Silkworm BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000563-TA|BGIBMGA000563-PA|IPR005962|Tyrosine
3-monooxygenase, IPR001273|Aromatic amino acid hydroxylase
         (561 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66497-9|CAA91286.1|  457|Caenorhabditis elegans Hypothetical pr...   411   e-115
AF119388-1|AAD31643.1|  457|Caenorhabditis elegans phenylalanine...   409   e-114
U80836-2|AAV58890.1|  454|Caenorhabditis elegans Abnormal catech...   396   e-110
U21308-14|ABB88222.1|  429|Caenorhabditis elegans Tryptophan hyd...   320   2e-87
U21308-13|ABB88221.1|  532|Caenorhabditis elegans Tryptophan hyd...   320   2e-87
AF135186-1|AAD30115.1|  532|Caenorhabditis elegans tryptophan hy...   320   2e-87
U80836-1|AAV58889.1|  393|Caenorhabditis elegans Abnormal catech...   265   5e-71
Z30317-3|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr...    29   6.6  
AF194964-1|AAF28314.1|  632|Caenorhabditis elegans polo-like kin...    29   8.7  
AC024201-9|AAF36014.1|  632|Caenorhabditis elegans Polo kinase p...    29   8.7  
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl...    29   8.7  

>Z66497-9|CAA91286.1|  457|Caenorhabditis elegans Hypothetical
           protein K08F8.4 protein.
          Length = 457

 Score =  411 bits (1012), Expect = e-115
 Identities = 203/417 (48%), Positives = 283/417 (67%), Gaps = 7/417 (1%)

Query: 145 MRDGMGSLARILKTIDNYKGCVQHLETRPSQVTGVQFDALVKVSMTRINL-IQLIRSLRQ 203
           +R+  G+LA  LK    +   + H+E+RPS+     ++ LV+ +    +  I+ +    Q
Sbjct: 36  LREKAGALAETLKLFQAHDVNLSHIESRPSKTHEGCYEVLVEFAEAEDHRKIEGVIEHFQ 95

Query: 204 STAFAGVNLLTENNISSK-----TPWFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDY 258
             A   V L+ + N  +K      PWFP+  +D+D   + +  Y  ELD +HPGF D  Y
Sbjct: 96  QKAEKKV-LVQDWNTKNKQNKDSVPWFPQKINDIDQFANRILSYGAELDADHPGFKDMTY 154

Query: 259 RERRKQIAEIAFAYKYGDPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQ 318
           RERRK  A+IAF +K+GD IP+I YT+ E  TW+ V+N +  + PK+AC+E+   F  LQ
Sbjct: 155 RERRKFFADIAFNFKHGDKIPTITYTDEEIATWRTVYNELTVMYPKNACQEFNYIFPLLQ 214

Query: 319 AADIFVPHRIPQLEDVSSFLRKHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHNNS 378
               F P RIPQL+DVS FL+  TG+T+RP AGLL++RDFLA LAFRVF STQY+RH+++
Sbjct: 215 QNCGFGPDRIPQLQDVSDFLKDCTGYTIRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSA 274

Query: 379 PFHTPEPDCIHELLGHIPLLADPSFAQFSQEIGLASLGASDSEIEKLSTVYWFTVEFGLC 438
           P +TPEPD  HELLGH+PL AD  FAQFSQEIGLASLGA D  IEKL+T+YWFT+EFG+C
Sbjct: 275 PKYTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLGAPDDVIEKLATLYWFTIEFGIC 334

Query: 439 KENQQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQPIYYVAETFED 498
           +++ + KAYGA LLSS GEL +ALSDKPE+  F+PA   V  Y   EYQP Y++AE+F  
Sbjct: 335 QQDGEKKAYGAGLLSSFGELQYALSDKPEVVDFDPAVCCVTKYPITEYQPKYFLAESFAS 394

Query: 499 AKDKFRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAVKKL 555
           AK+K + W +T++RPF++R+N +T+RVE+LD V  L+ L   + +++  L  A+ K+
Sbjct: 395 AKNKLKSWAATINRPFQIRYNAYTQRVEILDKVAALQRLARDIRSDISTLEEALGKV 451


>AF119388-1|AAD31643.1|  457|Caenorhabditis elegans phenylalanine
           hydroxylase protein.
          Length = 457

