Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000558-TA|BGIBMGA000558-PA|undefined
(751 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 36 0.13
At1g52420.1 68414.m05917 glycosyl transferase family 1 protein c... 34 0.30
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containi... 34 0.30
At5g27950.1 68418.m03366 kinesin motor protein-related kinesin h... 34 0.40
At2g35670.1 68415.m04375 transcription factor, putative / fertil... 34 0.40
At2g22795.1 68415.m02704 expressed protein 33 0.69
At4g16280.3 68417.m02471 flowering time control protein / FCA ga... 33 0.92
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 33 0.92
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 33 0.92
At3g08020.1 68416.m00979 PHD finger protein-related contains low... 32 1.2
At3g02090.2 68416.m00175 mitochondrial processing peptidase beta... 32 1.6
At3g02090.1 68416.m00174 mitochondrial processing peptidase beta... 32 1.6
At2g35530.1 68415.m04352 bZIP transcription factor family protei... 32 1.6
At4g36490.1 68417.m05181 SEC14 cytosolic factor, putative / phos... 31 2.1
At3g28770.1 68416.m03591 expressed protein 31 2.1
At5g27970.1 68418.m03369 expressed protein 31 2.8
At4g00870.1 68417.m00118 basic helix-loop-helix (bHLH) family pr... 31 2.8
At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing ... 31 2.8
At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing ... 31 2.8
At1g72080.1 68414.m08332 hypothetical protein 31 2.8
At3g48770.1 68416.m05326 hypothetical protein 31 3.7
At5g58480.1 68418.m07324 glycosyl hydrolase family 17 protein si... 30 4.9
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 30 4.9
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 30 4.9
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 30 4.9
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 30 4.9
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 30 4.9
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 30 4.9
At3g11964.1 68416.m01479 S1 RNA-binding domain-containing protei... 30 4.9
At3g10650.1 68416.m01281 expressed protein 30 6.5
At2g42300.1 68415.m05236 basic helix-loop-helix (bHLH) family pr... 30 6.5
At1g35110.1 68414.m04352 Ulp1 protease family protein similar to... 30 6.5
At5g41020.1 68418.m04986 myb family transcription factor contain... 29 8.6
At4g14310.2 68417.m02205 peroxisomal membrane protein-related co... 29 8.6
At4g14310.1 68417.m02204 peroxisomal membrane protein-related co... 29 8.6
At3g58740.1 68416.m06547 citrate synthase, glyoxysomal, putative... 29 8.6
At3g22380.1 68416.m02825 expressed protein 29 8.6
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 29 8.6
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 29 8.6
At1g23760.1 68414.m02998 BURP domain-containing protein / polyga... 29 8.6
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 35.5 bits (78), Expect = 0.13
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 658 EKKDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENNK 717
E+KD E+V+ + + + + S N++ +SN + +P+K+ R L N N +
Sbjct: 1490 EQKDPESVNRLD-PGKEKESIPSNLVSGNEQPDSNTAPAKKPKKKKRKLANNFDSVNNME 1548
Query: 718 EKTNVGTIRSKSNKLSYLLESPATTS 743
EK + S+ NK + E P+ S
Sbjct: 1549 EKMPSTNVLSQGNKSGLIEEKPSIPS 1574
