Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000558-TA|BGIBMGA000558-PA|undefined
(751 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 38 0.004
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.19
SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase P... 32 0.25
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.44
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 31 0.59
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.59
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 31 0.77
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 31 0.77
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 30 1.0
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 30 1.0
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 30 1.0
SPCC4G3.07c |phf1|swp1, saf50|PHD finger containing protein Phf1... 30 1.4
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 30 1.4
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 29 1.8
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 29 2.4
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 29 2.4
SPAC3A12.11c |cwf2|prp3|RNA-binding protein Cwf2|Schizosaccharom... 29 2.4
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 29 2.4
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 29 3.1
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 28 4.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 4.1
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 28 4.1
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 28 4.1
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 28 5.5
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 28 5.5
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 27 7.2
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 27 7.2
SPMIT.08 |||mitochondrial ribosomal small subunit|Schizosaccharo... 27 7.2
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 27 7.2
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 27 9.5
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 27 9.5
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 9.5
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 27 9.5
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 27 9.5
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 38.3 bits (85), Expect = 0.004
Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 12/247 (4%)
Query: 502 NSFTSNYAFDTSASSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDH 561
+S S+ + +S+SSS + +S + P T S+ S+S+ + S S ++
Sbjct: 213 SSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSS--- 269
Query: 562 WDDTDIASFPNEQSPSGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSH 621
+S + SP+ + + + T TI SS S +S + S
Sbjct: 270 -SSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSS 328
Query: 622 NLSVPQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQYQEAKAR 681
+ S + + + + S+++P S ++T K TV+ S
Sbjct: 329 SSSFSSSPTSSSSTISS--SSSSPSSSSFSST-TSSSKSSSSFSSTVSSSSSTSSSTLTS 385
Query: 682 QRSSNKEDNSNVSHNS--RPRKRIRALKLNTLPEEN---NKEKTNVGTIRSKSNKLSYLL 736
SS+ S+ SH+S K + K ++ P + + ++ + S S+ LS L
Sbjct: 386 SSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLS 445
Query: 737 ESPATTS 743
P T+
Sbjct: 446 SKPILTA 452
