GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000563-TA|BGIBMGA000563-PA|IPR005962|Tyrosine
3-monooxygenase, IPR001273|Aromatic amino acid hydroxylase
         (561 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   5.4  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        25   5.4  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 5.4
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 272 YKYGDPIPSIAYTEIEN-GTWQRVFNTVLDLMPKHACREYKAAFE 315
           YK GD   +I Y  I +     +VF  V+     HACR Y + ++
Sbjct: 606 YKKGDRTDAINYRGITSLCAIAKVFELVIYKNLLHACRSYLSPYQ 650


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 25.0 bits (52), Expect = 5.4
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 371 QYVRHNNSPFHTPEPDCIHELLGHIPLL-ADPSFAQ 405
           Q + H +  +  P+P C    L HI +L ADP   Q
Sbjct: 80  QSLLHEHIKYDVPKPCCAPSSLDHIDVLHADPKNPQ 115


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,144
Number of Sequences: 2123
Number of extensions: 20963
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 2
length of query: 561
length of database: 516,269
effective HSP length: 67
effective length of query: 494
effective length of database: 374,028
effective search space: 184769832
effective search space used: 184769832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)