GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000566-TA|BGIBMGA000566-PA|IPR001828|Extracellular
ligand-binding receptor
         (201 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.68 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   2.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   3.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 0.68
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 152  DIIYMYDSHDENGGFINRKLYSSPGITAESVP 183
            ++I    S DE GG I R   SSPG T    P
Sbjct: 999  NVIKSTSSADETGGVIKRSGSSSPGGTGGGSP 1030


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 150 WKDIIYMYDSHDENGGFINRKLYSSPGITAESVPPIIK 187
           W+ ++   D  D N   +N +L+   G  A+++P + K
Sbjct: 53  WRFLLQCLDDLDRNLRKLNSRLFVIRGQPADALPKLFK 90


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 37  NVFKYAMTMHNQNITGRRFELQAYVDVINTADAFKLSRLICNQ 79
           ++ K   T  ++NITG   E +   +V   +  F  + L CN+
Sbjct: 947 HIQKLMQTEPHENITGMEMEFKKLSNVKADSTRFVTANLPCNK 989


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.135    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,111
Number of Sequences: 2123
Number of extensions: 8374
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 3
length of query: 201
length of database: 516,269
effective HSP length: 61
effective length of query: 140
effective length of database: 386,766
effective search space: 54147240
effective search space used: 54147240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)