>At1g52420.1 68414.m05917 glycosyl transferase family 1 protein
contains Pfam profile: PF00534 Glycosyl transferases
group 1
Length = 670
Score = 34.3 bits (75), Expect = 0.30
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 636 VEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQY-QEAKARQRSSNKEDNSNVS 694
V + T +++ +++ P K + ++++A S+ QE++ + +++ ++S
Sbjct: 424 VRTELGITDSDMLVMSLSSINPTKGQLLLLESIALALSERGQESQRNHKGIIRKEKVSLS 483
Query: 695 HNSRPRKRIRALKL------NTLPEENNKEKTNVGTIRSKSNKLSYLLE 737
R R R +K N L E + K +G++ SKSNK+ Y+ E
Sbjct: 484 SKHRLRGSSRQMKSVSLTLDNGLRREKQELKVLLGSVGSKSNKVGYVKE 532
>At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P46825 Kinesin light chain
(KLC) {Loligo pealeii}; contains Pfam profile PF00515:
TPR Domain
Length = 1797
Score = 34.3 bits (75), Expect = 0.30
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 8/145 (5%)
Query: 176 VVKINETPRKKIVRKNKPKRLIVRGRPQLEEEHPVS--VFHEQFYSELDGSGTIRKIKKP 233
+ + E +K+I P+ I +G +++ E S V +E D SG ++++
Sbjct: 1451 ITGLEEEVKKEI--SADPESNITQGEEEIKVELQPSEGVLGGSHINENDESGGGIQVEEQ 1508
Query: 234 PRVEKIIDGDTEHIHTYNEEHIHKLVLDDDAKISGIHSAGGVSSLPVQHSLIPLR----S 289
VE I DG T+ IH+ E+ + + D + S S L+P + S
Sbjct: 1509 VEVELINDGVTDMIHSTREQQVIDQLAADSEDLKAKLSISTTDSGDASRGLLPNKKLSAS 1568
Query: 290 SQPILTFSPDTLTGYTAIGSMGTPS 314
+ P SP ++ T IG PS
Sbjct: 1569 AAPFNPSSPPSIIRPTPIGMNIGPS 1593
>At5g27950.1 68418.m03366 kinesin motor protein-related kinesin
heavy chain-like protein, potato, PIR:T07397
Length = 625
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 450 NIDKHVNDYGTSQT-GIQDPFSVSSTVIHNYKPKTLTGQGFQKFANPLLNFKDNSFTSNY 508
++ K++ + TSQ+ + D S + KP P + KDNS
Sbjct: 532 SVAKNLTQFSTSQSLSLSDSRSKALLRRSYTKPLQAAANSGTPPETPKRHIKDNSLQRKN 591
Query: 509 AFDTSASSSNIVTSEDKNINA 529
DTS+ S +VTS D N+ A
Sbjct: 592 MNDTSSPRSKMVTSSDPNVRA 612
>At2g35670.1 68415.m04375 transcription factor, putative /
fertilization-independent seed 2 protein (FIS2)
identical to GB:AF096095
Length = 632
Score = 33.9 bits (74), Expect = 0.40
Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 18/262 (6%)
Query: 450 NIDKHVNDYGTSQTGIQDPFSVSSTVIHNYKPKTLTGQGFQKFANPLL-NFKDNSFTSNY 508
N HVND S P + SS I + T T + + P + + D + +S
Sbjct: 118 NDSTHVNDDNVSSP----PRAHSSEKISDIL--TTTQLAIAESSEPKVPHVNDGNVSSPP 171
Query: 509 AFDTSA--SSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVD---HWD 563
+SA + S V +D + PR S ++ + ++ NIS H + + H +
Sbjct: 172 RAHSSAEKNESTHVNDDDDVSSPPRAHSLEKNESTHVNEDNISSPPKAHSSKKNESTHMN 231
Query: 564 DTDIASFPNEQSPSGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSD--MARKALHS- 620
D D+ SFP S + TQP V P ++ S Y+ AR+ +
Sbjct: 232 DEDV-SFPPRTRSSKETSDILTTTQP-AIVEPSEPKVRRVSRRKQLYAKRYKARETQPAI 289
Query: 621 HNLSVPQASNDNFQYVEAPVST-TTPYFSLLATTAVPPEKKDVETVDTVAFEQSQYQEAK 679
S P+ + N + V +P + S + TT P + E +++ +
Sbjct: 290 AESSEPKVLHVNDENVSSPPEAHSLEKASDILTTTQPAIAESSEPKVPHVNDENVSSTPR 349
Query: 680 ARQRSSNKEDNSNVSHNSRPRK 701
A NK NV + P K
Sbjct: 350 AHSSKKNKSTRKNVDNVPSPPK 371
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 33.1 bits (72), Expect = 0.69
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 658 EKKDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENNK 717
E KD E E S +E+K + + +++ S+ ++ ++ + K + P+E K
Sbjct: 538 ETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETK 597