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 32.7 bits (71), Expect = 0.19
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 506 SNYAFDTSASSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDDT 565
S + + S SSS+ SE ++ + S+ + S+ + S S +++ + D T
Sbjct: 245 SESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSS--DSESESSSEDSDST 302
Query: 566 DIASFPNEQSPSGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLSV 625
+S + S S +GN N + T G V+ T SS + D +H +L
Sbjct: 303 SSSSDSDSSSSSEDGNSNTDTTTS-GEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKR 361
Query: 626 PQASNDNFQYVEAPVSTTTPY 646
+++ ++ +T TP+
Sbjct: 362 KHEDDESSTSTKSSRTTKTPF 382
>SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase
Ppk21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 32.3 bits (70), Expect = 0.25
Identities = 55/211 (26%), Positives = 82/211 (38%), Gaps = 26/211 (12%)
Query: 65 APAYMPSAKGAVAVPTNIALPAVASIVPLNSVEIYEESPTRTPGTSVTASKLLPLYRARG 124
APAY S A A A A ASIV +E PT T+ TA R+
Sbjct: 344 APAYYRSNVTAAAAANAAAAFASASIVKHQETARRQELPTVNRFTAPTAHYGYASLRSH- 402
Query: 125 YYGPTPTDWEDQEYDLVAPHEA---SDSSYLPTAFAEPPG---PSIVPHNHAPKKVKVVK 178
P D Y LV E+ S S ++ + P G PS + +K +V+
Sbjct: 403 ---QMPVD--RLYYKLVPSSESIIESTSVFVSPIPSVPEGNKFPSGLSKMFLKRKQRVML 457
Query: 179 INETPRKKIVRKNKPKRLIVRGRPQLEEEHPVSVFHE------------QFYSELDGSGT 226
+ + R V K K +RL + L++ V +F E Q + D SG
Sbjct: 458 LTDVGRCAFVCKGKHERLFIEMEVNLKDSSVVVIFDENSSKRFLIEDKVQSWIIEDSSGD 517
Query: 227 IRKIKKPPRVEKIIDGDTEHIHTYNEEHIHK 257
+ K K ++ K D + H +EE++ +
Sbjct: 518 VTKYK--DKILKFADVASSHQSRSSEENVEE 546
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 31.5 bits (68), Expect = 0.44
Identities = 43/228 (18%), Positives = 89/228 (39%), Gaps = 16/228 (7%)
Query: 505 TSNYAFDTSASSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDD 564
+S+ A TS SSS+++ S ++ + + +A S + SF + +
Sbjct: 26 SSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFI----- 80
Query: 565 TDIASFPNEQSPSGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLS 624
T + S ++QS S + + + L + + T SS S S + S +S
Sbjct: 81 TSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMS 140
Query: 625 VPQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEKKDVETV-----DTVAFEQSQYQEAK 679
S+ + P S+++ + S + T+ + V + + + Y
Sbjct: 141 SSSLSHSS----SVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEV 196
Query: 680 ARQRSSNKEDNSNVSHNSRPRKRIRAL--KLNTLPEENNKEKTNVGTI 725
++N ++S+ +S I + TLP ++NK +VG +
Sbjct: 197 VTPTTTNNWNSSSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVV 244
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 31.1 bits (67), Expect = 0.59
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 626 PQASNDNFQY--VEAPVSTTTPYFSLLATTAVPPE-KKDVETVDTVAFEQ-SQYQEAKAR 681
P +N+ F V P++ L T+ + E + + T+++ F+ SQY A
Sbjct: 105 PSKANNLFDKLGVSKPITFIACILQLGGTSFMESELQTKLSTINSSPFKSLSQYWNA--- 161
Query: 682 QRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIRS--KSNKLSYLLESP 739
+ NK+++ + S NS + + A K T PE+ N E +++ + S K+ K L P
Sbjct: 162 --AYNKKESISSSTNSNIKLHLAARKYQTKPEKFN-ENSSISQVTSAIKATKAFSHLTQP 218
Query: 740 --ATTSKLNYGDK 750
A + N GDK
Sbjct: 219 KRALLKESNTGDK 231
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 0.59
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 16/160 (10%)
