNISF 223
R K + C P ++ FEHG KI+ IKK TD +G LTG I F
Sbjct: 360 FVRHQLFNRGR-KGLYCRPHEDQTESRQFETFEHGKKIAEAIKKVVLTDKDGTLTGRIQF 418
Query: 224 NE-EGHRYNFTLNVVEMT--VQS--AMLKVATWSDVRGLQLVSQKHVQLKSPASYDINRT 278
++ G R NF+ +VE+ V S ++ + W++ G L +++VQ K S +
Sbjct: 419 DKVTGKRTNFSAEIVEIKPGVNSLNSIWERFQWAEGEGFLLGGERYVQEKKKDSSQTRKG 478
Query: 279 YI----------VTTVLQEPYLMPKPFEFGQKE----EQFHGFCKDLADLVAKRL-GIKY 323
+ V TVL +P++M K G+ E ++F G+C DL +L+AK + G +Y
Sbjct: 479 ILPSKPWQLRFNVVTVLVKPFVMLKRRNPGEPELKGNDRFEGYCIDLLNLLAKNITGFEY 538
Query: 324 ELRITKDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVP 383
++ I+ N+ ++ ++ + AD+AVAPL +T ERER +DFS+PF++ +
Sbjct: 539 DVFISDGNKYGSRQADGSWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGIS 598
Query: 384 ITHKKLQKQLKDTFSFLKPLSKEIWIILHNEF-----SIWNSFWFS 424
I KK +KQ + FSF++PL IWI + + +I+ WFS
Sbjct: 599 IMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFS 644
Score = 101 bits (242), Expect = 1e-21
Identities = 39/68 (57%), Positives = 58/68 (85%)
Query: 413 NEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVER 472
NEF+++NS WF+L +FMQQG+D++P+++SGRI + WWFF LI+V SYTANLAA+L +ER
Sbjct: 661 NEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLER 720
Query: 473 IAAPMQSI 480
+ P++S+
Sbjct: 721 MTPPIESV 728
>Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical
protein K10D3.1 protein.
Length = 836
Score = 131 bits (317), Expect = 1e-30
Identities = 94/317 (29%), Positives = 157/317 (49%), Gaps = 44/317 (13%)
Query: 199 FEHGDKISRLIKKTDIEGLTGNISFNEEGHRYNFTLNVVEMTVQSAMLKVATWSDVRGLQ 258
++ G I + + + G++G++ + G R N+TL+V T+ + K A WS R +
Sbjct: 324 WKSGSDIKKRFFENPLAGISGDLHWAPSGERSNYTLHVYRRTL--SFQKFAEWSS-RTRR 380
Query: 259 LVSQKHVQL-KSPASYDINRTYIVTTVLQEPYLMPKPFEFGQKEEQFHGFCKDLADLVAK 317
+ S + V + S + ++ +V E PF + G+C DL +A
Sbjct: 381 IASSEAVVIANSSEKLTLEGKHLKISVYLEA-----PFVMITSNGSYEGYCIDLLHKIAN 435
Query: 318 RLGIKYELRITKDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPF 377
L Y ++ +DN + + S +V ++ R DAD+AVA L ++ R V+DF+ P+
Sbjct: 436 ILKFTYTIQKVRDNAYGSKESNGKWSGMVGELQRGDADLAVASLTISYGRSEVIDFTVPY 495
Query: 378 LSVDVPITHKKLQKQLKD---------------TFSFLKPLSKEIWII------------ 410
+ + + I KK + + D TF+ +S IWII
Sbjct: 496 MHLGISILFKKPRIRDSDWFKFMDPLSTQVWIMTFASYFVVSVAIWIIAKISPYEQFERD 555
Query: 411 --------LHNEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTA 462
+ N+FS+ NSFWF++ S MQQGS++ P++ S R++ +WWFFALIL+ SYTA
Sbjct: 556 EDNGQYKPVDNQFSLRNSFWFTVCSLMQQGSELCPRAASTRLLTGIWWFFALILISSYTA 615
Query: 463 NLAAYLIVERIAAPMQS 479
NLAA L R+ P+++
Sbjct: 616 NLAAVLTTRRMETPIEN 632
>U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic
glutamate receptor subunitprotein.