 Score =  409 bits (1008), Expect = e-114
 Identities = 203/418 (48%), Positives = 282/418 (67%), Gaps = 9/418 (2%)

Query: 145 MRDGMGSLARILKTIDNYKGCVQHLETRPSQVTGVQFDA---LVKVSMTRINLIQLI--- 198
           +R+  G+LA  LK    +   + H+E+RPS++          L+K+  T + L +L+   
Sbjct: 36  LREKAGALAETLKLFQAHDVNLSHIESRPSRLMKDAMRCSLNLLKLK-TIVRLKELLSIS 94

Query: 199 -RSLRQSTAFAGVNLLTENNISSKTPWFPRHASDLDNCNHLMTKYEPELDMNHPGFADKD 257
            + L++   F      T+ N  S  PWFP+  +D+D   + +  Y  ELD +HPGF D  
Sbjct: 95  NKKLKRRFLFKTGTPKTKQNKDS-VPWFPQKINDIDQFANRILSYGAELDADHPGFKDMT 153

Query: 258 YRERRKQIAEIAFAYKYGDPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKL 317
           YRERRK  A+IAF +K+GD IP+I YT+ E  TW+ V+N +  + PK+AC+E+   F  L
Sbjct: 154 YRERRKFFADIAFNFKHGDKIPTITYTDEEIATWRTVYNELTVMYPKNACQEFNYIFPLL 213

Query: 318 QAADIFVPHRIPQLEDVSSFLRKHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHNN 377
           Q    F P RIPQL+DVS FL+  TG+T+RP AGLL+ RDFLA  AFRVF STQY+RH++
Sbjct: 214 QQNCGFGPDRIPQLQDVSDFLKDCTGYTIRPVAGLLSPRDFLAGWAFRVFHSTQYIRHHS 273

Query: 378 SPFHTPEPDCIHELLGHIPLLADPSFAQFSQEIGLASLGASDSEIEKLSTVYWFTVEFGL 437
           +P +TPEPD  HELLGH+PL AD  FAQFSQEIGLASLGA D  IEKL+T+YWFT+EFG+
Sbjct: 274 APKYTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLGAPDDVIEKLATLYWFTIEFGI 333

Query: 438 CKENQQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQPIYYVAETFE 497
           C+++ + KAYGA LLSS GEL +ALSDKPE+  F+PA   V  Y   EYQP Y++AE+F 
Sbjct: 334 CQQDGEKKAYGAGLLSSFGELQYALSDKPEVVDFDPAVCCVTKYPITEYQPKYFLAESFA 393

Query: 498 DAKDKFRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAVKKL 555
            AK+K + W +T++RPF++R+N +T+RVE+LD V  L+ L   + +++  L  A+ K+
Sbjct: 394 SAKNKLKSWAATINRPFQIRYNAYTQRVEILDKVAALQRLARDIRSDISTLEEALGKV 451


>U80836-2|AAV58890.1|  454|Caenorhabditis elegans Abnormal
           catecholamine distributionprotein 2, isoform b protein.
          Length = 454

 Score =  396 bits (975), Expect = e-110
 Identities = 193/406 (47%), Positives = 265/406 (65%), Gaps = 7/406 (1%)

Query: 155 ILKTIDNYKGCVQHLETRPSQVTGVQFDALVKVSMTRINLIQLIRSLRQS-TAFAGVNLL 213
           IL+ + + K  + H+ETR ++ +    D L+    T+  LI     L Q+  A    ++ 
Sbjct: 47  ILQNMSSAKVQICHVETRGNEAS---HDVLLACKATKNQLIHSAELLTQNHVALTKFSIF 103

Query: 214 TENNISSKTP---WFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDYRERRKQIAEIAF 270
            +     K     WFPRH S+LD C+  +TKYEP  D  HPG  D  Y  RRK + + A 
Sbjct: 104 AKKLSDEKNQSQIWFPRHISELDQCSKCITKYEPTTDPRHPGHGDVAYIARRKFLNDQAL 163

Query: 271 AYKYGDPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQAADIFVPHRIPQ 330
            +K+GD I  + YTE E+ TW+ V+  + DL   H C  Y+   + LQ   +    RIPQ
Sbjct: 164 EFKFGDEIGYVDYTEEEHATWKAVYEKLGDLHLSHTCAVYRQNLKILQEEKVLTADRIPQ 223