Query: 470 SVSSTVIHNYKPKTLTGQGFQKFANPLLNFKDNSFTSNYAFDTSASSSNIVTSEDKNINA 529
S SST + + T T + PL + S TS A T +S+N TS + A
Sbjct: 353 SASSTPLTSVNSTTATSAS----STPLTSVNSTSATS--ASSTPLTSANSTTSTSVSSTA 406
Query: 530 PRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDDTDIASFPNEQSPSGNGNYNFEQTQP 589
P ++ S+S+ +S S + TT T ++S + + S + + P
Sbjct: 407 PSYNTSSVLPTSSVSSTPLS---SANSTTATSASSTPLSSVNSTTATSAS-------STP 456
Query: 590 LGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLSVPQAS 629
L +V T S+P+ S S A A + SV S
Sbjct: 457 LSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTS 496
Score = 28.3 bits (60), Expect = 4.1
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 20/195 (10%)
Query: 493 ANPLLNFKDNSFTSNYAFDTSASSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGG 552
A P + +S +S A +++ SSS +S + +A T S+ S S + S
Sbjct: 170 ATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLAS 229
Query: 553 SG-HQTTVDHWDDTDIASFPNEQSPSGNGNYNFEQTQPLGTVTP--------MPFTIKES 603
S + TT + I+S + +P + N T T + +P + S
Sbjct: 230 SSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSS 289
Query: 604 SPMHSYYSDMARKA----LHSHN-------LSVPQASNDNFQYVEAPVSTTTPYFSLLAT 652
+P+ S S A A L S N S P +S + A +++TP S+ +T
Sbjct: 290 TPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNST 349
Query: 653 TAVPPEKKDVETVDT 667
TA + +V++
Sbjct: 350 TATSASSTPLTSVNS 364
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 30.7 bits (66), Expect = 0.77
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 657 PEKKDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENN 716
P ++D+ V+TV+ ++ +E+++ S+++ED +S P K+ + K T E
Sbjct: 141 PTEEDL--VETVSGDEESEEESESEDNSASEEDEL----DSAPAKKAQVKKKRTKDESEQ 194
Query: 717 KEKTNVGTIRSKSNKLSYLLESPATTSKLNYGDKI 751
+E + +K K+ +P K+ + +K+
Sbjct: 195 EEAASPKKNNTKKQKVE---GTPVKEKKVAFAEKL 226
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 566 DIASFPNEQSPSGNGNYNFEQTQPLGTVTPM-PFTIKESSPMHSYYSDMARKAL 618
DIA FP E P + + + T L V M PF+ SP + Y M ++ +
Sbjct: 711 DIACFPKEIVPKVSTHVEYSPTNVLSIVANMTPFSDFNQSPRNMYQCQMGKQTM 764
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1379
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 498 NFKDNSFTSNYAFDTSASSSNIVTSEDKNINAP 530
+ ++ S++S+ A D S S++ +V ++DK I+AP
Sbjct: 977 SIEETSYSSSKAHDASLSAATLVANKDKLIHAP 1009
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 30.3 bits (65), Expect = 1.0
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 55 YITNHPSSQYAPAYMPSAKGAVAVPTNIALPAVASIVPLNSVEIYEESPTRTPGTSVTAS 114
Y + P +PAYMPS+ PT+ P+ + P S SPT +P S T+
Sbjct: 1558 YSPSSPGYSTSPAYMPSSPS--YSPTS---PSYSPTSPSYSPTSPSYSPT-SPSYSATSP 1611
Query: 115 KLLPLYRARGYYGPTPTDWE--DQEYDLVAP-HEASDSSYLPTAFA-EPPGPSIVP 166
P + Y PT + Y +P + + SY PT+ + P PS P
Sbjct: 1612 SYSPTSPS---YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1664
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 363 RNGGVNNRIKNKYMRKYGKPTTTPFPDLSYENMYSSVNKIKKLKFRPTSQFDTSSENVQN 422
R G ++KN R P P PD S+ S + P S S N+QN
Sbjct: 474 RGGPRTAKLKNDLRRIQSSPIVAPTPDTSFREPLSEIGSNDSWLVLPNS----LSANIQN 529
Query: 423 DFRPIPDFNFKNK 435
D DF +K
Sbjct: 530 DVLRKTDFMCTDK 542
>SPCC4G3.07c |phf1|swp1, saf50|PHD finger containing protein
Phf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 634 QYVEAPVS-TTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQYQEAK-ARQRSSNKEDNS 691