Length = 962
Score = 126 bits (303), Expect = 5e-29
Identities = 108/383 (28%), Positives = 182/383 (47%), Gaps = 35/383 (9%)
Query: 56 RIVLDC-NAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMDDHWENEVTEYGAVNITGFRI 114
RI++DC + K K +L+ ++R Q + YHY+L+ + + E+ + G +NI+GF I
Sbjct: 224 RILIDCASPKRLKKLLI-NIRSAQFNQANYHYVLANYDFLPY-DQEMFQNGNINISGFNI 281
Query: 115 VDHSRKIVRDFMEGLRRMDPRFKGT-ISAKTALMYDGVQVLMDALSRLWRKKPDAFRNAL 173
++ + + L+ G +S + A+ +D + V ++ + F
Sbjct: 282 INKDGREYWSLKKHLKTSSSLGGGDDVSVEAAVGHDAMLVTWHGFAKCLQANDSLFHGTF 341
Query: 174 RRAAAGQMNTTKVIDCNPGKNWVVP------FEHGDKISRLIKKTDI---EG-LTGNISF 223
R + C+P + P FEHG I + I EG LTGNI F
Sbjct: 342 RHRRFFNRGFPGIY-CDPLSDRSHPNRPFSSFEHGKTIGVAFRNMKIGHKEGTLTGNIEF 400
Query: 224 NEEGHRYNFTLNVVEMTVQSAML----KVATWSDVRGLQLVSQKHVQLKSPASYDINRT- 278
+ G+R NF +++V++ + +V W +G+ S + V S S + ++
Sbjct: 401 DRFGNRKNFDVSIVDLVSNTKATFNSKEVLAWR--QGVGFFSNRTVAQHSRKSQNDHKDN 458
Query: 279 -YIVTTVLQEPYLMPKP--FEFG-----QKEEQFHGFCKDLADLVAKRLG-IKYELRI-T 328
IV T L P++M K E Q +F GFC DL L+A ++ YE+++ T
Sbjct: 459 QVIVLTNLVAPFVMIKRECLEMANLTECQGNNKFEGFCIDLLKLLADKIEEFNYEIKLGT 518
Query: 329 KDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKK 388
K K + +G ++ +++ A VA L + ERERV+DFS+PF++ + I KK
Sbjct: 519 KAGSKQADGSWDG---MIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKK 575
Query: 389 LQKQLKDTFSFLKPLSKEIWIIL 411
KQ FSF++PLS EIW+ +
Sbjct: 576 PDKQEFSVFSFMQPLSTEIWMYI 598
Score = 101 bits (243), Expect = 9e-22
Identities = 38/70 (54%), Positives = 59/70 (84%)
Query: 411 LHNEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIV 470
+ N+FS++N WF+L +FMQQG+D++P+S+SGRI + WWFF +I+V SYTANLAA+L +
Sbjct: 632 ISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTL 691
Query: 471 ERIAAPMQSI 480
E++ AP++S+
Sbjct: 692 EKMQAPIESV 701
>L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 1 protein.
Length = 962
Score = 126 bits (303), Expect = 5e-29
Identities = 108/383 (28%), Positives = 182/383 (47%), Gaps = 35/383 (9%)
Query: 56 RIVLDC-NAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMDDHWENEVTEYGAVNITGFRI 114
RI++DC + K K +L+ ++R Q + YHY+L+ + + E+ + G +NI+GF I
Sbjct: 224 RILIDCASPKRLKKLLI-NIRSAQFNQANYHYVLANYDFLPY-DQEMFQNGNINISGFNI 281
Query: 115 VDHSRKIVRDFMEGLRRMDPRFKGT-ISAKTALMYDGVQVLMDALSRLWRKKPDAFRNAL 173
++ + + L+ G +S + A+ +D + V ++ + F
Sbjct: 282 INKDGREYWSLKKHLKTSSSLGGGDDVSVEAAVGHDAMLVTWHGFAKCLQANDSLFHGTF 341
Query: 174 RRAAAGQMNTTKVIDCNPGKNWVVP------FEHGDKISRLIKKTDI---EG-LTGNISF 223
R + C+P + P FEHG I + I EG LTGNI F
Sbjct: 342 RHRRFFNRGFPGIY-CDPLSDRSHPNRPFSSFEHGKTIGVAFRNMKIGHKEGTLTGNIEF 400
Query: 224 NEEGHRYNFTLNVVEMTVQSAML----KVATWSDVRGLQLVSQKHVQLKSPASYDINRT- 278
+ G+R NF +++V++ + +V W +G+ S + V S S + ++
Sbjct: 401 DRFGNRKNFDVSIVDLVSNTKATFNSKEVLAWR--QGVGFFSNRTVAQHSRKSQNDHKDN 458
Query: 279 -YIVTTVLQEPYLMPKP--FEFG-----QKEEQFHGFCKDLADLVAKRLG-IKYELRI-T 328
IV T L P++M K E Q +F GFC DL L+A ++ YE+++ T
Sbjct: 459 QVIVLTNLVAPFVMIKRECLEMANLTECQGNNKFEGFCIDLLKLLADKIEEFNYEIKLGT 518
Query: 329 KDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKK 388
K K + +G ++ +++ A VA L + ERERV+DFS+PF++ + I KK
Sbjct: 519 KAGSKQADGSWDG---MIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKK 575
Query: 389 LQKQLKDTFSFLKPLSKEIWIIL 411
KQ FSF++PLS EIW+ +
Sbjct: 576 PDKQEFSVFSFMQPLSTEIWMYI 598
Score = 101 bits (243), Expect = 9e-22
Identities = 38/70 (54%), Positives = 59/70 (84%)
Query: 411 LHNEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIV 470
+ N+FS++N WF+L +FMQQG+D++P+S+SGRI + WWFF +I+V SYTANLAA+L +
Sbjct: 632 ISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTL 691
Query: 471 ERIAAPMQSI 480
E++ AP++S+
Sbjct: 692 EKMQAPIESV 701
>U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform a protein.