Query: 331 LEDVSSFLRKHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHNNSPFHTPEPDCIHE 390
           + DV+ FL+K TGF LRP +GLL+ARDFLASLAFRVFQ+T Y+RH+ SP H+PEPD IHE
Sbjct: 224 IRDVNKFLQKKTGFELRPCSGLLSARDFLASLAFRVFQTTTYLRHHKSPHHSPEPDLIHE 283

Query: 391 LLGHIPLLADPSFAQFSQEIGLASLGASDSEIEKLSTVYWFTVEFGLCKENQQLKAYGAA 450
           LLGH+P+ +DP  AQ SQ+IGL SLGASD  IEKLSTVYWF VEFGLCKE+ +LKA GA 
Sbjct: 284 LLGHVPMFSDPLLAQMSQDIGLMSLGASDEHIEKLSTVYWFIVEFGLCKEDGKLKAIGAG 343

Query: 451 LLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQPIYYVAETFEDAKDKFRRWVSTM 510
           LLS+ GEL+HA SD PE + F+PA T+VQ Y+D +YQP+Y+VA++  DA  K R++ S+M
Sbjct: 344 LLSAYGELMHACSDAPEHKDFDPAVTAVQKYEDDDYQPLYFVADSIHDALAKLRKYASSM 403

Query: 511 SRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAVKKLK 556
            RPF V ++P T+ +E ++S   LE    +L+ ++  +T+A  ++K
Sbjct: 404 DRPFSVVYDPFTKSIEAIESSADLEKAFSRLSNDLSAITHAADRMK 449


>U21308-14|ABB88222.1|  429|Caenorhabditis elegans Tryptophan
           hydroxylase protein1, isoform b protein.
          Length = 429

 Score =  320 bits (786), Expect = 2e-87
 Identities = 158/350 (45%), Positives = 221/350 (63%), Gaps = 13/350 (3%)

Query: 216 NNISSKTPWFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDYRERRKQIAEIAFAYKYG 275
           ++ ++ + WFP+   DLD C   +  Y   LD +HPGF D +YR+RR   AE+A  YK+G
Sbjct: 76  DDATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELALNYKHG 135

Query: 276 DPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQAADIFVPHRIPQLEDVS 335
           +PIP   YT  E  TW  ++  + +L  KHAC+++   FE L+    +  + IPQLED+ 
Sbjct: 136 EPIPRTEYTSSERKTWGIIYRKLRELHKKHACKQFLDNFELLERHCGYSENNIPQLEDIC 195

Query: 336 SFLRKHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHNNSPFHTPEPDCIHELLGHI 395
            FL+  TGF +RP AG L+ARDFLA LA+RVF  TQYVRH+  PF+TPEPD +HEL+GH+
Sbjct: 196 KFLKAKTGFRVRPVAGYLSARDFLAGLAYRVFFCTQYVRHHADPFYTPEPDTVHELMGHM 255

Query: 396 PLLADPSFAQFSQEIGLASLGASDSEIEKLSTVYWFTVEFGL---------CKEN----Q 442
            L ADP FAQFSQEIGLASLGAS+ +++KL+T+Y+F++EFGL          KEN    +
Sbjct: 256 ALFADPDFAQFSQEIGLASLGASEEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHE 315

Query: 443 QLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQPIYYVAETFEDAKDK 502
           + K YGA LLSS GEL HA+     +  F+P     Q      +Q  Y+    FE+A+ K
Sbjct: 316 RFKVYGAGLLSSAGELQHAVEGSATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQK 375

Query: 503 FRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAV 552
            R + + M RPF VR+NP+TE VEVL++   +   +  L +++  L  A+
Sbjct: 376 LRMFTNNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 425


>U21308-13|ABB88221.1|  532|Caenorhabditis elegans Tryptophan
           hydroxylase protein1, isoform a protein.
          Length = 532

 Score =  320 bits (786), Expect = 2e-87
 Identities = 158/350 (45%), Positives = 221/350 (63%), Gaps = 13/350 (3%)

Query: 216 NNISSKTPWFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDYRERRKQIAEIAFAYKYG 275
           ++ ++ + WFP+   DLD C   +  Y   LD +HPGF D +YR+RR   AE+A  YK+G
Sbjct: 179 DDATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELALNYKHG 238