Query: 718 EKTN 721
EK N
Sbjct: 598 EKEN 601
>At4g16280.3 68417.m02471 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 533
Score = 32.7 bits (71), Expect = 0.92
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 568 ASFPNEQSPSGNGNYNFEQTQPLGTV-TPMPFTIKESSPMHSYYSDMARKALHS-HNLSV 625
A+ P+ Q G Y PL T+++ + + +K LHS L +
Sbjct: 368 ATLPSNQG-GPLGGYGVPPLNPLPVPGVSSSATLQQQNRAAGQHITPLKKPLHSPQGLPL 426
Query: 626 PQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEK 659
P NF +AP+ Y S L T+ +PP++
Sbjct: 427 PLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQ 460
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 32.7 bits (71), Expect = 0.92
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 568 ASFPNEQSPSGNGNYNFEQTQPLGTV-TPMPFTIKESSPMHSYYSDMARKALHS-HNLSV 625
A+ P+ Q G Y PL T+++ + + +K LHS L +
Sbjct: 368 ATLPSNQG-GPLGGYGVPPLNPLPVPGVSSSATLQQQNRAAGQHITPLKKPLHSPQGLPL 426
Query: 626 PQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEK 659
P NF +AP+ Y S L T+ +PP++
Sbjct: 427 PLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQ 460
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 32.7 bits (71), Expect = 0.92
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 568 ASFPNEQSPSGNGNYNFEQTQPLGTV-TPMPFTIKESSPMHSYYSDMARKALHS-HNLSV 625
A+ P+ Q G Y PL T+++ + + +K LHS L +
Sbjct: 126 ATLPSNQG-GPLGGYGVPPLNPLPVPGVSSSATLQQQNRAAGQHITPLKKPLHSPQGLPL 184
Query: 626 PQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEK 659
P NF +AP+ Y S L T+ +PP++
Sbjct: 185 PLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQ 218
>At3g08020.1 68416.m00979 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 764
Score = 32.3 bits (70), Expect = 1.2
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 469 FSVSSTVIHNY-KPKTLTGQGFQKFANPLLNFKDNSFTSNYAFDTSASSSNIVTSEDKNI 527
F +ST N+ KT QK A PLL FK S +SS SED+ +
Sbjct: 594 FPAASTSEGNHVDDKTSISPALQKEARPLLKFKLRKPNSG-----DQTSSVTTQSEDEKL 648
Query: 528 NAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDDT 565
++ + +KR K+ S S G TT H D++
Sbjct: 649 SSAKGQRSKR-KRPSSLVDMASLKEDGEATTHSHQDNS 685
>At3g02090.2 68416.m00175 mitochondrial processing peptidase beta
subunit, putative similar to mitochondrial processing
peptidase beta subunit, mitochondrial precursor,
Beta-MPP [Human] SWISS-PROT:O75439
Length = 535
Score = 31.9 bits (69), Expect = 1.6
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 149 SSYLPTAFAEPPGPSIVPHNHAPKKVK-VVKINETPRKKIVRKNKPKRLI 197
+S PTA + PP P ++P++HA + +K +K E P K+ ++ P ++
Sbjct: 37 ASASPTALSPPP-PHLMPYDHAAEIIKNKIKKLENPDKRFLKYASPHPIL 85
>At3g02090.1 68416.m00174 mitochondrial processing peptidase beta
subunit, putative similar to mitochondrial processing
peptidase beta subunit, mitochondrial precursor,
Beta-MPP [Human] SWISS-PROT:O75439
Length = 531
Score = 31.9 bits (69), Expect = 1.6
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 149 SSYLPTAFAEPPGPSIVPHNHAPKKVK-VVKINETPRKKIVRKNKPKRLI 197
+S PTA + PP P ++P++HA + +K +K E P K+ ++ P ++
Sbjct: 37 ASASPTALSPPP-PHLMPYDHAAEIIKNKIKKLENPDKRFLKYASPHPIL 85
>At2g35530.1 68415.m04352 bZIP transcription factor family protein
contains Pfam domain PF00170: bZIP transcription factor;
similar to G-Box binding protein 2 (GI:5381313)
[Catharanthus roseus].
