Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000560-TA|BGIBMGA000560-PA|IPR000719|Protein kinase,
IPR002290|Serine/threonine protein kinase, IPR011009|Protein
kinase-like
         (593 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    88   2e-19
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                75   2e-15
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    74   4e-15
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    62   1e-11
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    62   1e-11
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    55   2e-09
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    53   6e-09
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    24   3.1  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 87.8 bits (208), Expect = 2e-19
 Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 15/146 (10%)

Query: 25  IGGSLLDVIKHKIRVSNCVNGVFDEATIATVLKEVLKGLEYFHSNGQIHRDVKAGNILLG 84
           +GG L  V++ K        G FD+ T       V++  +Y HS   I+RD+K  N+LL 
Sbjct: 449 LGGELWTVLRDK--------GHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLD 500

Query: 85  EDGTVQLADFGVSAWLATGRDMSRQKVRHTFVGTPCWMAPEVMEQDHGYDFKADIWSFGI 144
             G V+L DFG +  L  GR         TF GTP ++APEV+  + G+D  AD WS G+
Sbjct: 501 SQGYVKLVDFGFAKRLDHGRK------TWTFCGTPEYVAPEVI-LNKGHDISADYWSLGV 553

Query: 145 TAIEMATGTAPYHKYPPMKVLMLTLQ 170
              E+ TGT P+    PMK   + L+
Sbjct: 554 LMFELLTGTPPFTGGDPMKTYNIILK 579


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 74.5 bits (175), Expect = 2e-15
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 13/161 (8%)

Query: 55  VLKEVLKGLEYFHSNGQIHRDVKAGNILLGEDGTVQLADFGVSAWLATGRDMSRQKVRHT 114
           +LK +   L++ H+ G +H DVK  NIL+ ++G  +L DFG S  +    ++ +      
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDK------ 213

Query: 115 FVGTPCWMAPEVMEQDHGYDFKADIWSFGITAIEMATGTAPYHKYPPMKVLMLTLQNDPP 174
           F GTP + APEV++Q+      ADI+S GI A +M     P+       ++ L+ +   P
Sbjct: 214 FYGTPGYTAPEVIKQNRPTP-AADIYSLGIVAWQMLFRKLPFAGLHSHTIIYLSAKGHRP 272

Query: 175 NLDTGAEEKDQYKAYGKTFRKMIVDCLQKDPTKRPTATELL 215
            +D   +  D++K   KT  K +     ++ T+RPT  E++
Sbjct: 273 -IDDNID--DEFKGTYKTLYKQM---WSQNITERPTTNEVI 307


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 73.7 bits (173), Expect = 4e-15
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 15/176 (8%)

Query: 47  FDEATIATVLKEVLKGLEYFHSNGQIHRDVKAGNILL---GEDGTVQLADFGVSAWLATG 103
           + EA  +  ++++L+ + + H NG +HRD+K  N+LL    +   V+LADFG++  +   
Sbjct: 6   YSEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV--- 62

Query: 104 RDMSRQKVRHTFVGTPCWMAPEVMEQDHGYDFKADIWSFGITAIEMATGTAPYHKYPPMK 163
                 +    F GTP +++PEV++++  Y    DIW+ G+    +  G  P+      +
Sbjct: 63  --QGEAQAWFGFAGTPGYLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPFWDEDQHR 119

Query: 164 VLMLTLQNDPPNLDTGAEEKDQYKAYGKTFRKMIVDCLQKDPTKRPTATELLKHPF 219
              L  Q    + D  + E D      K    +I   L  +P+KR TA+E LKHP+
Sbjct: 120 ---LYAQIKTGSYDYPSPEWDTVTPEAK---NLINQMLTVNPSKRITASEALKHPW 169


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 62.1 bits (144), Expect = 1e-11
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 10/87 (11%)

Query: 58  EVLKGLEYFHSNGQIHRDVKAGNILLGEDGTVQLADFGVSAWLATGRDMSRQKVRHTFVG 117
           +VL+G+ Y HS G +HRDVK  N+LL  +   +L DFG          ++   +  + VG
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC--------ITEVMMLGSIVG 756

Query: 118 TPCWMAPEVMEQDHGYDFKADIWSFGI 144
           TP  MAPE++   H YD   D+++FGI
Sbjct: 757 TPVHMAPELL-SGH-YDSSVDVYAFGI 781


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 62.1 bits (144), Expect = 1e-11
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 10/87 (11%)

Query: 58  EVLKGLEYFHSNGQIHRDVKAGNILLGEDGTVQLADFGVSAWLATGRDMSRQKVRHTFVG 117
           +VL+G+ Y HS G +HRDVK  N+LL  +   +L DFG          ++   +  + VG
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC--------ITEVMMLGSIVG 794

Query: 118 TPCWMAPEVMEQDHGYDFKADIWSFGI 144
           TP  MAPE++   H YD   D+++FGI
Sbjct: 795 TPVHMAPELL-SGH-YDSSVDVYAFGI 819


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 54.8 bits (126), Expect = 2e-09
 Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 44  NGVFDEATIATVLKEVLKGLEYFHSNGQIHRDVKAGNILLGEDGTVQLADFGVSAWLATG 103
           +G F    +  +L+ +  G++Y      +HRD+ A N+L+      ++ADFG+S  + + 
Sbjct: 729 DGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESA 788

Query: 104 RDMSRQKVRHTFVGTPCWMAPEVMEQDHGYDFKADIWSFGITAIE-MATGTAPYHKYPPM 162
            +      R   +    W APE +     +   +D+WS GI   E M+ G  PY  +   
Sbjct: 789 TE-GAYTTRGGKIPVR-WTAPEAI-AFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQ 845

Query: 163 KVLMLTLQNDPPNLDTGAEEKDQYKAYGKTFRKMIVDCLQKDPTKRPTATEL 214
            V+         +++ G           +   ++++DC QK+ T RPT   L
Sbjct: 846 DVI--------KSIEKGYRLPAPMDC-PEAIYQLMLDCWQKERTHRPTFANL 888


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 53.2 bits (122), Expect = 6e-09
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 45  GVFDEATIATVLKEVLKGLEYFHSNGQIHRDVKAGNILLGEDGTVQLADFGVSAWLATGR 104
           G F E        E+  GL + H  G ++RD+K  N+LL +DG +++ADFG+        
Sbjct: 80  GKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCK-----E 134

Query: 105 DMSRQKVRHTFVGTP 119
            +S  K   TF GTP
Sbjct: 135 GISGDKTTKTFCGTP 149


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)

Query: 185 QYKAYGKTFRKMIVDCLQKDPTKRP 209
           +Y+ YGKT ++   D ++++ +K P
Sbjct: 277 EYRKYGKTSKERSRDRMERERSKEP 301


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.130    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,349
Number of Sequences: 429
Number of extensions: 4349
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 8
length of query: 593
length of database: 140,377
effective HSP length: 62
effective length of query: 531
effective length of database: 113,779
effective search space: 60416649
effective search space used: 60416649
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 46 (22.6 bits)