Query: 276 DPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQAADIFVPHRIPQLEDVS 335
           +PIP   YT  E  TW  ++  + +L  KHAC+++   FE L+    +  + IPQLED+ 
Sbjct: 239 EPIPRTEYTSSERKTWGIIYRKLRELHKKHACKQFLDNFELLERHCGYSENNIPQLEDIC 298

Query: 336 SFLRKHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHNNSPFHTPEPDCIHELLGHI 395
            FL+  TGF +RP AG L+ARDFLA LA+RVF  TQYVRH+  PF+TPEPD +HEL+GH+
Sbjct: 299 KFLKAKTGFRVRPVAGYLSARDFLAGLAYRVFFCTQYVRHHADPFYTPEPDTVHELMGHM 358

Query: 396 PLLADPSFAQFSQEIGLASLGASDSEIEKLSTVYWFTVEFGL---------CKEN----Q 442
            L ADP FAQFSQEIGLASLGAS+ +++KL+T+Y+F++EFGL          KEN    +
Sbjct: 359 ALFADPDFAQFSQEIGLASLGASEEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHE 418

Query: 443 QLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQPIYYVAETFEDAKDK 502
           + K YGA LLSS GEL HA+     +  F+P     Q      +Q  Y+    FE+A+ K
Sbjct: 419 RFKVYGAGLLSSAGELQHAVEGSATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQK 478

Query: 503 FRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAV 552
            R + + M RPF VR+NP+TE VEVL++   +   +  L +++  L  A+
Sbjct: 479 LRMFTNNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 528


>AF135186-1|AAD30115.1|  532|Caenorhabditis elegans tryptophan
           hydroxylase protein.
          Length = 532

 Score =  320 bits (786), Expect = 2e-87
 Identities = 158/350 (45%), Positives = 221/350 (63%), Gaps = 13/350 (3%)

Query: 216 NNISSKTPWFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDYRERRKQIAEIAFAYKYG 275
           ++ ++ + WFP+   DLD C   +  Y   LD +HPGF D +YR+RR   AE+A  YK+G
Sbjct: 179 DDATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELALNYKHG 238

Query: 276 DPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQAADIFVPHRIPQLEDVS 335
           +PIP   YT  E  TW  ++  + +L  KHAC+++   FE L+    +  + IPQLED+ 
Sbjct: 239 EPIPRTEYTSSERKTWGIIYRKLRELHKKHACKQFLDNFELLERHCGYSENNIPQLEDIC 298

Query: 336 SFLRKHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHNNSPFHTPEPDCIHELLGHI 395
            FL+  TGF +RP AG L+ARDFLA LA+RVF  TQYVRH+  PF+TPEPD +HEL+GH+
Sbjct: 299 KFLKAKTGFRVRPVAGYLSARDFLAGLAYRVFFCTQYVRHHADPFYTPEPDTVHELMGHM 358

Query: 396 PLLADPSFAQFSQEIGLASLGASDSEIEKLSTVYWFTVEFGL---------CKEN----Q 442
            L ADP FAQFSQEIGLASLGAS+ +++KL+T+Y+F++EFGL          KEN    +
Sbjct: 359 ALFADPDFAQFSQEIGLASLGASEEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHE 418

Query: 443 QLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQPIYYVAETFEDAKDK 502
           + K YGA LLSS GEL HA+     +  F+P     Q      +Q  Y+    FE+A+ K
Sbjct: 419 RFKVYGAGLLSSAGELQHAVEGSATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQK 478

Query: 503 FRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAV 552
            R + + M RPF VR+NP+TE VEVL++   +   +  L +++  L  A+
Sbjct: 479 LRMFTNNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 528


>U80836-1|AAV58889.1|  393|Caenorhabditis elegans Abnormal
           catecholamine distributionprotein 2, isoform a protein.
          Length = 393

 Score =  265 bits (650), Expect = 5e-71
 Identities = 133/280 (47%), Positives = 175/280 (62%), Gaps = 7/280 (2%)

Query: 155 ILKTIDNYKGCVQHLETRPSQVTGVQFDALVKVSMTRINLIQLIRSLRQS-TAFAGVNLL 213
           IL+ + + K  + H+ETR ++ +    D L+    T+  LI     L Q+  A    ++ 
Sbjct: 117 ILQNMSSAKVQICHVETRGNEAS---HDVLLACKATKNQLIHSAELLTQNHVALTKFSIF 173