Length = 908
Score = 123 bits (296), Expect = 3e-28
Identities = 87/255 (34%), Positives = 139/255 (54%), Gaps = 29/255 (11%)
Query: 199 FEHGDKISRLIKK---TDIEG-LTGNISFNE-EGHRYNFTLNVVEMT--VQS--AMLKVA 249
FEHG KI+ IKK TD +G LTG I F++ G R NF+ +VE+ V S ++ +
Sbjct: 321 FEHGKKIAEAIKKVVLTDKDGTLTGRIQFDKVTGKRTNFSAEIVEIKPGVNSLNSIWERF 380
Query: 250 TWSDVRGLQLVSQKHVQLKSPASYDINRTYI----------VTTVLQEPYLMPKPFEFGQ 299
W++ G L +++VQ K S + + V TVL +P++M K G+
Sbjct: 381 QWAEGEGFLLGGERYVQEKKKDSSQTRKGILPSKPWQLRFNVVTVLVKPFVMLKRRNPGE 440
Query: 300 KE----EQFHGFCKDLADLVAKRL-GIKYELRITKDNRKTEELFSEGSSRLVDDIVRKDA 354
E ++F G+C DL +L+AK + G +Y++ I+ N+ ++ ++ + A
Sbjct: 441 PELKGNDRFEGYCIDLLNLLAKNITGFEYDVFISDGNKYGSRQADGSWDGMIGYLLNETA 500
Query: 355 DIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIILHNE 414
D+AVAPL +T ERER +DFS+PF++ + I KK +KQ + FSF++PL IWI +
Sbjct: 501 DVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTLSS 560
Query: 415 F-----SIWNSFWFS 424
+ +I+ WFS
Sbjct: 561 YFGVSLTIFLVSWFS 575
Score = 101 bits (242), Expect = 1e-21
Identities = 39/68 (57%), Positives = 58/68 (85%)
Query: 413 NEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVER 472
NEF+++NS WF+L +FMQQG+D++P+++SGRI + WWFF LI+V SYTANLAA+L +ER
Sbjct: 592 NEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLER 651
Query: 473 IAAPMQSI 480
+ P++S+
Sbjct: 652 MTPPIESV 659
>U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 5 protein.
Length = 932
Score = 116 bits (278), Expect = 5e-26
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 8/281 (2%)
Query: 136 FKGTISAKTALMYDGVQVLMDALSRLWRKKPDAFRNALRRAAAG-QMNTTKVIDCNPGKN 194
FK I+ K A+ D + L + AF N ++ QMN C
Sbjct: 290 FKEHITEKWAMKTDNSRNLKMMEAVFTFDAVYAFANVFNELSSHMQMNDVPQTLCRKSSR 349
Query: 195 WVVPFEHGDKISRLIKKTDIEGLTGNIS-FNEEGHRYNFTLNVVEMTVQSAMLKVATWSD 253
++HG + I D+ GL+G++ N + NF++ + + + + W
Sbjct: 350 NSRKYQHGRSLIDNIVHNDLHGLSGDLRRLNGHPLKSNFSMRIQLLGYSGRLDDIGFWEP 409
Query: 254 VRGLQLV----SQKHVQLKSPASYDINRTYIVTTVLQEPYLMPKPFEFG-QKEEQFHGFC 308
+ + S+ +Q S ++ + VTT+++ PY+M K + +F GFC
Sbjct: 410 ATNVHVNMSGDSKAQLQRNVQVSDELKPHFRVTTIMERPYVMLKKNHYELDANSKFEGFC 469
Query: 309 KDLADLVAKRLGIKYELRITKDNRKTEELFSEGS-SRLVDDIVRKDADIAVAPLAVTPER 367
DL ++K LG Y + KD + + + GS ++ +I+R +A++AVAPL V R
Sbjct: 470 IDLLAELSKDLGFTYTIHAVKDGKYGNDKYGNGSWDGMMGEILRGEAEMAVAPLTVNYRR 529
Query: 368 ERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIW 408
+DF++PFLS+ + I +K Q D FSFL PLS +IW
Sbjct: 530 SEAVDFTKPFLSLGISILYKVPDDQQPDLFSFLNPLSWQIW 570
Score = 75.8 bits (178), Expect = 7e-14
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 404 SKEIWIILHNEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTAN 463
++E I++ N +S WN+ W+ L + ++ G D P+++S R++G WW F L+++ +YTAN
Sbjct: 616 NQEAPIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRLLGGTWWVFYLVIISAYTAN 675
Query: 464 LAAYLIVERIAAPMQSI 480
LAA L V R P++++
Sbjct: 676 LAAVLTVSRPYIPIKNL 692
>AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic
glutamate receptor GLR-6 protein.
