Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000563-TA|BGIBMGA000563-PA|IPR005962|Tyrosine
3-monooxygenase, IPR001273|Aromatic amino acid hydroxylase
(561 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17793| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 9e-62
SB_3716| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 5e-05
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 4.3
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_58733| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_42397| Best HMM Match : rve (HMM E-Value=0.0007) 29 9.9
SB_30519| Best HMM Match : Biopterin_H (HMM E-Value=2.4) 29 9.9
SB_39414| Best HMM Match : rve (HMM E-Value=0.0011) 29 9.9
SB_38499| Best HMM Match : TP2 (HMM E-Value=1.5) 29 9.9
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 29 9.9
>SB_17793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 235 bits (574), Expect = 9e-62
Identities = 136/371 (36%), Positives = 207/371 (55%), Gaps = 24/371 (6%)
Query: 145 MRDGMGSLARILKTIDNYKGCVQHLETRPSQVTGVQFDALVKVS-MTRINLIQLIRSLRQ 203
+ + +G+LAR LK +++ + H+E+RPS+ ++D + +L + +L++
Sbjct: 37 LNEEVGALARALKLFEDHHVNMTHIESRPSKACKTRYDFFADCEGLHGASLNHFVDALKK 96
Query: 204 STAFAGVNLLTENNISSKTP-WFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDYRERR 262
+ +L+++ S P + P +S L + P ++HP + + +
Sbjct: 97 RAV--NITVLSDDKGSVSHPSYLPSQSSQL-----VTQSVTP---VSHPSQSPQSVTQ-- 144
Query: 263 KQIAEIAFAYKYGDPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQAADI 322
+ + P ++ Q V +V L+ + + +
Sbjct: 145 -SVTQSVTQLVTQSVTPVSHPSQSPQSVTQSVTQSVTQLVTQSVTPVSHPSQSPQSVTPV 203
Query: 323 F-VPHRIPQLEDVSSFLRKH-TGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHNNSPF 380
V + Q + + + TGFTLRP AGLL++RDFLA LAFRVF STQY+RH P
Sbjct: 204 SSVTKSVTQCSNTNVIVFSECTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPTKPM 263
Query: 381 HTPEP-------DCIHELLGHIPLLADPSFAQFSQEIGLASLGASDSEIEKLSTVYWFTV 433
+TPEP D +HEL+GH+PL ADP FAQFSQEIGLASLGA D +EKL+T+YWFTV
Sbjct: 264 YTPEPTICIVSSDVVHELIGHVPLFADPDFAQFSQEIGLASLGAPDEWVEKLATLYWFTV 323
Query: 434 EFGLCKENQQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQPIYYVA 493
EFGLC++ ++KAYGA LLSS GEL + L+D+P+ P EP TSVQ Y +YQP+Y++A
Sbjct: 324 EFGLCRQEGEVKAYGAGLLSSFGELQYCLTDEPKKYPLEPEKTSVQKYPITQYQPVYFIA 383
Query: 494 ETFEDAKDKFR 504
++F A++K R
Sbjct: 384 DSFLSARNKVR 394
>SB_3716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 46.8 bits (106), Expect = 5e-05
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 168 HLETRPSQVTGVQFDALVKVS-MTRINLIQLIRSLRQSTAFAGVNLLTENNISSKTPWFP 226
H+E+RPS+ ++D + +L + +L++ + +L+++ +S PWFP
Sbjct: 3 HIESRPSKACKTRYDFFADCEGLHGASLNHFVDALKKRAV--NITVLSDDKVS--VPWFP 58
Query: 227 RHASDLDNCNHLMTKYEPELDMNHP 251
R SDLD + Y ELD +HP
Sbjct: 59 RKISDLDKFADRVLSYGAELDSDHP 83
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 30.3 bits (65), Expect = 4.3
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 439 KENQQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQPIYYVAETFED 498
KEN L++ +L + + L H LS+ E EP + ++Q Q I + +E
Sbjct: 3403 KENTDLRSTVRSLKAEVDSLKHRLSEVEEDNRVEPLINELTE-KEQRIQEIERELKVYET 3461
Query: 499 AKDKFR----RWVSTMSRPFEVRFNPHTERVEVLDSV-------DKLETLIWQLNTEMLH 547
+ R ++V R +E+ +T E+ D+ D+LE L + +
Sbjct: 3462 KHTEIRVYEEKYVEIEKRYYELETKYYTVIQEMKDATVDNDITKDELERLKKIVENDEKE 3521