Q+V+ P T P S T+VPPE+ +V +S + K R RSS +ED++
Sbjct: 74 QHVQTPYGGMTMPASSSSGATSVPPEQDPSLSVSFNRLPKSASTKTKNGRIRSSRREDDN 133
Query: 692 NV 693
+
Sbjct: 134 RI 135
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 625 VPQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQYQEAKARQRS 684
+PQ SN++ + +E PV +TT L T + V V +++ Y E ++ S
Sbjct: 83 IPQQSNES-EAIEKPVQSTTEVE--LKTNELAESNSSV----AVEGDENSYAETPKKKHS 135
Query: 685 SNKEDNSNVSHNSRPRKRIRALKLNTLPE 713
++ + +S +K ++ KLNTL +
Sbjct: 136 LIRKRRKSPLDSSSAQKVLKKNKLNTLEQ 164
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Query: 575 SPSGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLSVPQASNDNFQ 634
SP NG Y P + P ++ + SY +R + S S P+++ +
Sbjct: 166 SPYNNG-YPIGAVNPTSAIPAQPPAQPVNNVLPSYVRSNSRSSARSTARSAPRSTQRSRS 224
Query: 635 YVEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVAFEQS 673
PV+T +LL A P E V T A +S
Sbjct: 225 SSANPVTTPPVNNTLLTPPAPPVELPPVTTTSPNAIIRS 263
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 469 FSVSSTVIHNYKPKTLTGQGFQKFANPLLNFKDNSFTSNYAFDTSASSSNIVTSEDKNIN 528
+S+S ++I+ + L F+KF N +L F ++ + F T+ SSN TS + ++
Sbjct: 421 YSLSFSIINIFWSTALKSYIFEKFTNTILGFWLSTQHHKHPFLTTIGSSN-YTSRSQQLD 479
Query: 529 APRT 532
T
Sbjct: 480 LEST 483
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 29.1 bits (62), Expect = 2.4
Identities = 49/211 (23%), Positives = 78/211 (36%), Gaps = 10/211 (4%)
Query: 487 QGFQKFANPLLNFKDNSFTSNYAFDTSASSSNIVTSEDKNINAPRTFSAKRGKKK---SI 543
Q + AN N K++ F + ++++ N + T +AKR +K SI
Sbjct: 123 QPASRIANRKNNEKEDEFMAEILGSIDQDIPERLSTKKGN-RSHTTSNAKRRSQKAASSI 181
Query: 544 STQNI-SFGGSGHQTTVDHWDDTDIASFPNEQSPSG--NGNYNFEQTQPLGTVTPMPFTI 600
ST N+ S + +S P SP N + +QP+ P +
Sbjct: 182 STTNVVSSDPKKYIPETVPSTPQPASSLPIPSSPPAALETEENVD-SQPMELDEP-ELPV 239
Query: 601 KESSPMHSYYSDMARKALHSHNLSVPQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEKK 660
+P+ +A K L SH+ AS + P+S TP S L +A
Sbjct: 240 GSDAPIIDVEESIAMKPLMSHDQVDDTASLSKATISQQPLSPMTPLSSELDVSAFSEINS 299
Query: 661 DVETVDTVAFEQSQYQEAKARQRSSNKEDNS 691
++ VD A S +K +ED S
Sbjct: 300 KIKNVDVPASSYSS-PISKVSPSDVTEEDGS 329
>SPAC3A12.11c |cwf2|prp3|RNA-binding protein
Cwf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 175 KVVKINETPRK-KIV-RKNKPKRLIVRGRP--QLEEEHPVSVFHEQFYSELDG 223
K + ETPRK KIV RK +P R + RP ++E E P V++ +Y++ G
Sbjct: 29 KSKEYEETPRKVKIVKRKKQPARKQIETRPEYEMEPEQPGQVYN-LWYNKWSG 80
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 58 NHPSSQYAPAYMPSAKGAVAVPTNIALPAV-ASIVPLNSVEIYEESPTRTPGTSVTASKL 116
N PSSQ P+ PS + A+ A + + + P + +++ +L
Sbjct: 205 NSPSSQQFPSTYPSRSQNPLSSSGDGSTAIHAGPIQHQNSNAFSNYPYPLDASHLSSQQL 264
Query: 117 LPLYRARGYYGPTPTDWEDQE 137
L +YR + +G TP+ + + E
Sbjct: 265 LSMYRDQVSHGVTPSTFRNHE 285
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/76 (22%), Positives = 33/76 (43%)
Query: 657 PEKKDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENN 716
PE++ V+TV+ +A E+ + ++ + S S ++ S + R K E+
Sbjct: 243 PEEETVDTVEEIADEEKHSVKEESGEASPQSSQQSTITSISTTTRSTRKAKREAAAEDKA 302
Query: 717 KEKTNVGTIRSKSNKL 732
V SK+ K+
Sbjct: 303 DLPAAVAPKPSKTRKV 318
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 28.3 bits (60), Expect = 4.1
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 108 GTSVTASKLLPLYRARGYYGPTPTDWEDQEYDLVAPHEASDSSYLPTAFAEPPGPSIVPH 167
