GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000559-TA|BGIBMGA000559-PA|IPR000652|Triosephosphate
isomerase
         (174 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   1.3  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    25   1.7  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    23   3.9  
AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical prote...    23   3.9  
AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory a...    23   3.9  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   6.9  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   6.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   6.9  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   9.1  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 145 ELASCKDIDGFLVGGASLKPEFVEIV 170
           +L +CK + G L G    KPE+V  V
Sbjct: 699 DLRTCKTLKGTLTGADCDKPEYVSDV 724


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 79  IGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSAN 121
           IG    ++   Y P+   G GK    ++ QD    L ++LSA+
Sbjct: 108 IGTLMRSVTTYYHPILMGGEGKLEDFKKVQDAVGVLDSFLSAS 150


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 63  KTEEVVFRQLKALVSAIGDKWENIVLAYEPV 93
           K    VF +L  L++  G+ W+ +     PV
Sbjct: 130 KVRPEVFGELSGLITTQGETWQQLRTIVNPV 160


>AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical protein
           protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)

Query: 58  ERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEP 92
           E++   TE+V+      L+    D+WEN+   Y+P
Sbjct: 77  EKQKSGTEKVI----NYLIDNRKDQWENLQKKYDP 107


>AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory
           appendage protein SAP-3 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)

Query: 58  ERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEP 92
           E++   TE+V+      L+    D+WEN+   Y+P
Sbjct: 77  EKQKSGTEKVI----NYLIDNRKDQWENLQKKYDP 107


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)

Query: 92  PVWAIGTGKTATPQQAQDVHHAL 114
           P  AI  G+  TP      HHAL
Sbjct: 43  PGGAIVVGRAETPDHLASQHHAL 65


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 68  VFRQLKALVSAIGDKWENIVLAYEPV 93
           +F +   LV+  G+KW+ +     PV
Sbjct: 138 IFSETGGLVTEHGEKWQKVRTIVNPV 163


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 12   KMNGDKNQINEIVNNLKKGPLDPNVEVAHALESGLKVIACIGETLEERES-GKTEEVVFR 70
            K N ++ Q+ E  N L++   +  + +  A E    +   I   L++RE+ GK + + F 
Sbjct: 953  KGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEI-VALQKREAEGKMKRLEFE 1011

Query: 71   QL 72
            Q+
Sbjct: 1012 QI 1013


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 6   VVGGNWKMNGDKNQINEIVNNLKK 29
           V+ G W  +G ++ INEI    +K
Sbjct: 171 VLFGRWVADGKRDMINEISLKTRK 194


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.131    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,525
Number of Sequences: 2123
Number of extensions: 6585
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 9
length of query: 174
length of database: 516,269
effective HSP length: 60
effective length of query: 114
effective length of database: 388,889
effective search space: 44333346
effective search space used: 44333346
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)