Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000557-TA|BGIBMGA000557-PA|undefined
(412 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 31 0.23
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 30 0.69
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 30 0.69
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 29 0.91
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 29 1.6
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 3.7
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 4.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 6.4
SPAC21E11.08 |lcb2|SPAC2C4.02|serine palmitoyltransferase |Schiz... 27 6.4
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 8.5
SPBPB21E7.09 ||SPAPB21E7.09, SPAPB21E7.09|L-asparaginase |Schizo... 26 8.5
SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr 1|||M... 26 8.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 8.5
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 31.5 bits (68), Expect = 0.23
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 351 DQFPVTFQAEDGTPTSFAGAVGGISGFDAGDRSIIDETPVSVSREAGIQQRTKTGEI 407
D F T A++ PT+ A G + FD+ + +II+ P+S S +G + RT +
Sbjct: 452 DMFSST--AKETVPTNEAVFTGDVKSFDSQESNIIESEPLSASNASG-KPRTSVNRL 505
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 29.9 bits (64), Expect = 0.69
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 298 DTAQTNSPDPFSAGAPP-AVLFASGESYEGNVPID 331
D AQ NSP P + +PP ++F + + E + ID
Sbjct: 600 DAAQENSPQPVNGSSPPYELVFVTRNTEEATITID 634
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 29.9 bits (64), Expect = 0.69
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 284 AAGVHDPFAELTPRDTAQTNSPDPFSAGAPPAVLFASGESYEGNVPIDHFTSSAAAGNV 342
A+G PFA +P + + P S A P+ LF+S S + +HF S++A ++
Sbjct: 218 ASGSFSPFATSSPNFLSTSTPAPPNSNNANPSTLFSSIPS-SRHTTSNHFPSNSAQSSL 275
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 29.5 bits (63), Expect = 0.91
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 291 FAELTPRDTAQTNSPDPFSAGAPPAVLFASGESYEGNVPIDHFTSSAAAGNVGLSSG 347
++++ +D ++NS DP++A AP A+ S G S AA GL+SG
Sbjct: 26 YSDIENKDVLKSNSWDPYAANAPIALSEIPSSSKSGKT-----NGSKAAVESGLASG 77
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 231 FHPLKMTSDHPLPSI 245
FHP+ +TSDHPL SI
Sbjct: 106 FHPVTLTSDHPLWSI 120
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 242 LPSIGSHGYEVTENGDDSNDDVFTSVNS 269
+PS S +T + DS+DDVFT NS
Sbjct: 105 VPSKNSSYETLTYSAKDSSDDVFTETNS 132
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 27.1 bits (57), Expect = 4.8
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 259 SNDD-VFTSVNSLQQSFPATYGYIRGAAGVHDPFAELTPRDTAQTNSPDPFSAGAPPAVL 317
SNDD +S +S P T A ++DP + +T D P PP+
Sbjct: 652 SNDDSTQVEEDSEDKSTPNTGA---SAKLINDPSSTITVSDVYPKKPASPVEITEPPSSA 708
Query: 318 FASGESYEGNVPI 330
S S NVPI
Sbjct: 709 LVSATSPTTNVPI 721
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 231 FHPLKMTSDHPLPSIGSHGYEVTENGDDSNDDVFTSVNSLQQSFPATYGYIRGAAGVHD- 289
F ++ + PL G +++GD+ +D + S + + G A H
Sbjct: 1628 FAKMQPPAPSPLQPSGHDSDNWSQHGDEEEEDSEDDIRSSKDAAALAAKLFGGMAPAHPV 1687
Query: 290 ------PFAELTPRDTAQTNSPDPFSAGAPPA 315
P + P+ +A T P P S PP+
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS 1719
>SPAC21E11.08 |lcb2|SPAC2C4.02|serine palmitoyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 202 IMVTTDILATMDTAITTTNRLHFITSRRQFHPLKMTSDHPLPSIGSHGYEVTENGDDSND 261
I+V + L +M+ ++ + +R +F+ L + H + +IG G + + S D
Sbjct: 329 ILVVIEGLYSMEGNFCDLPKVVELKNRYKFY-LFIDEAHSIGAIGPRGGGICDYFGISTD 387
Query: 262 DVFTSVNSLQQSFPATYGYIRGAAGV 287
V + + +SF A GYI +
Sbjct: 388 HVDILMGTFTKSFGAAGGYISATPNI 413
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 26.2 bits (55), Expect = 8.5
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 301 QTNSPDPFSAGAPPAVLFASGESYEGNV-PIDHFTSSAAAGNVGLSSGESADQFPVTFQA 359
++ +P P L A G + GN + H T+ A++ N ++ S D F +
Sbjct: 23 RSRTPSPEREYCSDCPLQAKGSACNGNSHSLKHETNGASSSNNNVAKSSSHDSFKAKPKN 82
Query: 360 EDGTPTS 366
D T S
Sbjct: 83 YDSTSNS 89
>SPBPB21E7.09 ||SPAPB21E7.09, SPAPB21E7.09|L-asparaginase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 360
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 308 FSAGAPPAVLFASGESYEGNVPIDHFTSSAAAGNVGLSS 346
F+A P +FA G + G T AAG+VG+++
Sbjct: 34 FNASLPNVTIFAMGGTIAGYASSSTETVDYAAGSVGIAT 72
>SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 360
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 308 FSAGAPPAVLFASGESYEGNVPIDHFTSSAAAGNVGLSS 346
F+A P +FA G + G T AAG+VG+++
Sbjct: 34 FNASLPNVTIFAMGGTIAGYASSSTETVDYAAGSVGIAT 72
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 8.5
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 169 VVSMAITDITTSIMAITKIMGITGILVTTVI-LAIMVTTDILATMDTAITTTNRLHFITS 227
+ S + + +T I + T + T I +T + + +T+ + TAIT++ L+ T
Sbjct: 3276 ITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTP 3335
Query: 228 RRQFHPLKMTSDHPLPSIGSHGYEVTENGDDSNDDVFTSVNSLQQSFPAT 277
L ++ SI + VT + ++ TS + S P T
Sbjct: 3336 ITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPIT 3385
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,492,005
Number of Sequences: 5004
Number of extensions: 56128
Number of successful extensions: 155
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 147
Number of HSP's gapped (non-prelim): 14
length of query: 412
length of database: 2,362,478
effective HSP length: 74
effective length of query: 338
effective length of database: 1,992,182
effective search space: 673357516
effective search space used: 673357516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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