Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000565-TA|BGIBMGA000565-PA|IPR003198|Amidinotransferase
         (263 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   0.77 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 4/99 (4%)

Query: 139 LAETFPEFPCTPIKMSKGAEHLKKYITVAGDDVLCVGASQEAKELLKRM-EREANFSYQT 197
           LA  FPE     I+   G+       TVAGD VL   A++  ++ +  + E    F  + 
Sbjct: 153 LAWEFPENKPKKIRSKLGSIWHSVKKTVAGDKVLDENAAEHREQFVSLVRELRGAFKAEN 212

Query: 198 LSVPEDEAANCLYVNGTLVHRAIEEIPEAFKVFCEKIDF 236
           L V      N   VN T+ +      P    V  E  DF
Sbjct: 213 LLVTLTVLPN---VNSTVYYDPRALSPNLEFVVLEAFDF 248


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 199 SVPEDEAANCLYVNGTLVHRAIEEIPEAFK 228
           ++   +A   +Y  GT+ H   EE+ E  K
Sbjct: 525 TIESQDAITRIYACGTMWHETPEEMMEFLK 554


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 199 SVPEDEAANCLYVNGTLVHRAIEEIPEAFK 228
           ++   +A   +Y  GT+ H   EE+ E  K
Sbjct: 525 TIESQDAITRIYACGTMWHETPEEMMEFLK 554


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,307
Number of Sequences: 317
Number of extensions: 2004
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 263
length of database: 114,650
effective HSP length: 56
effective length of query: 207
effective length of database: 96,898
effective search space: 20057886
effective search space used: 20057886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)