Length = 409
Score = 31.9 bits (69), Expect = 1.6
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 14/130 (10%)
Query: 626 PQASNDNFQYVEAPVSTTTPYFSLLATTAVP----PEKKDVETVDTVAFEQSQYQEAKAR 681
P N Y AP S P +T VP P +D Q Q+ +
Sbjct: 253 PTNLNIGMDYWGAPTSAGIPGMHGKVSTPVPGVVAPGSRDG------GHSQPWLQDDREL 306
Query: 682 QRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIRSKSNKLSYLLESPAT 741
+R K+ N + SR RK+ +L E N+E TN +R++ NKL E T
Sbjct: 307 KRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENTN---LRAEINKLKSQCEE-LT 362
Query: 742 TSKLNYGDKI 751
T + D++
Sbjct: 363 TENTSLKDQL 372
>At4g36490.1 68417.m05181 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; contains Pfam PF00650 :
CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
N-terminus; supporting cDNA gi|23463078|gb|BT000834.1|
Length = 543
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 603 SSPMHSYYSDMARKALHSHNLSVPQASNDNFQYVEAPVSTTTPYFSLLAT--TAVPPEKK 660
SSP++ + M + A+ S ++VP S ++F + ++ ++L+ T +PP+K+
Sbjct: 433 SSPVYCDDASMNKSAMQSEKMTVPAISGEDFMAIMKRMAELEQKVTVLSAQPTVMPPDKE 492
Query: 661 DV 662
++
Sbjct: 493 EM 494
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 2.1
Identities = 46/243 (18%), Positives = 87/243 (35%), Gaps = 13/243 (5%)
Query: 517 SNIVTSED-KNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDDTDIASFPNEQS 575
+N+ ED K++ R+ K K++S+ + + +T + D + ++
Sbjct: 850 TNVGNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEVRDFANNMDIDVQKG 909
Query: 576 PSGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLSVPQASNDNFQY 635
+ Y ++ + G TI SS D +K S N ++ + D +Y
Sbjct: 910 SGESVKYKKDEKKE-GNKEENKDTINTSSKQKG--KDKKKKKKESKNSNMKKKEEDKKEY 966
Query: 636 VEAPV---------STTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQYQEAKARQRSSN 686
V + +T + L EKK+ E + E+ +Y+E K++ +
Sbjct: 967 VNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEA 1026
Query: 687 KEDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIRSKSNKLSYLLESPATTSKLN 746
K++ R K K EE+ K +K K S +S K
Sbjct: 1027 KKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKE 1086
Query: 747 YGD 749
+ D
Sbjct: 1087 HED 1089
>At5g27970.1 68418.m03369 expressed protein
Length = 1629
Score = 31.1 bits (67), Expect = 2.8
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 39 IHLPQXXXXXXXXXXXYITNHPSSQYAPAYMPSAKGAVAVPTNIALPAVASIVPLNSV-- 96
IH P +T PS QYA + S+ + ++ AL V+S+ L S
Sbjct: 655 IHSPHATTQEVATAVPKLTREPSRQYADFSILSSLNSQLFESS-ALMQVSSVKSLLSALH 713
Query: 97 EIYEESPTRTPGTSVTASKLLPLY 120
+ +S T T G+ +AS++ PL+
Sbjct: 714 MLSHQSMTETSGSVSSASRVEPLW 737
>At4g00870.1 68417.m00118 basic helix-loop-helix (bHLH) family
protein similar to the myc family of helix-loop-helix
transcription factors; contains Pfam profile PF00010:
Helix-loop-helix DNA-binding domain; PMID: 12679534
Length = 423
Score = 31.1 bits (67), Expect = 2.8
