GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000564-TA|BGIBMGA000564-PA|IPR001382|Glycoside
hydrolase, family 47
         (533 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   1.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    25   1.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   2.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   2.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   5.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   7.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   7.0  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   7.0  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   7.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 258 AAAAVSEKIHQLPKKHGLVPIFINP 282
           AA AVS+    LP   G VP++I P
Sbjct: 383 AAPAVSKARQFLPALPGYVPVYIRP 407


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 258 AAAAVSEKIHQLPKKHGLVPIFINP 282
           AA AVS+    LP   G VP++I P
Sbjct: 208 AAPAVSKARQFLPALPGYVPVYIRP 232


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 396 YLTYAAHPTFLAPEITHFNLASTTDDMY 423
           YL + A   F  P++T F   S  +D Y
Sbjct: 161 YLAWVASLAFCIPQLTIFTYTSVGEDEY 188


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 148 GKQWIKEELIFTKNKDVNFFEVTIRILGGL 177
           G  WI    I+ K  ++ FFE++  ILG L
Sbjct: 56  GTCWIIYVRIYCK--EIRFFEISFEILGSL 83


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 354 SEAFNPKMDHLTCFLPGTLALGHLNGLPDWHMTMAEELLYTCYLTYA 400
           ++   PK D+        LA G L+GL       ++  L+TC  T A
Sbjct: 834 NKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNA 880


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 446 QITGNTTYQEWGWQIFQGFEKYAKVPNG 473
           ++ G+ TY +  W+   G ++    PNG
Sbjct: 34  KVVGDETYCDRYWECVNGQQELYDCPNG 61


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 265 KIHQLPKKHGLVPIFINPNTGHFLPHATITL 295
           K   +P    ++PI I+P+T + +P   I L
Sbjct: 427 KFDIVPNGKTVIPIKISPSTANMVPQEGIHL 457


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 363 HLTCFLPGTLALGHLNGLPDWHMTMAEELLY 393
           H+     G    G ++ L DW MT  EEL +
Sbjct: 53  HILYAFVGLREDGSVSVLDDWEMTGLEELAH 83


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 363 HLTCFLPGTLALGHLNGLPDWHMTMAEELLY 393
           H+     G    G ++ L DW MT  EEL +
Sbjct: 53  HILYAFVGLREDGSVSVLDDWEMTGLEELAH 83


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,203
Number of Sequences: 317
Number of extensions: 5365
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 9
length of query: 533
length of database: 114,650
effective HSP length: 60
effective length of query: 473
effective length of database: 95,630
effective search space: 45232990
effective search space used: 45232990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)