Length = 396
Score = 114 bits (275), Expect = 1e-25
Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 26/223 (11%)
Query: 281 VTTVLQEPYLMPKPFEFGQKEEQFHGFCKDLADLVAKRLGIKYELRITKDNRKTEELFSE 340
VT++ ++PY++ K G+ + + GFC DL D +A+ L Y L+I KDN+ E
Sbjct: 1 VTSIHEKPYVIEKIMPDGRIKHE--GFCVDLLDKLAEMLHFNYTLKIVKDNKYGERKNGT 58
Query: 341 GS-SRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFS- 398
++ +I+R DAD+AVAP+ VT R V+DF++PFL + + + ++ + + +
Sbjct: 59 DEWDGMIGEILRGDADMAVAPITVTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTR 118
Query: 399 FLKPLSKEIW-----------------IILH-----NEFSIWNSFWFSLGSFMQQGSDVV 436
FL PLS +W +L EF I NS W+ + ++ GS
Sbjct: 119 FLWPLSASVWTFSAIATVITALLVTVAAVLSPKESTAEFKIQNSVWYLVCILLRAGSGYN 178
Query: 437 PKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVERIAAPMQS 479
++ + R++ VWW F L+L+ YTAN AA L V+R + P S
Sbjct: 179 CQAGATRLISAVWWSFTLVLIAQYTANFAALLTVDRKSMPFNS 221
>AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic
glutamate receptor GLR-3 protein.
Length = 398
Score = 114 bits (274), Expect = 2e-25
Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 35/221 (15%)
Query: 294 PFEFGQKEEQFHGFCKDLADLVAKRLGIKYELRITKDNRKTEELFSEGSSRLVDDIVRKD 353
PF + G+C DL +A L Y ++ +DN + + S +V ++ R D
Sbjct: 8 PFVMITSNGSYEGYCIDLLHKIANILKFTYTIQKVRDNAYGSKESNGKWSGMVGELQRGD 67
Query: 354 ADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKD---------------TFS 398
AD+AVA L ++ R V+DF+ P++ + + I KK + + D TF+
Sbjct: 68 ADLAVASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFKFMDPLSTQVWIMTFA 127
Query: 399 FLKPLSKEIWII--------------------LHNEFSIWNSFWFSLGSFMQQGSDVVPK 438
+S IWII + N+FS+ NSFWF++ S MQQGS++ P+
Sbjct: 128 SYFVVSVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTVCSLMQQGSELCPR 187
Query: 439 SLSGRIVGTVWWFFALILVCSYTANLAAYLIVERIAAPMQS 479
+ S R++ +WWFFALIL+ SYTANLAA L R+ P+++
Sbjct: 188 AASTRLLTGIWWFFALILISSYTANLAAVLTTRRMETPIEN 228
>AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic
glutamate receptor GLR-5 protein.
Length = 425
Score = 98.7 bits (235), Expect = 8e-21
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 281 VTTVLQEPYLMPKPFEFG-QKEEQFHGFCKDLADLVAKRLGIKYELRITKDNRKTEELFS 339
VTT+++ PY+M K + +F GFC DL ++K LG Y + KD + + +
Sbjct: 1 VTTIMERPYVMLKKNHYELDANSKFEGFCIDLLAELSKDLGFTYTIHAVKDGKYGNDKYG 60
Query: 340 EGS-SRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFS 398
GS ++ +I+R +A++AVAPL V R +DF++PFLS+ + I +K Q D FS
Sbjct: 61 NGSWDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGISILYKVPDDQQPDLFS 120
Query: 399 FLKPLSKEIW 408
FL PLS +IW
Sbjct: 121 FLNPLSWQIW 130
Score = 75.8 bits (178), Expect = 7e-14
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 404 SKEIWIILHNEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTAN 463
++E I++ N +S WN+ W+ L + ++ G D P+++S R++G WW F L+++ +YTAN
Sbjct: 176 NQEAPIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRLLGGTWWVFYLVIISAYTAN 235
Query: 464 LAAYLIVERIAAPMQSI 480
LAA L V R P++++
Sbjct: 236 LAAVLTVSRPYIPIKNL 252
>U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 4 protein.
Length = 951
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/67 (53%), Positives = 54/67 (80%)
Query: 413 NEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVER 472
N+F++ NSFWF++GS MQQGSDV+P++ + R++ VWW F I++ SYTA LAA+L VER
Sbjct: 579 NQFTVLNSFWFTMGSLMQQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVER 638
Query: 473 IAAPMQS 479
++ P++S
Sbjct: 639 MSTPIES 645
Score = 73.7 bits (173), Expect = 3e-13
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 217 LTGNISFNEEGHRYNFTLNVVEMTVQSAMLKVATWSDVRGLQLVSQKHVQLK---SPASY 273
LTG++ F G R + + V + S +K+ WS+ RG S+ + + P S
Sbjct: 345 LTGDVQFKSNGERDDIMYHGVGR-INSQFVKLGNWSEKRGWNFDSRYANRWEFDIDPDSE 403
Query: 274 DINRTYIVTTVLQEPYLMPKPFEFGQKEEQFHGFCKDLADLVAKRLGIKYELRITKDNRK 333
D+ ++ V E +PF E Q+ GFC DL + + + L Y + +D
Sbjct: 404 DLEGLHLRVVVYLE-----EPFVIKTGENQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTY 458
Query: 334 TEELFSEGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQL 393
E S + ++ + R +AD++++ + +T R V+DF+ PF+ + + I + ++
Sbjct: 459 GIEDESGRWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEET 518
Query: 394 K--DTFSFLKPLSKEIWIIL 411
++FL+PLS +WI L
Sbjct: 519 DKGSLWTFLEPLSLTVWISL 538
>AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic
glutamate receptor GLR-4 protein.
