GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000560-TA|BGIBMGA000560-PA|IPR000719|Protein kinase,
IPR002290|Serine/threonine protein kinase, IPR011009|Protein
kinase-like
         (593 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    56   9e-10
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   7.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 55.6 bits (128), Expect = 9e-10
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 20/169 (11%)

Query: 52  IATVLKEVLKGLEYFHSNGQIHRDVKAGNILLGEDGTVQLADFGVSAWLATGRDMSRQKV 111
           + ++ ++V  G+E+      +HRD+ A N+L+ E+ TV+++DFG+S      RD+ +  V
Sbjct: 594 LLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLS------RDVYQDNV 647

Query: 112 RHTFVGTPC---WMAPEVMEQDHGYDFKADIWSFGITAIEMAT-GTAPYHKYPPMKVLML 167
                G      WMA E +     Y   +D+WSFG+   E+ T G  PY      ++L  
Sbjct: 648 YCKNGGGKLPVRWMALESLTHQR-YTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDF 706

Query: 168 TLQNDPPNLDTGAEEKDQYKAYGKTFRKMIVDCLQKDPTKRPTATELLK 216
            L++            D Y         ++++C ++ P  RPT TEL K
Sbjct: 707 -LKSGNRLARPANCSPDLY--------AVMLNCWKECPKNRPTFTELSK 746


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 190 GKTFRKMIVDCLQKDPTK-----RPTATELLKHPFFKKAKDRKYLTQ 231
           G+  +K + D L    TK     + TA ++++H   K+A+D + L++
Sbjct: 59  GRELKKTLPDALSSGCTKCNQKQKETAEKVIRHLTQKRARDWERLSK 105


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.130    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,625
Number of Sequences: 317
Number of extensions: 3398
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 593
length of database: 114,650
effective HSP length: 61
effective length of query: 532
effective length of database: 95,313
effective search space: 50706516
effective search space used: 50706516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 46 (22.6 bits)