Identities = 18/67 (26%), Positives = 28/67 (41%)
Query: 264 AKISGIHSAGGVSSLPVQHSLIPLRSSQPILTFSPDTLTGYTAIGSMGTPSHLEYAAYNP 323
AK +G H + S+P+ + +I L SS+ I+ + GS T H P
Sbjct: 146 AKEAGFHGVHTLVSIPINNGIIELGSSESIIQNRNFINRVKSIFGSGKTTKHTNQTGSYP 205
Query: 324 RDVTHDH 330
+ DH
Sbjct: 206 KPAVSDH 212
>At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 31.1 bits (67), Expect = 2.8
Identities = 19/72 (26%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 648 SLLATTAVPPEK-KDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRP-RKRIRA 705
++L ++AVP ++ K+V + +Q+ E+ A+ S+ N +++ +P +K +R
Sbjct: 380 AVLNSSAVPEDQLKEVSVNSSRHGKQNHVGESVAKVVDSSNISNDMMNNTRKPTQKAMRT 439
Query: 706 LKLNTLPEENNK 717
L +N +P E+N+
Sbjct: 440 LFVNYVPHESNR 451
>At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 31.1 bits (67), Expect = 2.8
Identities = 19/72 (26%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 648 SLLATTAVPPEK-KDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRP-RKRIRA 705
++L ++AVP ++ K+V + +Q+ E+ A+ S+ N +++ +P +K +R
Sbjct: 380 AVLNSSAVPEDQLKEVSVNSSRHGKQNHVGESVAKVVDSSNISNDMMNNTRKPTQKAMRT 439
Query: 706 LKLNTLPEENNK 717
L +N +P E+N+
Sbjct: 440 LFVNYVPHESNR 451
>At1g72080.1 68414.m08332 hypothetical protein
Length = 243
Score = 31.1 bits (67), Expect = 2.8
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 681 RQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIRSKSNKLSYLLESPA 740
R RS ++DN + S+ R R R R+ + + P +N + + L+ +ESP+
Sbjct: 43 RNRSRGRDDNQSPSNGGRGRGRGRSRRRSRSPSHSNGGREPPFATINTEEHLTMQIESPS 102
Query: 741 T 741
T
Sbjct: 103 T 103
>At3g48770.1 68416.m05326 hypothetical protein
Length = 1899
Score = 30.7 bits (66), Expect = 3.7
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Query: 393 ENMYSSVNKIKKLKFRPTSQFDTSSENVQNDFRPIPDFNFKNKRIKKTKN-LVPAFDFNI 451
+++ + K+K++ D Q+ + N K KR KTK ++ +
Sbjct: 137 KSLEETEEKLKQIIVVDLDMQDNEVNVGQSSLQSFSSSNRKRKRETKTKPVIIETMTESA 196
Query: 452 DKHVNDYGTSQTGIQDPFSVSSTVIHNYKPKTLTGQGFQKFANPLLNFKDNSFTSNYAFD 511
+H+ ++ I + + +H K L+ + + K + L+ N+ + Y
Sbjct: 197 KQHIERIRRTKFSIGGAENPLTEDLHQ-AVKNLSAELYAKDVHFLMELIQNAEDNEYPEG 255
Query: 512 TSASSSNIVTSED-KNINAPRTFSAKRGKKKSISTQNI 548
S ++TSED N AP T +K S +NI
Sbjct: 256 VDPSLEFVITSEDITNTGAPATLLI-FNNEKGFSEKNI 292
>At5g58480.1 68418.m07324 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 476
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 544 STQNISFGGSGHQTTVDHWDDTDIASFPNEQSPSGNGNYNFEQTQPL 590
S ++ +FGG G TTVD +D S + S S + NF Q+ PL
Sbjct: 420 SAESCNFGGLGLITTVDPSEDNCRFSIQLDTSHSSSQTPNFFQSWPL 466
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 681 RQRSSNK--EDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIR-SKSNKLSYLLE 737
R RSS + ED+S+V H R + R K EE K++ ++ S + + YL
Sbjct: 759 RHRSSRRKHEDSSDVEHGHRHKSSKRIKKDEKTVEEETVSKSDQSDLKASPGDNIPYLQN 818