G+S TAS++ + + T E+ L+ + L A P P P+
Sbjct: 571 GSSSTASRIDKIIYSYKRNKNTEVQQRSVEFHLILNDSKLSKTILEPTPAPLPPPRTTPY 630
Query: 168 NHAPKKVKVVKINETPRKKIVRKNKPKRLIVRGRPQLEE--EHPVSVFHEQFYSELDGSG 225
+A +K+K N+ K++ N+ LI P + E E PV + S L +
Sbjct: 631 QNAEQKLKA---NKHVEKRVQESNELLDLIGLTTPSVAEPLETPVDEMTQSPQSSLSRAP 687
Query: 226 TIRK 229
+ K
Sbjct: 688 STSK 691
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.3 bits (60), Expect = 4.1
Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 6/174 (3%)
Query: 502 NSFTS-NYAFDTSASSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVD 560
+SFTS N ++ T+ ++SN + TF++ + S S S T
Sbjct: 418 SSFTSSNSSYTTTLTASNTTVTFTGTGTGSATFTSSPPFYSNSSVIPTSAPSSVSSFTSS 477
Query: 561 HWDDTDIASFPNEQ---SPSGNGNYNFEQTQPLGTVTPM--PFTIKESSPMHSYYSDMAR 615
+ T + N + +G G+ + P + + + P T+ S + S+ S +
Sbjct: 478 NSSYTTTLTASNTTVTFTGTGTGSATATSSSPYYSNSSIIVPTTVSTSGSVSSFSSSPSP 537
Query: 616 KALHSHNLSVPQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVA 669
+ S ++ +SN+ TT+P + T + ET+ TV+
Sbjct: 538 TSSFSGTSALSSSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETISTVS 591
>SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1163
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 517 SNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDDTDIASFPNEQSP 576
+NI ++++NI R + KR K S Q S ++ V DD F N++
Sbjct: 957 TNIRKTQERNI---RKRAMKRDPAKPSSAQPRKTFASAYEAAVYDTDDEAEEEFENDEMN 1013
Query: 577 SGNG 580
+GNG
Sbjct: 1014 NGNG 1017
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 28.3 bits (60), Expect = 4.1
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 586 QTQPLGTVTPMPFTIKESSPMHSYYSDMARKA--LHSHNLSV---PQASNDNFQYVEAPV 640
Q P + P F SP + D+ R+A LHS ++V PQ S A
Sbjct: 228 QEHPKPSFHPSQFE-SSFSPRVQFDHDVERRASELHSRPVTVFQEPQRSASQPYESHALS 286
Query: 641 STTTPYFSLLATTAVPPEKKDVETVDTVAF 670
P F T +P ++DV TV + F
Sbjct: 287 PKVAPLFDNSQATPIPKRQQDVVTVANLQF 316
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 27.9 bits (59), Expect = 5.5
Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 11/112 (9%)
Query: 511 DTSASSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDDTDI--- 567
DT+ + +E I P T A G K S S G GH T D D D
Sbjct: 1652 DTNLDAKRAEEAEMIMIETPPTAEANTGAKLDRSLSLGSRRGPGHTTEDDASDGLDTIQE 1711
Query: 568 ASFPNEQSPSGNGN---YNFEQTQPLGTVTPMPFTIK----ESSPMHSYYSD 612
S S SG + Y E+ P + +P ++ E P SYY D
Sbjct: 1712 ESMTAGDSTSGGSDISRYRAERLNP-DSHSPSEYSFDSGDYEFDPQRSYYYD 1762
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 215 EQFYSELDGSGTIRKIKKPPRVEKIIDGDTEHIHTYNEEHIHKLVLDDDAKISGIHSAGG 274
++ +S LDG+ T+ +KK R +K G T+ + T + ++ + DA+ S ++
Sbjct: 497 DKTFSSLDGNPTLELVKKKVRDKK---GSTQQLPTSSPQNSVYGSIKKDAQSSTYNATDI 553
Query: 275 VSSLPVQHSLIPLRSSQPI 293
+SS Q L+ R QP+
Sbjct: 554 MSSNTYQEFLVWKR--QPV 570
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 671 EQSQYQEA--KARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIRSK 728
+Q Y E K S NK ++N+S + + K + + + + EK +V S
Sbjct: 105 KQKGYDEEMYKVNPASRNKSQSNNISSHEKSSKTTKNVSPGVMTSDLIPEKKSVKHNNSS 164
Query: 729 SNKLSYLLE 737
SN++ L +
Sbjct: 165 SNRIEGLAD 173
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 685 SNKED---NSNVSHNSRPRKRIRA---LKLNTLPEENNKEKTNVGTIRSKSNKLSYLLES 738
SNKE NS +S P+ + + LK++T P E K + N G R SN+ S+ LE+