Length = 409
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/67 (53%), Positives = 54/67 (80%)
Query: 413 NEFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVER 472
N+F++ NSFWF++GS MQQGSDV+P++ + R++ VWW F I++ SYTA LAA+L VER
Sbjct: 168 NQFTVLNSFWFTMGSLMQQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVER 227
Query: 473 IAAPMQS 479
++ P++S
Sbjct: 228 MSTPIES 234
Score = 59.3 bits (137), Expect = 6e-09
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 291 MPKPFEFGQKEEQFHGFCKDLADLVAKRLGIKYELRITKDNRKTEELFSEGSSRLVDDIV 350
+ +PF E Q+ GFC DL + + + L Y + +D E S + ++ +
Sbjct: 5 LEEPFVIKTGENQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDESGRWNGIIGALQ 64
Query: 351 RKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLK--DTFSFLKPLSKEIW 408
R +AD++++ + +T R V+DF+ PF+ + + I + ++ ++FL+PLS +W
Sbjct: 65 RHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKGSLWTFLEPLSLTVW 124
Query: 409 IIL 411
I L
Sbjct: 125 ISL 127
>U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 7 protein.
Length = 465
Score = 74.9 bits (176), Expect = 1e-13
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 414 EFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVERI 473
+FS+ WF + S QG PK++SGR+V WW F I++ SYTANLAA+L V R+
Sbjct: 180 QFSLKECLWFCMTSLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRL 239
Query: 474 AAPMQSI 480
P+ S+
Sbjct: 240 EQPISSL 246
Score = 56.8 bits (131), Expect = 3e-08
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 281 VTTVLQEPYLMPKPFEFGQKEEQFHGFCKDLADLVAKRLGIKYELRITKDNRKTEELFSE 340
V T++Q P++ G + + G+C DL +++ + Y + +D +
Sbjct: 17 VVTLIQPPFVQ----RTGDPDTPYEGYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDDNG 72
Query: 341 GSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLS-VDVPITHKKLQKQLKDTFSF 399
+ L+ +V ADIA+APL+V ERE +DF+ P+ V I KK + F F
Sbjct: 73 NWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEY-SLFKF 131
Query: 400 LKPLSKEIWIIL 411
+K L +W+ +
Sbjct: 132 MKVLEWPVWLCI 143
>AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic
glutamate receptor GLR-7 protein.
Length = 436
Score = 74.9 bits (176), Expect = 1e-13
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 414 EFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVERI 473
+FS+ WF + S QG PK++SGR+V WW F I++ SYTANLAA+L V R+
Sbjct: 164 QFSLKECLWFCMTSLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRL 223
Query: 474 AAPMQSI 480
P+ S+
Sbjct: 224 EQPISSL 230
Score = 56.8 bits (131), Expect = 3e-08
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 281 VTTVLQEPYLMPKPFEFGQKEEQFHGFCKDLADLVAKRLGIKYELRITKDNRKTEELFSE 340
V T++Q P++ G + + G+C DL +++ + Y + +D +
Sbjct: 1 VVTLIQPPFVQ----RTGDPDTPYEGYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDDNG 56
Query: 341 GSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLS-VDVPITHKKLQKQLKDTFSF 399
+ L+ +V ADIA+APL+V ERE +DF+ P+ V I KK + F F
Sbjct: 57 NWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEY-SLFKF 115
Query: 400 LKPLSKEIWIIL 411
+K L +W+ +
Sbjct: 116 MKVLEWPVWLCI 127
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 59.3 bits (137), Expect = 6e-09
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 306 GFCKDLADLVAKRLGIKYELRITKDNR---KTEELFSEGSSRLVDDIVRKDADIAVAPLA 362
G+C DL + +A +G Y L +D + KTE G + L+ D++ AD+ V L
Sbjct: 348 GYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTEN----GWNGLIADLMHNKADMCVTSLK 403
Query: 363 VTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIIL 411
+ ER R +DFS PFL + I K L T +FL+P W+I+
Sbjct: 404 LNSERARDIDFSLPFLDTGISIIVKIRSGVLSPT-AFLEPFEYSTWVII 451
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 413 NEFSIWNSFWFSLGS-FMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLI 469
++FS++ S+W + F S VPKS R++ VW F L + YTANLAA++I
Sbjct: 484 HKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMI 541
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 59.3 bits (137), Expect = 6e-09
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 306 GFCKDLADLVAKRLGIKYELRITKDNR---KTEELFSEGSSRLVDDIVRKDADIAVAPLA 362
G+C DL + +A +G Y L +D + KTE G + L+ D++ AD+ V L
Sbjct: 348 GYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTEN----GWNGLIADLMHNKADMCVTSLK 403
Query: 363 VTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIIL 411
+ ER R +DFS PFL + I K L T +FL+P W+I+
Sbjct: 404 LNSERARDIDFSLPFLDTGISIIVKIRSGVLSPT-AFLEPFEYSTWVII 451
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 413 NEFSIWNSFWFSLGS-FMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLI 469
++FS++ S+W + F S VPKS R++ VW F L + YTANLAA++I
Sbjct: 484 HKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMI 541
>AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic
glutamate receptor NMR-2 protein.