Query: 548 LTNAVKKLKGS 558
N +KL+GS
Sbjct: 3522 KENLKRKLQGS 3532
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 466 PELRPFEPASTSVQ---PYQDQEYQPIYYVAETFEDAKDKFRR 505
P+ P +P +TSV P+ + E++ + Y A T D ++RR
Sbjct: 1135 PQNNPEDPRNTSVSGLTPFTEYEFRVVTYTAPTSGDTSSEWRR 1177
>SB_58733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2060
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 144 HMRDGMGSLARILKTIDNYKGCVQHLETRPSQVTGVQFDALV 185
HMR +L +I+++ ++ ETRP QV G F+AL+
Sbjct: 1917 HMRSMSMALFKIVRSFVRRLSEIEEKETRPDQVLGDLFEALL 1958
>SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 376 NNSPFHTPEPDCIHELLGHIPL-LADPSFAQFSQEIGLASLGASDSEIEKLSTVYWFTVE 434
N+ P H DC+ + + L A FS+ IG S + + + +L+ V W++ +
Sbjct: 511 NSLPLHITNTDCLSKFKSSLKTYLFSMLPASFSRFIGTQSTCRTQTTVLRLTAVRWYSAK 570
Query: 435 FGLCKE 440
G K+
Sbjct: 571 KGKKKK 576
>SB_42397| Best HMM Match : rve (HMM E-Value=0.0007)
Length = 729
Score = 29.1 bits (62), Expect = 9.9
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 388 IHELLGHIPLLAD-----PSFAQFSQEIGLASLGASDS-EIEKLSTVYWFTVEFGLCKEN 441
IH L G AD PS + ++ L S D+ EI +++ + E G +
Sbjct: 404 IHHLPGKSNYAADATSRHPSQSNTEEKAPLCSASPPDAAEIAQMTAIRDTAQELGAI--S 461
Query: 442 QQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQ 487
L A A + +G LLH+L +L +P ++ P + YQ
Sbjct: 462 WTLLAQETAADARMGNLLHSLEQGTQLNKDDPTLANLGPIYESIYQ 507
>SB_30519| Best HMM Match : Biopterin_H (HMM E-Value=2.4)
Length = 362
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 470 PFEPASTSVQPYQDQEYQPIYYVAETFEDAKDKFRRWVSTMSRPFEVRFNPHTERV 525
PF A+T++Q QP + + FR +T+ RPF P++ R+
Sbjct: 150 PFRHATTAIQRPSVTPQQPYTVLPSRYNIETASFRHATTTIQRPFVTLQQPYSVRL 205
>SB_39414| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 269
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 255 DKDYRERRKQIAEIAFAYKYGDPIPSIAYTEIENGTWQRVFNTVLDLMP 303
DKD K Y P+P I TE+ G WQ +L L+P
Sbjct: 2 DKDVESMCKSCELCQLVSSYDPPVP-IVTTEMPKGPWQFCSTDLLGLLP 49
>SB_38499| Best HMM Match : TP2 (HMM E-Value=1.5)
Length = 421
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 470 PFEPASTSVQPYQDQEYQPIYYVAETFEDAKDKFRRWVSTMSRPFEVRFNPHTERV 525
PF A+T++Q QP + + FR +T+ RPF P++ R+
Sbjct: 203 PFRHATTAIQRPSVTPQQPYTVLPSRYNIETASFRHATTTIQRPFVTLQQPYSVRL 258
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 29.1 bits (62), Expect = 9.9
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 388 IHELLGHIPLLAD-----PSFAQFSQEIGLASLGASDS-EIEKLSTVYWFTVEFGLCKEN 441
IH L G AD PS + ++ L S D+ EI +++ + E G +
Sbjct: 406 IHHLPGKSNYAADATSRHPSQSNTEEKAPLCSASPPDAAEIAQMTAIRDTAQELGAI--S 463
Query: 442 QQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSVQPYQDQEYQ 487
L A A + +G LLH+L +L +P ++ P + YQ
Sbjct: 464 WTLLAQETAADARMGNLLHSLEQGTQLNKDDPTLANLGPIYESIYQ 509
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,061,481
Number of Sequences: 59808
Number of extensions: 664267
Number of successful extensions: 1670
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1655
Number of HSP's gapped (non-prelim): 21
length of query: 561
length of database: 16,821,457
effective HSP length: 86
effective length of query: 475
effective length of database: 11,677,969
effective search space: 5547035275
effective search space used: 5547035275
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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