Query: 738 SPATTS 743
P+ S
Sbjct: 819 EPSQVS 824
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 681 RQRSSNK--EDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIR-SKSNKLSYLLE 737
R RSS + ED+S+V H R + R K EE K++ ++ S + + YL
Sbjct: 759 RHRSSRRKHEDSSDVEHGHRHKSSKRIKKDEKTVEEETVSKSDQSDLKASPGDNIPYLQN 818
Query: 738 SPATTS 743
P+ S
Sbjct: 819 EPSQVS 824
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 106 TPGTSVTASKL-LPLYRARGY-YGPTPTDWEDQEYDLVAPHEASDSSYLPTAFAEPPGPS 163
+P +S AS+ P Y A Y Y P P+ + EY P S Y +++ PP S
Sbjct: 24 SPSSSSWASQQSYPQYGAESYNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQS 83
Query: 164 IVPHNHAPKKVKVVKINE 181
N + K KI++
Sbjct: 84 YGSDNKKRLERKYSKISD 101
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 106 TPGTSVTASKL-LPLYRARGY-YGPTPTDWEDQEYDLVAPHEASDSSYLPTAFAEPPGPS 163
+P +S AS+ P Y A Y Y P P+ + EY P S Y +++ PP S
Sbjct: 24 SPSSSSWASQQSYPQYGAESYNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQS 83
Query: 164 IVPHNHAPKKVKVVKINE 181
N + K KI++
Sbjct: 84 YGSDNKKRLERKYSKISD 101
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 106 TPGTSVTASKL-LPLYRARGY-YGPTPTDWEDQEYDLVAPHEASDSSYLPTAFAEPPGPS 163
+P +S AS+ P Y A Y Y P P+ + EY P S Y +++ PP S
Sbjct: 24 SPSSSSWASQQSYPQYGAESYNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQS 83
Query: 164 IVPHNHAPKKVKVVKINE 181
N + K KI++
Sbjct: 84 YGSDNKKRLERKYSKISD 101
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 106 TPGTSVTASKL-LPLYRARGY-YGPTPTDWEDQEYDLVAPHEASDSSYLPTAFAEPPGPS 163
+P +S AS+ P Y A Y Y P P+ + EY P S Y +++ PP S
Sbjct: 24 SPSSSSWASQQSYPQYGAESYNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQS 83
Query: 164 IVPHNHAPKKVKVVKINE 181
N + K KI++
Sbjct: 84 YGSDNKKRLERKYSKISD 101
>At3g11964.1 68416.m01479 S1 RNA-binding domain-containing protein
similar to SP|Q05022 rRNA biogenesis protein RRP5
{Saccharomyces cerevisiae}; contains Pfam profile
PF00575: S1 RNA binding domain
Length = 1838
Score = 30.3 bits (65), Expect = 4.9
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 628 ASNDNFQYVEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQYQEAKARQRSSNK 687
A+ D+F + E T+ + + ++PP + D++ ++ F+ SQ QE + +NK
Sbjct: 1483 AAVDDFGFQETSGGTSLVLAQVESRASIPPLEVDLDDIEETDFDSSQNQE---KLLGANK 1539
Query: 688 EDNS 691
++ S
Sbjct: 1540 DEKS 1543
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 29.9 bits (64), Expect = 6.5
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 511 DTSASSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDDTDIASF 570
D +S +S+D+++ + + + SF S H+ ++ DD AS
Sbjct: 505 DAVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFRMSAHEDFLELDDDLGAAST 564
Query: 571 PNEQSPSGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSD 612
P E + N + E++ + P T E+ P SY S+
Sbjct: 565 PCEVAEKQNA-FEVEKSHISMPIGEKPLTPSEAMPSTSYISN 605