Length = 433
Score = 59.3 bits (137), Expect = 6e-09
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 306 GFCKDLADLVAKRLGIKYELRITKDNR---KTEELFSEGSSRLVDDIVRKDADIAVAPLA 362
G+C DL + +A +G Y L +D + KTE G + L+ D++ AD+ V L
Sbjct: 55 GYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTEN----GWNGLIADLMHNKADMCVTSLK 110
Query: 363 VTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWIIL 411
+ ER R +DFS PFL + I K L T +FL+P W+I+
Sbjct: 111 LNSERARDIDFSLPFLDTGISIIVKIRSGVLSPT-AFLEPFEYSTWVII 158
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 413 NEFSIWNSFWFSLGS-FMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLI 469
++FS++ S+W + F S VPKS R++ VW F L + YTANLAA++I
Sbjct: 191 HKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMI 248
>AC006637-6|AAM54177.1| 328|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform b protein.
Length = 328
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 414 EFSIWNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVERI 473
EF I NS W+ + ++ GS ++ + R++ VWW F L+L+ YTAN AA L V+R
Sbjct: 52 EFKIQNSVWYLVCILLRAGSGYNCQAGATRLISAVWWSFTLVLIAQYTANFAALLTVDRK 111
Query: 474 AAPMQS 479
+ P S
Sbjct: 112 SMPFNS 117
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 58.4 bits (135), Expect = 1e-08
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 LDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWI--ILHNEFSIWNSFWFSLGSF 428
LDF PF K++++ LK F E+WI + + WF G
Sbjct: 586 LDFKSPFERFYQ--ADKEMEQDLKKEF--------ELWIGKDADENVNFGEAMWFVWGVL 635
Query: 429 MQQG-SDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVER 472
+ G S+ P+S S R++G VW F +I+V SYTANLAA+L++++
Sbjct: 636 LNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFLVLDQ 680
Score = 50.4 bits (115), Expect = 3e-06
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 343 SRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKP 402
S ++ ++ AD+A+ + + PERER++DF+EP+L + I K + + SFL+P
Sbjct: 505 SGVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRILEKNIPRD-SPMQSFLQP 563
Query: 403 LSKEIWIIL 411
L +W L
Sbjct: 564 LQSSLWTAL 572
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 58.4 bits (135), Expect = 1e-08
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 LDFSEPFLSVDVPITHKKLQKQLKDTFSFLKPLSKEIWI--ILHNEFSIWNSFWFSLGSF 428
LDF PF K++++ LK F E+WI + + WF G
Sbjct: 586 LDFKSPFERFYQ--ADKEMEQDLKKEF--------ELWIGKDADENVNFGEAMWFVWGVL 635
Query: 429 MQQG-SDVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVER 472
+ G S+ P+S S R++G VW F +I+V SYTANLAA+L++++
Sbjct: 636 LNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFLVLDQ 680
Score = 50.4 bits (115), Expect = 3e-06
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 343 SRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFLKP 402
S ++ ++ AD+A+ + + PERER++DF+EP+L + I K + + SFL+P
Sbjct: 505 SGVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRILEKNIPRD-SPMQSFLQP 563
Query: 403 LSKEIWIIL 411
L +W L
Sbjct: 564 LQSSLWTAL 572
>U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 8 protein.
Length = 489
Score = 56.0 bits (129), Expect = 6e-08
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 280 IVTTVLQEPYLMPKPFEFGQKEEQFHG--FCKDLADLVAKRLGIKYELRITKDNRKTEEL 337
+V ++ PY+ F ++ +G ++ + KRL + YE+ + E L
Sbjct: 8 MVVPAIEPPYVNYVNFSDAAVTDKGYGPGVVMEILKEIGKRLNLTYEILPALGSTWGEYL 67
Query: 338 FSEGSSRLVDDIVRKDADIAVAPLAVTPERERVLDFSEPFLSVDVPITHKKLQKQLKDTF 397
+ +VR + D+ + +R + D + PF I + +K DT
Sbjct: 68 NGSWTGAF-GQLVRGEVDLLAGGAIMEYDRSVIADLTYPFQFEPTGIMIRSPEKYEDDTL 126
Query: 398 SFL-KPLSKEIWII---------------------LHNEFSI--WNSFWFSLGSFMQQGS 433
+ +P S E+W+I ++ E ++ + S W F+QQG
Sbjct: 127 LIVTEPFSWEVWVITAAVILISGVIFLVMTNIIRKVYEEMTVTPFESIWVFFSIFVQQGL 186
Query: 434 DVVPKSLSGRIVGTVWWFFALILVCSYTANLAAYLIVERIAAPMQSI 480
P+S S R++ +WW ++ L ++T +L A V++ P Q+I
Sbjct: 187 PEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVPFQNI 233
>AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic
glutamate receptor GLR-8 protein.
