Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000562-TA|BGIBMGA000562-PA|IPR000210|BTB, IPR003131|K+
channel tetramerisation
(157 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0394 + 3073903-3073954,3074052-3074161,3074234-3074368,307... 60 6e-10
10_08_0144 - 15176059-15176112,15176375-15176455,15176711-151767... 54 5e-08
04_04_0410 - 25010455-25011819 36 0.020
07_03_0093 + 13330867-13332312 35 0.026
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 31 0.32
02_04_0590 - 24154366-24155742 31 0.56
03_02_0628 + 9957385-9957888,9957985-9958111,9958541-9958608,995... 30 0.99
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 28 3.0
06_03_1379 - 29709532-29709843,29709951-29710112,29710193-297110... 28 4.0
12_02_1088 - 25954506-25954652,25954769-25954918,25955011-259551... 27 5.3
03_05_0451 - 24456923-24457069,24457161-24457310,24457408-244575... 27 7.0
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 27 7.0
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 27 7.0
01_06_0655 - 30916396-30916578,30916689-30916748,30916916-309170... 27 7.0
01_01_0766 - 5928283-5929092 27 7.0
04_04_1532 - 34187153-34187308,34187426-34187551,34187856-341879... 27 9.2
02_05_0499 - 29534462-29535315,29535871-29537221 27 9.2
>03_01_0394 +
3073903-3073954,3074052-3074161,3074234-3074368,
3074461-3074616,3074793-3074876,3075069-3075115,
3075305-3075378,3075634-3075692,3076149-3076208,
3076826-3076906,3077033-3077086
Length = 303
Score = 60.5 bits (140), Expect = 6e-10
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
Query: 19 NAPVHIDVGGTIYTSSLETLTAY-PESRLGKMFNG--TIPIVLDTLKQHYFIDRDGGMFR 75
++PV +++GG Y +++ETLT P S L MF+G T+P DT F+DRDG FR
Sbjct: 10 SSPVLLNIGGKRYATTVETLTQREPSSMLAAMFSGRHTLPRHPDT--GMVFVDRDGKHFR 67
Query: 76 HILNFLRNKKLLLPTDFPDMELLLHEAHYFEL 107
H+LN+LR+ + ++ + + LL EA Y++L
Sbjct: 68 HVLNWLRDGAVPDMSE-SEYQQLLREAEYYQL 98
>10_08_0144 -
15176059-15176112,15176375-15176455,15176711-15176770,
15177220-15177278,15177412-15177485,15177595-15177641,
15177852-15177935,15178051-15178212,15178264-15178467,
15178541-15178647,15178746-15178773
Length = 319
Score = 54.0 bits (124), Expect = 5e-08
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 21 PVHIDVGGTIYTSSLETLTAY-PESRLGKMFNGTIPIVLDTLKQH-YFIDRDGGMFRHIL 78
P+ +++GG+ Y ++ +TLT P S L +G L T + F+DRDG +FRH+L
Sbjct: 4 PILLNIGGSRYETTADTLTQRDPGSLLAAALSGAAAHGLPTTEDGAVFVDRDGELFRHVL 63
Query: 79 NFLRNKKLLLPTDFPDMELLLHEAHYFEL 107
N+LR+ + D + LL EA Y+ L
Sbjct: 64 NWLRDGAVPALAD-AEYRQLLREAEYYRL 91
>04_04_0410 - 25010455-25011819
Length = 454
Score = 35.5 bits (78), Expect = 0.020
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 65 YFIDRDGGMFRHILNFLRNKKLLLPTDFPDMELLLHEAHYFE-LDHM 110
YFIDR+ F +L+ LR L +P P+ +LL EA Y+ LDH+
Sbjct: 63 YFIDRNPACFAVLLDLLRTGSLHVPPQLPE-KLLYREALYYGLLDHV 108
>07_03_0093 + 13330867-13332312
Length = 481
Score = 35.1 bits (77), Expect = 0.026
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 22 VHIDVGGTIYTSSLETLTAYPESRLGKMFNGTIPIVLDTLKQHYFIDRDGGMFRHILNFL 81
