Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000564-TA|BGIBMGA000564-PA|IPR001382|Glycoside
hydrolase, family 47
(533 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0) 272 3e-73
SB_39877| Best HMM Match : No HMM Matches (HMM E-Value=.) 269 4e-72
SB_7286| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0.4) 113 4e-25
SB_25089| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 3e-12
SB_23159| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1e-24) 58 2e-08
SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.3
SB_54656| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_840| Best HMM Match : Ornatin (HMM E-Value=3.4) 30 4.1
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 30 4.1
SB_4341| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
>SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)
Length = 758
Score = 272 bits (668), Expect = 3e-73
Identities = 146/315 (46%), Positives = 198/315 (62%), Gaps = 13/315 (4%)
Query: 113 KPVSGMASDWFSLGLTIVDSLDTAYIMGLTDVFEEGKQWIKEELIFTKNKDVNFFEVTIR 172
K VS + + WF L L + MG V E G++ I T++ +F E++
Sbjct: 455 KAVSTINAFWFLL-LRRTTPIKWYDYMGFEGVVESGRE------INTRS---SFTEISAL 504
Query: 173 ILGGLLTNHYFTQDQLFLD-KAIDLGDRLMAAFSSPSGIPYSDVNLGARTAHAPEWSHYS 231
L + + L L + ++LGDRL+ F+S SGIP+SDVNL R H P W S
Sbjct: 505 ALCQKQKRRICSNEGLMLKTRGVELGDRLLPCFNSQSGIPFSDVNLMTRQVHPPRWGPDS 564
Query: 232 TTAEVTTVQLEFRQLSRASGNPIFEEAAAAVSEKIHQLPKKHGLVPIFINPNTGHFLPHA 291
+ +EV+T+QLEFR LS +GN +++A V +H LPKK+GLVPIF+N NTG F P A
Sbjct: 565 SVSEVSTIQLEFRDLSYVTGNDKYKQAVDKVMRHLHSLPKKNGLVPIFVNANTGQFRPGA 624
Query: 292 TITLGARGDSYYEYLLKQWLQTGKTINYLLDDYLTGIEGVREFLAKRSSPNKRLFIGELS 351
TITLGARGDSYYEYLLKQWLQTGK ++L +D+ + GV LA+RS PNK L++GEL
Sbjct: 625 TITLGARGDSYYEYLLKQWLQTGKKEDWLKEDFTNSMNGVTSLLARRSHPNKLLYVGELL 684
Query: 352 AGSEAFNPKMDHLTCFLPGTLALGHLNGLPDWHMTMAEELLYTCYLTYAAHPTFLAPEIT 411
G+ +F+PKMDHL CFLPGT+AL NGL ++ A++++ TCY YA P+ L+PEI
Sbjct: 685 HGN-SFSPKMDHLVCFLPGTMALAAHNGLDPKYLEFAKDMMETCYQMYARMPSRLSPEIA 743
Query: 412 HFNL-ASTTDDMYTK 425
+FN T+D+ K
Sbjct: 744 YFNQNPPATEDIIVK 758
Score = 153 bits (371), Expect = 3e-37
Identities = 62/110 (56%), Positives = 85/110 (77%)
Query: 85 NDRQRALVESFRHAWRGYKEHAWGHDNLKPVSGMASDWFSLGLTIVDSLDTAYIMGLTDV 144
N RQ+A++E+FRHAW+GYK+ AWGHD LKP+S S+WF++GLTI+DSLDT ++ L D
Sbjct: 348 NSRQKAVIEAFRHAWKGYKQFAWGHDELKPISKSFSEWFNIGLTIIDSLDTMLLLNLKDE 407
Query: 145 FEEGKQWIKEELIFTKNKDVNFFEVTIRILGGLLTNHYFTQDQLFLDKAI 194
F E + W+ L F KN DVN FEVTIR+LGGLL+ ++ + D +FL+KA+
Sbjct: 408 FREARDWVANSLSFDKNVDVNLFEVTIRVLGGLLSAYHLSNDDIFLNKAV 457
>SB_39877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 269 bits (659), Expect = 4e-72
Identities = 150/437 (34%), Positives = 240/437 (54%), Gaps = 21/437 (4%)
Query: 39 IERGNEDSVQEKLRNTSLNAKPALDNTVQIKYDPTVYERPVFTGPKND---RQRA--LVE 93
I+ E ++E+ R K L++ + K TV + G D RQR + +
Sbjct: 118 IKEEKEKFIEEQKRQKEAAKKAELESLLATKQTGTV---EIIDGAPPDPLTRQRRDFVKK 174
Query: 94 SFRHAWRGYKEHAWGHDNLKPVS--GMASDWF---SLGLTIVDSLDTAYIMGLTDVFEEG 148