>At2g42300.1 68415.m05236 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 327
Score = 29.9 bits (64), Expect = 6.5
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 630 NDNFQYVEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQYQEAKARQRSSNKED 689
N NF A + P +L A P E + ++ + +E + + +SS K++
Sbjct: 112 NGNFSGETANSLPSNPGANLDRVKAEPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKN 171
Query: 690 NSNVSHNSRPRKRIRALK-----LNTLPEENNKEKTN 721
S+V + P +RA + ++L E +EK N
Sbjct: 172 KSSVESDKLPYVHVRARRGQATDNHSLAERARREKIN 208
>At1g35110.1 68414.m04352 Ulp1 protease family protein similar to
At5g28170, At1g44880, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1311
Score = 29.9 bits (64), Expect = 6.5
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 500 KDNSFTSNYAFDTSASSSNIVTSEDKN-INAPRTFSAKRGKKKSISTQNISF----GGSG 554
KD++ N +DT A N +D+ I+ + + K+ + NI G
Sbjct: 700 KDDATEDNPIYDTGAKDPNDNEPDDEGKIHFDSSANVSNKKQSPLEEHNIMEVNLEAGEA 759
Query: 555 HQTTVD-HWDDTDIASFPNEQSPSGN 579
Q+ V+ H DD A+ P+ SP GN
Sbjct: 760 SQSVVEPHPDDPMEANSPDCNSPQGN 785
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 656 PPEKKDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEEN 715
P DVE ++ + + ++ K +++S + E N ++++ K+ R K
Sbjct: 193 PSVDSDVEDINLDSTNDGK-KKRKKKKQSEDSETEENGLNSTKDAKKRRKKK-------K 244
Query: 716 NKEKTNVGTIRSKSNKLSYLLESPATTSK-LNYGDKI 751
K+++ V KS+K L +P+T+SK + + D++
Sbjct: 245 KKKQSEVSEAEEKSDKSDEDLTTPSTSSKRVKFSDQV 281
>At4g14310.2 68417.m02205 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 965
Score = 29.5 bits (63), Expect = 8.6
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 577 SGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLSVPQASNDNFQYV 636
+G G +PL +VTP+P + K S+P +K+L S P+ S+ +F
Sbjct: 60 TGAGENPSSGKKPLRSVTPLPISSKNSNP-------ALQKSLSSKENPNPKLSHRSFGST 112
Query: 637 EAPVSTTTP 645
+ PV P
Sbjct: 113 QKPVLRPVP 121
>At4g14310.1 68417.m02204 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 1087
Score = 29.5 bits (63), Expect = 8.6
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 577 SGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLSVPQASNDNFQYV 636
+G G +PL +VTP+P + K S+P +K+L S P+ S+ +F
Sbjct: 60 TGAGENPSSGKKPLRSVTPLPISSKNSNP-------ALQKSLSSKENPNPKLSHRSFGST 112
Query: 637 EAPVSTTTP 645
+ PV P
Sbjct: 113 QKPVLRPVP 121
>At3g58740.1 68416.m06547 citrate synthase, glyoxysomal, putative
strong similarity to SP|P49299 Citrate synthase,
glyoxysomal precursor {Cucurbita maxima}; contains Pfam
profile PF00285: Citrate synthase
Length = 480
Score = 29.5 bits (63), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 375 YMRKYGKPTTTPFPDLSY-ENMYSSVNKIKKLKFRP 409
Y+RK GKP P +LSY EN V + ++P
Sbjct: 233 YLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKP 268
>At3g22380.1 68416.m02825 expressed protein
Length = 1550
