GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000561-TA|BGIBMGA000561-PA|undefined
         (66 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p pro...    38   0.002
AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-P...    38   0.002
AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-P...    38   0.002
Y11128-1|CAA72010.1|  403|Drosophila melanogaster C901 protein p...    31   0.26 
AE014298-1533|AAF47984.1|  559|Drosophila melanogaster CG1567-PA...    31   0.26 
AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p pro...    29   1.1  
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA...    29   1.1  
AY102699-1|AAM27528.1|  403|Drosophila melanogaster SD09582p pro...    25   9.8  
AE014297-3173|AAF56013.2|  403|Drosophila melanogaster CG5346-PA...    25   9.8  
AE014297-1547|ABC66173.1|  202|Drosophila melanogaster CG34055-P...    25   9.8  

>AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p
          protein.
          Length = 98

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)

Query: 17 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCY 59
          ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY
Sbjct: 47 NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCY 86


>AE013599-3232|AAM70922.1|   98|Drosophila melanogaster
          CG10433-PB, isoform B protein.
          Length = 98

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)

Query: 17 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCY 59
          ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY
Sbjct: 47 NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCY 86


>AE013599-3231|AAF46736.1|  127|Drosophila melanogaster
          CG10433-PA, isoform A protein.
          Length = 127

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)

Query: 17 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCY 59
          ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY
Sbjct: 47 NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCY 86


>Y11128-1|CAA72010.1|  403|Drosophila melanogaster C901 protein
           protein.
          Length = 403

 Score = 30.7 bits (66), Expect = 0.26
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 10  LLTQTPFSEEDCIRQGGICVRTEEC 34
           LL QTP  + DC +Q G C +  EC
Sbjct: 207 LLCQTPICDPDCSKQHGYCRKPGEC 231


>AE014298-1533|AAF47984.1|  559|Drosophila melanogaster CG1567-PA
           protein.
          Length = 559

 Score = 30.7 bits (66), Expect = 0.26
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 10  LLTQTPFSEEDCIRQGGICVRTEEC 34
           LL QTP  + DC +Q G C +  EC
Sbjct: 205 LLCQTPICDPDCSKQHGYCRKPGEC 229


>AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p
          protein.
          Length = 1258

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 31 TEECDPDNISTISQFLCPNQAHLGVACCYVSNFSK 65
          +EEC  D+  T +   C N     V C ++  F K
Sbjct: 23 SEECKDDDALTSTLHTCANDPDFAVICAFLQKFGK 57


>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
          protein.
          Length = 2759

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 31 TEECDPDNISTISQFLCPNQAHLGVACCYVSNFSK 65
          +EEC  D+  T +   C N     V C ++  F K
Sbjct: 23 SEECKDDDALTSTLHTCANDPDFAVICAFLQKFGK 57


>AY102699-1|AAM27528.1|  403|Drosophila melanogaster SD09582p
           protein.
          Length = 403

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 18  EEDCIRQGGICVRTEECDPDNISTISQFLCPN 49
           E++ IR  G       C PDNI+TIS    PN
Sbjct: 327 EQETIRARGRHSIAFFCHPDNITTISPTDLPN 358


>AE014297-3173|AAF56013.2|  403|Drosophila melanogaster CG5346-PA
           protein.
          Length = 403

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 18  EEDCIRQGGICVRTEECDPDNISTISQFLCPN 49
           E++ IR  G       C PDNI+TIS    PN
Sbjct: 327 EQETIRARGRHSIAFFCHPDNITTISPTDLPN 358


>AE014297-1547|ABC66173.1|  202|Drosophila melanogaster CG34055-PA
          protein.
          Length = 202

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 3  VTVCSSPLLTQTPFSEEDC-IRQGGICVRTEE 33
          V  C++ L  +  FS +   IR+GGIC+  +E
Sbjct: 9  VRKCNNQLQAEHEFSNKSSLIRRGGICIFVDE 40


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.135    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,591,395
Number of Sequences: 52641
Number of extensions: 123873
Number of successful extensions: 153
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 141
Number of HSP's gapped (non-prelim): 12
length of query: 66
length of database: 24,830,863
effective HSP length: 46
effective length of query: 20
effective length of database: 22,409,377
effective search space: 448187540
effective search space used: 448187540
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)