+HAW GY +AWG + L+P+S G ++ F S+G T+VD+L T +MG+ + FE G
Sbjct: 175 MMKHAWNGYVTYAWGSNELRPISHTGHSASIFGRGSMGATVVDALSTLKLMGMNEEFERG 234
Query: 149 KQWIKEELIFTKNKDVNFFEVTIRILGGLLTNHYFTQDQLFLDKAIDLGDRLMAAFSSPS 208
++W+ + L F + D++ FE+TIR LGGLL+ + + +++F KA +LGD+L+ AF++P+
Sbjct: 235 RKWVAQNLNFNQASDISVFEMTIRFLGGLLSAYALSGEEVFKVKAKELGDKLLPAFNTPT 294
Query: 209 GIPYSDVNLGARTAHAPEWSH--YSTTAEVTTVQLEFRQLSRASGNPIFEEAAAAVSEKI 266
GIP++ VNL + + H W+ S AE T+ LEF LS +GN ++ + V E +
Sbjct: 295 GIPWAMVNLASGSGHNWGWASGGCSILAEFGTLHLEFVYLSHITGNQVYAKKVHRVREVV 354
Query: 267 HQLPKKHGLVPIFINPNTGHFLPHATITLGARGDSYYEYLLKQWLQTGKTINYLLDDYLT 326
Q+ K +GL P ++NP TG + ++LGA GDS+YEYLLK W+ +GK D Y
Sbjct: 355 DQVQKPNGLYPNYLNPRTGVW-GSQHVSLGALGDSFYEYLLKSWIMSGKMDKKARDMYDK 413
Query: 327 GIEGVREFLAKRSSPNKRLFIGELSAGSEAFNPKMDHLTCFLPGTLALGHLNGLPDWH-M 385
+E + L +RS + ++ E G KMDHL CF G ALG + H +
Sbjct: 414 AVEAIERMLVQRSRKSNLTYLAEYKYG--RLEHKMDHLACFTAGMFALGAKESKNEKHYL 471
Query: 386 TMAEELLYTCYLTYAAHPTFLAPEITHFNLASTTDDMYTKSADAHSLLRPEFIESLWYMY 445
+ EL TC+ Y T + PE F + + ++ + + +LRPE IE +YM+
Sbjct: 472 QLGAELANTCHEAYKRTATGIGPE--SFRFEGNAEAVAIRNNERYYILRPEVIEGWFYMW 529
Query: 446 QITGNTTYQEWGWQIFQ 462
+ T ++ Y++W W+ Q
Sbjct: 530 RFTRDSKYRDWAWEAAQ 546
>SB_7286| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0.4)
Length = 107
Score = 113 bits (271), Expect = 4e-25
Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 428 DAHSLLRPEFIESLWYMYQITGNTTYQEWGWQIFQGFEKYAKVPN-GYSSLTNVKSENPI 486
DAH+LLRPE +ESL+ +Y++T + YQE+GW+IFQ FEK+ ++ + GYSS+ +V+ N
Sbjct: 3 DAHNLLRPETVESLYILYRLTKDKKYQEYGWEIFQAFEKHTRIASGGYSSINSVRQLNHG 62
Query: 487 PRDMMESFFLSETXXXXXXXXSDDRFLIDLNKYVVNSEAHPLPIH 531
RD MESFFL ET S D ++ L+K+V N+EAHPLPIH
Sbjct: 63 YRDKMESFFLGETLKYLFLLFS-DLDVVPLDKFVFNTEAHPLPIH 106
>SB_25089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 70.5 bits (165), Expect = 3e-12
Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 95 FRHAWRGYKEHAWGHDNLKPV--SGMASDWFS---------LG---LTIVDSLDTAYIMG 140
F + Y +A+ HD L P+ +G D + LG LT+V++L T +MG
Sbjct: 113 FYFGYESYMRYAFPHDELDPIHCTGRGPDRKNPTNININDVLGDYSLTLVEALGTLAVMG 172
Query: 141 LTDVFEEGKQWIKEELIFTKNKDVNFFEVTIRILGGLLTNHYFTQDQL------------ 188
+ F+ Q + + + F + V FE IR+LG LL+ H +D L
Sbjct: 173 NSTEFKLAVQHVIDNVHFDRKSTVQVFEANIRVLGSLLSAHMIIKDPLQPFGDMSPDDYD 232
Query: 189 --FLDKAIDLGDRLMAAFS-SPSGIPYSDVNLGARTAHAPEWSHYSTTAEVTTVQLEFRQ 245
L A DL +RL+ AF+ SP+GIPY VNL + A + A ++ LEF
Sbjct: 233 DELLTLAHDLANRLVDAFNKSPTGIPYPRVNL--TSGEALRDRSDTCLAGAGSLLLEFGV 290
Query: 246 LSRASGNPIFEE-AAAAVSEKIHQLPKK----HGLVPIFINPN 283
LSR G+P FE A AV+ Q K G P+++N N
Sbjct: 291 LSRLLGDPSFENLARKAVNMLWAQSRLKCLEGSGETPVYVNVN 333
>SB_23159| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1e-24)
Length = 257
Score = 57.6 bits (133), Expect = 2e-08
Identities = 74/277 (26%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 203 AFSSPSGIPYSDVNL--GARTAHAPEWSHYSTTAEVTTVQLEFRQLSRASGNPIFEEAAA 260
AF +P+G+PY VNL G P + T+ T +EF +S +G+ F + A
Sbjct: 9 AFDTPTGMPYGTVNLLYGVPKGETP----ITCTSGCGTFVIEFGTISALTGDQRFMDTAM 64