V ++VGG ++ +++ TL SR G + + +F+DRD +F +L+FL
Sbjct: 6 VTLNVGGEVFQTTVATL-----SRAGAS-SPLASLAPTPASAPHFLDRDPRLFATLLSFL 59
Query: 82 RNKKL--LLPTDFPDMELLLHEAHYFELDHMVFA 113
R +L P P LL EA +F ++ + A
Sbjct: 60 RRGRLAPTSPDSDPPSPALLAEARHFGVEGALLA 93
>10_08_0829 -
20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 31.5 bits (68), Expect = 0.32
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 116 KLKHGREGVKHECEWLSDASDRLKQETELLMQERDRLQQ 154
KLK G E +K EC S L+ E + + ERD L+Q
Sbjct: 345 KLKQGLETLKKECADKSKQQSELELELSISISERDSLRQ 383
>02_04_0590 - 24154366-24155742
Length = 458
Score = 30.7 bits (66), Expect = 0.56
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 22 VHIDVGGTIYTSSLETL-TAYPESRLGKMFN------GTIPIVLDTLKQHYFIDRDGGMF 74
V ++VGG ++ + TL +A ++ LG M + G + YFIDRD F
Sbjct: 8 VRLNVGGRVFETMASTLASAGRDTMLGAMIDASWNHGGGGDGDGEGGADEYFIDRDPECF 67
Query: 75 RHILNFLRNKKLLLPTDFPDMELLLHEAHYFEL 107
+L+ LR L +P D +L EA Y+ L
Sbjct: 68 AVLLDLLRTGGLHVPPHVAD-GVLCREALYYGL 99
>03_02_0628 +
9957385-9957888,9957985-9958111,9958541-9958608,
9958695-9958772,9958885-9958949,9959130-9959196,
9959344-9959526,9959690-9959746,9959857-9959952,
9960061-9960219
Length = 467
Score = 29.9 bits (64), Expect = 0.99
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 101 EAHYFELDHMVFALSKLKHGREGVKHECEWLSDASDRLKQETELLMQERDRLQQR 155
E + E++ MV + LK E +K +CE A +L +E EL+ ++ D+ + +
Sbjct: 375 ETYKKEMEKMVKLIKDLKKDNEFMKSKCENSDVALVKLIEERELMKKQVDKFKNQ 429
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 106 ELDHMVFALSKLKHGREGVKHECEWLSDASDRLKQETELLMQERDRLQQR 155
+L+H+ L KLK R+ E E +K E L +R++LQ++
Sbjct: 658 KLEHVAVELQKLKDERKEATLERERREQELSEIKGTIEALNNQREKLQEQ 707
>06_03_1379 -
29709532-29709843,29709951-29710112,29710193-29711086,
29712741-29712812,29714106-29714210,29714820-29714900
Length = 541
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 8 GIPRVAATTKYNAPVHIDVGGTIYTSSLETLTAYPESRLGKMFNGTIPIVLDT 60
GIP V+A N V I ++++S + TLTA P + + T I++ T
Sbjct: 358 GIPSVSAVEVLNLLVDICTKQSVWSSQVHTLTARPTIMFMNLKHLTYEILIFT 410
>12_02_1088 -
25954506-25954652,25954769-25954918,25955011-25955116,
25955247-25955569,25955656-25955790,25956310-25956444,
25956445-25956525,25956619-25956807,25956935-25957127,
25957244-25957350,25957457-25957531,25957619-25957774,
25957968-25958051,25958152-25958265,25958345-25958440,
25958543-25958633,25958721-25958836,25958934-25959093,
25960390-25960634
Length = 900
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 121 REGVKHECEWLSDASDRLKQETELLMQERDRLQQRWS 157
RE + E L + +L +LLM+E DRLQ++ S
Sbjct: 84 REKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 120
>03_05_0451 -
24456923-24457069,24457161-24457310,24457408-24457513,
24457715-24458040,24458129-24458263,24458350-24458430,
24458516-24458704,24458794-24458986,24459068-24459174,
24459280-24459354,24459446-24459601,24459745-24459828,
24459933-24460046,24460119-24460214,24460302-24460392,
24460500-24460615,24460878-24461037,24461964-24462217
Length = 859