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 470 SVSSTVIHNYKPKTLTGQGFQKF---ANPLLNFKDNSFTSNYAFDTSASSSNIVTSEDKN 526
SV+++ P G GF +P K + S + + SSSN V S+
Sbjct: 1211 SVAASAARTKGPVVSNGSGFPDHNMTTSPAGTTKFANANSGFPQNLVQSSSNQVQSQQWK 1270
Query: 527 INAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDH 561
N+PRT + + + S+ + + S + + H
Sbjct: 1271 NNSPRTTNTTQAQSPSMLSPSTSVAAASSLRNIPH 1305
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 29.5 bits (63), Expect = 8.6
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 619 HSHNLSVPQASNDN----FQYVEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQ 674
H PQ N N FQ + P P+F+ T +++ + + EQ
Sbjct: 176 HQQQSQSPQHPNQNQTVSFQNQQLPFQLHQPHFAQAVQTQSQSQQQRSQFDQQLLQEQ-- 233
Query: 675 YQEAKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPE 713
Q+A RQ+ + + + RP + +R + LN E
Sbjct: 234 -QQASWRQQVGQEHSSGSSGDWKRPVEEVRLINLNNATE 271
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/110 (17%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 417 SENVQNDFRPIPDFNFKNKRIKKTKNLVPAFDFNIDKHVNDYGTSQTGIQDPFSVSSTVI 476
+ N +ND + + F + +T+ ++ N K +YGT ++ + ++
Sbjct: 102 NNNNKNDEK-VNSKTFSTPSLSETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNNKYD 160
Query: 477 HNYKPKTLTGQGFQKFANPLLNFKDNSFTSNYAFDTSASSSNIVTSEDKN 526
N+K + + + +A N +N+ NY +D + + + + N
Sbjct: 161 ANFKEEFNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEESFPENNEDN 210
>At1g23760.1 68414.m02998 BURP domain-containing protein /
polygalacturonase, putative similar to polygalacturonase
isoenzyme 1 beta subunit [Lycopersicon esculentum]
GI:170480; contains Pfam profile PF03181: BURP domain
Length = 622
Score = 29.5 bits (63), Expect = 8.6
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 21/157 (13%)
Query: 451 IDKHVNDYGTSQTGIQDPFSVSSTVIHN----YKPKTLTGQG----FQKFANPLLNFKDN 502
+++ N YGTS TG F + ++N +K + G G F+ + + +
Sbjct: 178 VEEKFNSYGTSATGGSGDFKNYQSGVNNPTTRFKAYSDEGNGRAQTFKTYTHEANSGPGQ 237
Query: 503 SFTS-----NYA---FDTSASSSNIVTSEDKNIN-----APRTFSAKRGKKKSISTQNIS 549
SFTS N A F + SSN++ S+ N A TF G S
Sbjct: 238 SFTSYGKNGNGAPNEFSSYGVSSNVIGSDFSNYGENGNAANDTFKGYGGDGNVPQNNFKS 297
Query: 550 FGGSGHQTTVDHWDDTDIASFPNEQSPSGNGNYNFEQ 586
+G SG+ + D A+ ++ S N NFE+
Sbjct: 298 YGASGNAAVDTFLNYRDNANVGDDSFSSYAKNSNFEK 334
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,813,036
Number of Sequences: 28952
Number of extensions: 873882
Number of successful extensions: 2087
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2059
Number of HSP's gapped (non-prelim): 57
length of query: 751
length of database: 12,070,560
effective HSP length: 87
effective length of query: 664
effective length of database: 9,551,736
effective search space: 6342352704
effective search space used: 6342352704
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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