Query: 261 AVSEKIHQLPKKHGLVPIFINPNTGHFLPHATITLGARGDSYYEYLLKQWLQTGKTINYL 320
E + + GLV I+ +G + +GA DSY+EYLLK + G L
Sbjct: 65 GALEGLWNSKSEIGLVGNHIDVVSGKWTA-LDAGIGAGVDSYFEYLLKGAILFGDP--KL 121
Query: 321 LDDYLTGIEGVREFLAKRSSPNKRLFIGELSAGSEAFNPKMDHLTCFLPGTLAL-GHLNG 379
++ + E + + KR + ++ GS P L F PG L G +
Sbjct: 122 MEMF----EELYGSIQKRLKFSDWYVWANMNKGSITM-PIFQSLEAFWPGLQVLYGDIGA 176
Query: 380 LPDWHMTMAEELLYTCYLTYAAHPTFLAPEITHFNLASTTDDMYTKSADAHSLLRPEFIE 439
+ E ++ + Y P F F +AS + + + LRPE IE
Sbjct: 177 -----ASRTIEKYHSVWREYGFLPEF-------FQIAS---GVPVSGREGYP-LRPELIE 220
Query: 440 SLWYMYQITGNTTYQEWGWQIFQGFEKYAKVPNGYSS 476
S Y+Y+ T + + E G I + E AK GY++
Sbjct: 221 SAVYLYRATKDPFFLEMGRDIVESIEASAKTLCGYAT 257
>SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 32 SKTGIVIIERGNEDSVQEKLRNTSLNAKPALDNTVQIKYDPTVYERPVFTGPKNDRQRAL 91
S + + + R S+ LRN ++ KP D+ + I+ T Y PK+ +QR
Sbjct: 253 SHSTVEVPVRPRSTSLPPGLRNPAVYLKPGRDHNLHIRARQTPY-------PKSTQQRYP 305
Query: 92 VESFRHAWRGYKEHAWGHDNLKPVSGM 118
V F W+ + A G L VS M
Sbjct: 306 VPDFLVDWQCCRATAMGRHRLARVSTM 332
>SB_54656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 335 LAKRSSPNKRLFIGELSAGSEAFNPKMDHLTCFLPGTLALGH 376
L ++ PN R + AG P H+ C GT LGH
Sbjct: 26 LPRKGKPNPRELEWSVLAGVHLARPDHQHVACLATGTKCLGH 67
>SB_840| Best HMM Match : Ornatin (HMM E-Value=3.4)
Length = 254
Score = 30.3 bits (65), Expect = 4.1
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 400 AAHPTFLAPEITHFNLASTTDDMYTKSADAHSLLRPEFIESLWYMYQ-ITGNTTYQEWGW 458
A P + FN +++ K L E +ESLWY YQ +TG T+ E+ +
Sbjct: 37 ADKPVQAGSGVNVFNSDERSNNHGRKMPFTFGPLTEERLESLWYFYQAVTGQTSRSEYAF 96
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 155 ELIFTKNKDVNFFEVTIRILGGLLTNHYFTQDQLFLDKAIDLGDRLM 201
E + ++N D+ F EVT RILG + + Q QLFL++A +R M
Sbjct: 193 EKVRSENPDLPFHEVT-RILGNMWSQLPTPQKQLFLEEAEKDKERYM 238
>SB_4341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 29.5 bits (63), Expect = 7.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 393 YTCYLTYAAHPTFLAPEITHFNLASTTDDMYTKSADAHSLLRPEFIESLWYMYQITGNTT 452
+T LTY T L + +F++ S +MY SA S+ P I W++ N
Sbjct: 99 WTAILTYNWFVTNLLTQAFYFSITSLAGNMYLNSALMMSVGYP-LIPLAWFLQLSIMNDG 157
Query: 453 YQEWGWQI 460
Q+ WQ+
Sbjct: 158 NQKAIWQL 165
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 300 DSYYEYLLKQWLQTGKTINYLLDDYLTGIEGVREFLAKRSSPNKRL 345
+SY+ L +++ KT NYL+ D L +E V+E + K P+ ++
Sbjct: 541 ESYFFDLYREYDGEAKTKNYLVSDLLHELE-VKESITKACDPSTKV 585
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,467,618
Number of Sequences: 59808
Number of extensions: 723445
Number of successful extensions: 1342
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1319
Number of HSP's gapped (non-prelim): 14
length of query: 533
length of database: 16,821,457
effective HSP length: 85
effective length of query: 448
effective length of database: 11,737,777
effective search space: 5258524096
effective search space used: 5258524096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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