Sbjct: 92 SNKEPLKINSWKKSSSHPKSKEVSNGLLKVSTPPTEFVKRE-NAGIRRRSSNQGSFALEA 150
Query: 739 P 739
P
Sbjct: 151 P 151
>SPMIT.08 |||mitochondrial ribosomal small
subunit|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 227
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 573 EQSPS---GNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLSVPQAS 629
E+ PS GN N NF+ + P + ++ P S S++ +KAL +H L +
Sbjct: 35 EKRPSILIGNININFKSDSLIEVSFPYYPLLNKNYPNPSIISNIIQKALSNHLLY--SSK 92
Query: 630 NDNFQYVEAPVSTTTPYFSLL 650
N +F + +TPY S L
Sbjct: 93 NYSFIVNIRALPISTPYGSSL 113
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 27.5 bits (58), Expect = 7.2
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 648 SLLATTAVPPEKKDVETVDTVAFEQS---QYQEAKARQRSSNKEDN--SNVSHN-SRPRK 701
S L+ T +P EK + ET FE S Q+ + +N E N S+V + S P+
Sbjct: 1298 SSLSQTEIPEEKTENETTAVNGFENSKKRQFSSLLSGSIDTNNESNKVSSVEFDKSGPQD 1357
Query: 702 RIRALKLNTLPEENNKEKTNVGTIRSKSNKLSYL 735
I+++ T E N + ++ S+ L L
Sbjct: 1358 IIQSMTEATFEIEKNIQDLKSEEVQKLSDLLMRL 1391
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 433 KNKRIKKTKNLVPAFDFNIDKHVNDYGTSQTGIQDPFSVSSTVIHNYKPKTLTGQGFQKF 492
KNK+ K K ++P +F++D ++ D S IQ PF T N+ G +
Sbjct: 52 KNKKPLKPKIIIPDKEFDLDYYLKDETES---IQSPFE-GFTAQPNFSNFNKQGNTMNRE 107
Query: 493 AN 494
AN
Sbjct: 108 AN 109
>SPBC56F2.11 |met6||homoserine
O-acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 489
Score = 27.1 bits (57), Expect = 9.5
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 351 TPLRISHAHEDIRNGGVNNRIKNKYMRKYGKPTTTPFPDLSYENMYSSVNKIKKLKFRPT 410
TPL S+AH + N G NR + + R G ++P + + + SSV+ + L T
Sbjct: 266 TPLTPSNAHWVVHNEGNRNR-RERPCRSNG---SSPTSESALNSPASSVSSLPSLGASQT 321
Query: 411 SQFDTSSENVQNDFRPIPD--FNFKNKRIKKTKNLVPAFDFN 450
+ D+SS N + R + F+ ++ + K V FD N
Sbjct: 322 T--DSSSLNQSSLLRRPANTYFSAQSYLRYQAKKFVSRFDAN 361
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 684 SSNKEDNSNV-SHNSRPRKRIRALKLNTLPEENNKEKTNVGTIRSKS 729
SS KE++SN S ++P K+ + P E+ TN ++ + S
Sbjct: 27 SSTKEESSNTPSTETQPEKKAEEPEAAAEPSESTSTPTNASSVATPS 73
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 654 AVPPEKKDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPE 713
A PP K D+E F + +E K R++ + K++ + ++R++A PE
Sbjct: 265 AQPPSKLDLEIESGEYFLK---KEEKERKKRAEKKEQQKEKKKEKEKERMKAF---IPPE 318
Query: 714 ENNKEK 719
E++K++
Sbjct: 319 ESSKKR 324
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 678 AKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIRSKSNKLSYLLE 737
+ A + E S + SR + ++ +K N L + K N+ + R+K K L
Sbjct: 77 SNADDANKEPEKQSTSDYVSRKNRHMQLIKKNILEHDLQARKANLESYRAKLEKEYKTLA 136
Query: 738 SPATTSKLNYGDK 750
+L+ G K
Sbjct: 137 ENKIQQRLSDGTK 149
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,785,387
Number of Sequences: 5004
Number of extensions: 180255
Number of successful extensions: 530
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 514
Number of HSP's gapped (non-prelim): 46
length of query: 751
length of database: 2,362,478
effective HSP length: 78
effective length of query: 673
effective length of database: 1,972,166
effective search space: 1327267718
effective search space used: 1327267718
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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