Query: 214 TENNISSKTP---WFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDYRERRKQIAEIAF 270
            +     K     WFPRH S+LD C+  +TKYEP  D  HPG  D  Y  RRK + + A 
Sbjct: 174 AKKLSDEKNQSQIWFPRHISELDQCSKCITKYEPTTDPRHPGHGDVAYIARRKFLNDQAL 233

Query: 271 AYKYGDPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQAADIFVPHRIPQ 330
            +K+GD I  + YTE E+ TW+ V+  + DL   H C  Y+   + LQ   +    RIPQ
Sbjct: 234 EFKFGDEIGYVDYTEEEHATWKAVYEKLGDLHLSHTCAVYRQNLKILQEEKVLTADRIPQ 293

Query: 331 LEDVSSFLRKHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHNNSPFHTPEPDCIHE 390
           + DV+ FL+K TGF LRP +GLL+ARDFLASLAFRVFQ+T Y+RH+ SP H+PEPD IHE
Sbjct: 294 IRDVNKFLQKKTGFELRPCSGLLSARDFLASLAFRVFQTTTYLRHHKSPHHSPEPDLIHE 353

Query: 391 LLGHIPLLADPSFAQFSQEIGLASLGASDSEIEKLSTVYW 430
           LLGH+P+ +DP  AQ SQ+IGL SLGASD  IEKLSTVYW
Sbjct: 354 LLGHVPMFSDPLLAQMSQDIGLMSLGASDEHIEKLSTVYW 393


>Z30317-3|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical
           protein T16G12.5 protein.
          Length = 1142

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 176 VTGVQFDAL-VKVSMTRINLIQLIRSLRQSTAFAGVNLLTENNISSKTPWFPRHASDLDN 234
           V  V+F  L +K+    +N  +L+  L+    F  +  LT++  ++KTP + + A     
Sbjct: 361 VLAVRFQLLQLKIDKYELNFAELVSKLQIDVLFGSLMFLTQDKKTAKTPMWLKVA----- 415

Query: 235 CNHLMTK 241
           C   MTK
Sbjct: 416 CGKQMTK 422


>AF194964-1|AAF28314.1|  632|Caenorhabditis elegans polo-like kinase
           2 protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 2   AVAAAQKNREMFAIKKSYSIENGYPSRRRSLVDDAR--FETLVVKQTKQSVLEEARA 56
           AV    +N+ MF  K S+  ENG P +    +  A+   + LV + TK+     A A
Sbjct: 545 AVTFIDENKRMFTYKFSHLAENGCPEKFLHRIQYAKCMIQRLVEEHTKEETKHNAPA 601


>AC024201-9|AAF36014.1|  632|Caenorhabditis elegans Polo kinase
           protein 2 protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 2   AVAAAQKNREMFAIKKSYSIENGYPSRRRSLVDDAR--FETLVVKQTKQSVLEEARA 56
           AV    +N+ MF  K S+  ENG P +    +  A+   + LV + TK+     A A
Sbjct: 545 AVTFIDENKRMFTYKFSHLAENGCPEKFLHRIQYAKCMIQRLVEEHTKEETKHNAPA 601


>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
            anchorage protein1 protein.
          Length = 8545

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 423  EKLSTVYWFTVEFGLCKENQQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPY- 481
            +K++  +   V  G+ ++N+Q +     + SS+GE L  L    E   +E    S  P  
Sbjct: 1771 QKVTLNHLHVVLEGIPEKNEQDRTDAIDIASSVGEKLGNLKSAVE-EVYEEVLASTNPVK 1829

Query: 482  QDQEYQPIYYV----AETFEDAKDKFRRWVSTMS-RPFEVRFNPHT-ERVEVL---DSVD 532
            +DQ  Q I  V    AE      D+F R    +S    E++ +P   ++ EV    D V 
Sbjct: 1830 EDQPLQHIQEVQTTPAEQSNWDTDEFSRQPPVLSDERIELKTDPSAIDKFEVRSDEDPVP 1889

Query: 533  KLETLIWQLNT 543
            K+  L  QL T
Sbjct: 1890 KIIDLFGQLQT 1900


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.318    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,747,943
Number of Sequences: 27539
Number of extensions: 519768
Number of successful extensions: 1268
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1251
Number of HSP's gapped (non-prelim): 13
length of query: 561
length of database: 12,573,161
effective HSP length: 85
effective length of query: 476
effective length of database: 10,232,346
effective search space: 4870596696
effective search space used: 4870596696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)