Length = 406
Score = 55.6 bits (128), Expect = 8e-08
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 25/199 (12%)
Query: 306 GFCKDLADLVAKRLGIKYELRITKDNRKTEELFSEGSSRLVDDIVRKDADIAVAPLAVTP 365
G ++ + KRL + YE+ + E L + +VR + D+ +
Sbjct: 28 GVVMEILKEIGKRLNLTYEILPALGSTWGEYLNGSWTGAF-GQLVRGEVDLLAGGAIMEY 86
Query: 366 ERERVLDFSEPFLSVDVPITHKKLQKQLKDTFSFL-KPLSKEIWII-------------- 410
+R + D + PF I + +K DT + +P S E+W+I
Sbjct: 87 DRSVIADLTYPFQFEPTGIMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLV 146
Query: 411 -------LHNEFSI--WNSFWFSLGSFMQQGSDVVPKSLSGRIVGTVWWFFALILVCSYT 461
++ E ++ + S W F+QQG P+S S R++ +WW ++ L ++T
Sbjct: 147 MTNIIRKVYEEMTVTPFESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFT 206
Query: 462 ANLAAYLIVERIAAPMQSI 480
+L A V++ P Q+I
Sbjct: 207 GSLVALFAVDKTNVPFQNI 225
>Z46242-5|CAA86330.2| 364|Caenorhabditis elegans Hypothetical
protein F35G12.6 protein.
Length = 364
Score = 33.9 bits (74), Expect = 0.27
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 95 DHWENEVTEYGAVNITGFRIVDHSRKIVRDFMEGLRRMDPRFKGTISAKTALMYDGVQV 153
+++ NE ++ V +T + V K+V++ ++ + +PRF T+S T +DG+ V
Sbjct: 13 NNYFNEKVQHRKVRVT--KTVQRIAKVVQEILKEVEAQEPRFINTLSETTTGRFDGIVV 69
>U19861-1|AAA97554.2| 364|Caenorhabditis elegans mab-21 protein
protein.
Length = 364
Score = 33.9 bits (74), Expect = 0.27
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 95 DHWENEVTEYGAVNITGFRIVDHSRKIVRDFMEGLRRMDPRFKGTISAKTALMYDGVQV 153
+++ NE ++ V +T + V K+V++ ++ + +PRF T+S T +DG+ V
Sbjct: 13 NNYFNEKVQHRKVRVT--KTVQRIAKVVQEILKEVEAQEPRFINTLSETTTGRFDGIVV 69
>AF099925-17|AAO38624.1| 462|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform c protein.
Length = 462
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 35 NASEALEFLLTLEQHDRWGNKRIVLDCNAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMD 94
NA E +F + +K+ + +A N+ ++ ++ ++V +
Sbjct: 244 NAPEFADFERIIRARAIENSKKAMRVVDADNSGTLTLDEAKRVAFEHYGFDEATLAPFFG 303
Query: 95 DHWENEVTEYGAVNITGFRIVDHSRKIVRDFMEGLRRMDPRFKGTIS 141
ENE + V GFR V +R VRD M+ ++R+D G +S
Sbjct: 304 QADENEDGQLDNVEFAGFRSVIRARS-VRDAMDKMKRIDTNGDGLVS 349
>AF099925-16|AAC69511.1| 482|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform b protein.
Length = 482
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 35 NASEALEFLLTLEQHDRWGNKRIVLDCNAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMD 94
NA E +F + +K+ + +A N+ ++ ++ ++V +
Sbjct: 244 NAPEFADFERIIRARAIENSKKAMRVVDADNSGTLTLDEAKRVAFEHYGFDEATLAPFFG 303
Query: 95 DHWENEVTEYGAVNITGFRIVDHSRKIVRDFMEGLRRMDPRFKGTIS 141
ENE + V GFR V +R VRD M+ ++R+D G +S
Sbjct: 304 QADENEDGQLDNVEFAGFRSVIRARS-VRDAMDKMKRIDTNGDGLVS 349
>AF099925-15|AAC69510.2| 585|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform a protein.
Length = 585
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 35 NASEALEFLLTLEQHDRWGNKRIVLDCNAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMD 94
NA E +F + +K+ + +A N+ ++ ++ ++V +
Sbjct: 244 NAPEFADFERIIRARAIENSKKAMRVVDADNSGTLTLDEAKRVAFEHYGFDEATLAPFFG 303
Query: 95 DHWENEVTEYGAVNITGFRIVDHSRKIVRDFMEGLRRMDPRFKGTIS 141
ENE + V GFR V +R VRD M+ ++R+D G +S
Sbjct: 304 QADENEDGQLDNVEFAGFRSVIRARS-VRDAMDKMKRIDTNGDGLVS 349
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 35 NASEALEFLLTLEQHDRWGNKRIVLDCNAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMD 94
NA E +F + +K+ + +A N+ ++ ++ ++V +
Sbjct: 244 NAPEFADFERIIRARAIENSKKAMRVVDADNSGTLTLDEAKRVAFEHYGFDEATLAPFFG 303
Query: 95 DHWENEVTEYGAVNITGFRIVDHSRKIVRDFMEGLRRMDPRFKGTIS 141
ENE + V GFR V +R VRD M+ ++R+D G +S
Sbjct: 304 QADENEDGQLDNVEFAGFRSVIRARS-VRDAMDKMKRIDTNGDGLVS 349
>U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical
protein K08F11.2 protein.