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 121 REGVKHECEWLSDASDRLKQETELLMQERDRLQQRWS 157
RE + E L + +L +LLM+E DRLQ++ S
Sbjct: 87 REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 123
>02_04_0481 +
23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 27.1 bits (57), Expect = 7.0
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 61 LKQHYFIDRDGGMFRHILNFLRNKKLLLPTDFPDMELLLHEAHYFELDHMVFALSKLKHG 120
L+ H +D G + L ++ + P + E L + + LD + +
Sbjct: 626 LEDHEILD-GGKLVEQCLANIQGRAKSSPVECESFEKL--QTQVYTLDQELTLCKIILEE 682
Query: 121 REGVKHECEWLSDASDRLKQETELLMQERDRLQQ 154
+ + E LS R+ QET+ L E+D LQ+
Sbjct: 683 DKADRSEMMRLSGELQRMVQETDALKNEKDSLQK 716
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 106 ELDHMVFALSKLKHGREGVKHECEWLSDASDRLKQETELLMQERDRLQ 153
E+D + AL + E +KH + +D+LKQ+ + E + L+
Sbjct: 815 EVDKLKHALDENNSEIENLKHTLNEKNSETDKLKQDIDATYMEMENLK 862
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 98 LLHEAHYFEL---DHMVFALSKLKHGREGVKHECEWLSDASDRLKQETELLMQE 148
+++ HY E+ D V K+KH + V+ + + + ++K+E E M E
Sbjct: 926 MMNNLHYVEVVYKDPKVMKSEKIKHQTDNVELQPHIIKEKEKKVKEEEEKCMAE 979
>01_06_0655 -
30916396-30916578,30916689-30916748,30916916-30917032,
30917139-30917246,30917301-30917390,30917731-30917799,
30918086-30918178,30918292-30918384,30918540-30918621,
30919467-30919534,30919662-30920684
Length = 661
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 1 MEKKPIPGIPRVAATTKYNAPVHIDVGGTIYTSSLETLTAYPESRLG 47
M+ +PGIP + + + A +H +GG + + P RLG
Sbjct: 284 MDTDDMPGIPALPVSARDAAEIHAALGGDAAPADWQGREGSPVYRLG 330
>01_01_0766 - 5928283-5929092
Length = 269
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 116 KLKHGREGVKHECEWLSDASDRLKQETELLMQERDRLQ 153
K H R G C L+ +D L+Q+ ++L + D L+
Sbjct: 103 KFVHDRIGRCENCPILTSDNDELRQQVDMLRTKNDLLE 140
>04_04_1532 -
34187153-34187308,34187426-34187551,34187856-34187977,
34188058-34188181,34189671-34189821,34190506-34190720,
34191142-34191343,34191423-34191597,34191746-34192055,
34192141-34192356
Length = 598
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 78 LNFLRNKKLLLPTDFPDMELLLHEAHYFELDHMVFALSKLKH--GREGV 124
+ FLR L + +F + L H Y+ELD+ + K+ H GREG+
Sbjct: 534 IKFLRG--LGMSCEFKVYDRLGHSLEYYELDYCQRWVEKILHRSGREGL 580
>02_05_0499 - 29534462-29535315,29535871-29537221
Length = 734
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 47 GKMFNGTIPIVLDTLKQHYFID 68
G NG + + LDT+KQ Y ID
Sbjct: 173 GNATNGFVAVELDTVKQRYDID 194
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.138 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,772,124
Number of Sequences: 37544
Number of extensions: 193043
Number of successful extensions: 458
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 438
Number of HSP's gapped (non-prelim): 20
length of query: 157
length of database: 14,793,348
effective HSP length: 76
effective length of query: 81
effective length of database: 11,940,004
effective search space: 967140324
effective search space used: 967140324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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