GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000561-TA|BGIBMGA000561-PA|undefined
         (66 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   0.79 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   1.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    20   1.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    20   1.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   2.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    19   3.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   4.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    18   7.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          18   7.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 0.79
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 37  DNISTISQFLCPN 49
           D + T+ QFL PN
Sbjct: 649 DGVDTLQQFLTPN 661


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 1.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 38  NISTISQFLCPNQAHLGVA 56
           N  T  +FL PN  +L VA
Sbjct: 108 NCHTFGRFLAPNLTYLLVA 126


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.2 bits (40), Expect = 1.8
 Identities = 9/30 (30%), Positives = 11/30 (36%)

Query: 6   CSSPLLTQTPFSEEDCIRQGGICVRTEECD 35
           C      + P S   C R  GI     +CD
Sbjct: 80  CGDRTQLEPPISSPHCERLYGIFADESKCD 109


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.2 bits (40), Expect = 1.8
 Identities = 9/30 (30%), Positives = 11/30 (36%)

Query: 6   CSSPLLTQTPFSEEDCIRQGGICVRTEECD 35
           C      + P S   C R  GI     +CD
Sbjct: 80  CGDRTQLEPPISSPHCERLYGIFADESKCD 109


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 2.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 29  VRTEECDPDNISTISQ 44
           +R E CDPD    + Q
Sbjct: 180 LREERCDPDRPLPLDQ 195


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 3.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 37  DNISTISQFLCPN 49
           + + T+ QFL PN
Sbjct: 650 NGVDTLQQFLTPN 662


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 4.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 33  ECDPDNISTISQFLCPNQ 50
           + DP+ IS I  F  P +
Sbjct: 514 KADPEKISAIRNFPVPQK 531


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
          protein.
          Length = 533

 Score = 19.0 bits (37), Expect = 4.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 39 ISTISQFLCPNQAHLGVACCYVSNFS 64
          ++TI   L P  A      CY SN++
Sbjct: 7  VATIITLLQPYDATPARIVCYFSNWA 32


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 18.2 bits (35), Expect = 7.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 33   ECDPDNISTISQFLCP 48
            EC PD  ST++    P
Sbjct: 2283 ECHPDASSTMAPSTTP 2298


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 18.2 bits (35), Expect = 7.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)

Query: 29 VRTEECDPDNISTISQFLCPNQA 51
          V+ EE D D+    S     NQA
Sbjct: 9  VKNEEFDSDSKLPFSGLFIENQA 31


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.135    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,034
Number of Sequences: 317
Number of extensions: 563
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 66
length of database: 114,650
effective HSP length: 44
effective length of query: 22
effective length of database: 100,702
effective search space:  2215444
effective search space used:  2215444
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.7 bits)
S2: 34 (17.8 bits)