Length = 886
Score = 31.1 bits (67), Expect = 1.9
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 247 KVATWSDVRGLQLVSQKHVQLKSPASYDINRTYIVTTVLQEPYLMPKPFEFGQKEEQFHG 306
+++ D+R + QK++Q S+ + T+ T + QE ++ +Q++
Sbjct: 305 RISREEDIRNFMIDFQKYLQQNDSQSFQVQLTHWQTIIFQEKCRFSN--NQLRRVKQYYK 362
Query: 307 FCKDLADLVAKRLGIKYELRI-TKDNRKTEELFSEGSSRLVDDIVRKDADIAVAP 360
DL + L ++ + R+ T DN K S+G V I+ D + +V P
Sbjct: 363 MFTDLEIMPTINLTMQLKTRMSTIDNYKATTYISKGEKVTVVKII--DVEKSVIP 415
>U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical
protein K08D10.1 protein.
Length = 895
Score = 31.1 bits (67), Expect = 1.9
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 247 KVATWSDVRGLQLVSQKHVQLKSPASYDINRTYIVTTVLQEPYLMPKPFEFGQKEEQFHG 306
+++ D+R + QK++Q S+ + T+ T + QE ++ +Q++
Sbjct: 305 RISREEDIRNFMIDFQKYLQQNDSQSFQVQLTHWQTIIFQEKCRFSN--NQLRRVKQYYK 362
Query: 307 FCKDLADLVAKRLGIKYELRI-TKDNRKTEELFSEGSSRLVDDIVRKDADIAVAP 360
DL + L ++ + R+ T DN K S+G V I+ D + +V P
Sbjct: 363 MFTDLEIMPTINLTMQLKTRMSTIDNYKATTYISKGEKVTVVKII--DVEKSVIP 415
>Z83234-5|CAB70171.2| 640|Caenorhabditis elegans Hypothetical
protein K09E4.2 protein.
Length = 640
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 440 LSGRIVGTVWWFFALILVCSYTANLAAYLIVERIAAPMQSISYTSTLPNIEVRANAL 496
LS + + WW AL+ VC + +LIV R A P S+S TL +E R L
Sbjct: 386 LSWNVYPSTWWSSALLHVCHVI--IFWHLIVTRPARPGDSVS-RETLRRLEQRQKML 439
>AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl trna
synthetase protein2 protein.
Length = 551
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 59 LDCNAKNAKSILVEHVRKVQLGRRTYHYMLSG 90
+DC + +LV+ V K +G R + +MLSG
Sbjct: 206 IDCTKTLVRDVLVKSVEKRLMGNRNFGFMLSG 237
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 206 SRLIKKTDIEGLTGNISFNEEGHRY-NFTLNVVEMTVQSAMLKVATWSDVRG-LQLVSQK 263
SR+ +T + G+TGN+S + G RY +++L ++ VQ+ ++VA +S L+ V Q
Sbjct: 431 SRMWGRTFV-GITGNVSIDHNGDRYSDYSLLDLD-PVQNRFVEVAYYSGASNQLKTVGQL 488
Query: 264 H 264
H
Sbjct: 489 H 489
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 206 SRLIKKTDIEGLTGNISFNEEGHRY-NFTLNVVEMTVQSAMLKVATWSDVRG-LQLVSQK 263
SR+ +T + G+TGN+S + G RY +++L ++ VQ+ ++VA +S L+ V Q
Sbjct: 384 SRMWGRTFV-GITGNVSIDHNGDRYSDYSLLDLD-PVQNRFVEVAYYSGASNQLKTVGQL 441
Query: 264 H 264
H
Sbjct: 442 H 442
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 206 SRLIKKTDIEGLTGNISFNEEGHRY-NFTLNVVEMTVQSAMLKVATWSDVRG-LQLVSQK 263
SR+ +T + G+TGN+S + G RY +++L ++ VQ+ ++VA +S L+ V Q
Sbjct: 431 SRMWGRTFV-GITGNVSIDHNGDRYSDYSLLDLD-PVQNRFVEVAYYSGASNQLKTVGQL 488
Query: 264 H 264
H
Sbjct: 489 H 489
>AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical
protein T15B7.1 protein.
Length = 307
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 62 NAKNAKSILVEHVRKVQLGRRTYHYMLSGLVMDDHWENEV 101
N+KNA H Q+G +T +Y L L MD W N +
Sbjct: 180 NSKNATDFWFGHYFDFQVGSKTQNYPLLDLTMD--WANPI 217
>AC084197-25|AAK68591.1| 609|Caenorhabditis elegans Hypothetical
protein Y73B6BL.19 protein.
Length = 609
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 416 SIWNSFWFSLGSFMQQG-SDVVPKSLSGRIVGTV 448
SI ++FW+++ + G D+VP ++ G+IVG V
Sbjct: 357 SIPSAFWYTIVTLTTLGYGDMVPSTIMGKIVGGV 390
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,597,710
Number of Sequences: 27539
Number of extensions: 480893
Number of successful extensions: 1224
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1146
Number of HSP's gapped (non-prelim): 62
length of query: 500
length of database: 12,573,161
effective HSP length: 84
effective length of query: 416
effective length of database: 10,259,885
effective search space: 4268112160
effective search space used: 4268112160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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