Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000557-TA|BGIBMGA000557-PA|undefined
(412 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0569 + 26293891-26294931 36 0.059
06_03_0815 - 24905641-24905874,24905974-24906044,24906678-249068... 32 0.73
04_04_0386 + 24865344-24865973,24866068-24866439 32 0.73
02_03_0411 - 18739279-18739902,18741471-18741671 32 0.73
12_01_0554 + 4498885-4499138,4499249-4499322,4500047-4500129,450... 31 2.2
07_03_0651 + 20287661-20287701,20288034-20288124,20288737-202888... 31 2.2
01_06_0645 + 30826267-30826307,30826403-30826454,30826580-308266... 30 2.9
11_04_0427 + 17627051-17627255,17627325-17627401 30 3.9
09_02_0476 + 9728729-9730739,9730930-9730991 30 3.9
01_06_1436 - 37353741-37354525,37356508-37356619 30 3.9
10_06_0188 - 11603941-11604528 29 6.8
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 6.8
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 29 6.8
01_05_0446 - 22334291-22334751,22335304-22336191,22336290-223365... 29 6.8
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 29 9.0
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 29 9.0
09_02_0477 - 9737851-9739356 29 9.0
06_01_0162 - 1253271-1253639 29 9.0
>04_04_0569 + 26293891-26294931
Length = 346
Score = 35.9 bits (79), Expect = 0.059
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 185 TKIMGITGILVTTVILAIMVTTDILATMDTAITT-TNRLHFITSRRQFHPLKMTSDHPLP 243
+ +M + G +V A + I+AT+ + TT L + T R+ HP +DHP
Sbjct: 55 SSLMPMVGAMVADARFAARPSDIIVATLPKSGTTWIKALLYATVHRREHPADAAADHPFN 114
Query: 244 SIGSH 248
S+G H
Sbjct: 115 SLGPH 119
>06_03_0815 -
24905641-24905874,24905974-24906044,24906678-24906847,
24906862-24906955,24907904-24907948,24908599-24909631
Length = 548
Score = 32.3 bits (70), Expect = 0.73
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 190 ITGILVTTVILAIMVTTDILATMDTAITT-TNRLHFITSRRQFHPLKMTSDHPLPSIGSH 248
+ G +V + A + ++ T+ + TT L + T R+ HP DHP S+G H
Sbjct: 64 LVGTMVADELFAARPSDIVVPTLPKSGTTWIKALLYATVHRREHPADAAGDHPFNSLGPH 123
>04_04_0386 + 24865344-24865973,24866068-24866439
Length = 333
Score = 32.3 bits (70), Expect = 0.73
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 238 SDHPLPSIGSHGYEVTENGDDSNDDVFTSVNSLQQSFPATYGYIRGAAGVHDP-FAELTP 296
+D P P G+HG + DD ++D + L + +G GA G D +A+ P
Sbjct: 112 ADAPKPGSGAHGGDAAAADDDGSNDAEAASWLLPE---PDHGQKDGAVGATDELYADSDP 168
Query: 297 -RDTAQTNSPDPFSA----GAPPAVLFASGESYEGNVPIDHFTSSAAAGNVGLSSGESAD 351
D S D A PP + G+ + + ++H SS+ A V ++
Sbjct: 169 YLDLDFARSMDDIKAIGVQNGPPELDITGGKLFYSDHSMNHSVSSSEAAVVPDAAAGGGA 228
Query: 352 QFPVTFQAED 361
PV + +
Sbjct: 229 PMPVVSRGRE 238
>02_03_0411 - 18739279-18739902,18741471-18741671
Length = 274
Score = 32.3 bits (70), Expect = 0.73
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 246 GSHGYEVTENGDDSNDDVFTSVNSLQQSFPATYGYIRGAAGVHDPFAELTPRDTAQTNSP 305
GS+GY +G D +D+ +S +S S ++ RG+A V + +P D + + +
Sbjct: 165 GSYGYGYGYDGRDGDDEESSSSSSSSSSSSSSASSSRGSA-VSSTLSSFSPTDESASGAG 223
Query: 306 DPFSAGAPPA-VLFASG 321
++ G A VL A+G
Sbjct: 224 SGYAVGDNGAHVLVAAG 240
>12_01_0554 +
4498885-4499138,4499249-4499322,4500047-4500129,
4500298-4500322,4500439-4500458,4501263-4501409,
4501994-4502461
Length = 356
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 195 VTTVILAIMVTTDILATMDTAITTTNRLHFITSRRQFHPL 234
+TTV A D+LA + A TT + LH +T+ +F+ L
Sbjct: 259 LTTVYAAARALVDVLAALKRAETTRDELHRLTTFTEFNNL 298
>07_03_0651 +
20287661-20287701,20288034-20288124,20288737-20288831,
20289433-20289523,20290066-20290250,20290590-20290647,
20290812-20290852,20290935-20291009,20292298-20292354,
20292480-20292546,20292754-20292900,20292986-20293210,
20293332-20293493,20293570-20293647,20293735-20293812
Length = 496
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Query: 206 TDILATMDTAITTTNRLH-----FITSRRQFHPLKMTSDHPLPSIGSHGYEVTENGDDSN 260
+D+L T IT T R + + + +FHP P+P++ HG +V EN DD +
Sbjct: 101 SDVLGTNRLNITKTVRKYSIDRNLVPTGSEFHP------GPIPTVSKHGDDVEENHDDGS 154
>01_06_0645 +
30826267-30826307,30826403-30826454,30826580-30826659,
30826804-30826882,30826962-30827045,30827131-30827276,
30827362-30827628,30827825-30827907,30828162-30828271,
30828544-30829159,30829471-30829620,30829700-30829800
Length = 602
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 286 GVHDPFAELTPRDTAQTNSPDPFSAGAPPAVLFASGESYEGNVPIDHFTSSAAAGNVGLS 345
G ++ + PR + + +P+ + P LFA N P++ T S + L
Sbjct: 261 GENEDDDDFNPRGFSTSTTPNVSTPAVPEVDLFADAAFQSANAPLEAATVSHTQDKIDLF 320
Query: 346 SG--ESADQF 353
+G SAD F
Sbjct: 321 AGRLSSADSF 330
>11_04_0427 + 17627051-17627255,17627325-17627401
Length = 93
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 183 AITKIMGITGILVTTVILAIMVTTDILATMDTAITTTNRLHFITSRRQFHPL 234
A+ K++ G + ++A TT TA TT+ +T RR HPL
Sbjct: 25 AVEKVVEAQGEVKAASVMAAATTTTSCGDSATATATTSYNDNVTGRRHKHPL 76
>09_02_0476 + 9728729-9730739,9730930-9730991
Length = 690
Score = 29.9 bits (64), Expect = 3.9
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 8/137 (5%)
Query: 250 YEVTENGDDSNDDVFTS-VNSLQQSFPATYGYIRGAAGVHDPFAELTPRDTAQTNSPDPF 308
Y+ T NG +T N+ ++SF A YG + A G + F + D +
Sbjct: 273 YDHTGNGRSREFSEYTQDANTGEESF-AAYG--KTANGAAESFRTYGNHSNSIATGFDNY 329
Query: 309 SAGAPPAVLFASGESYEGNVPIDHFTSSAAAGNVGLSSGES-ADQFPVTFQAEDGTPTSF 367
A A S GN P + F S A+ N G+ + D V D +
Sbjct: 330 GDRANGAADAFSSYGASGNTPENTFKSYASGSNAGVDDFKGYRDDANV---GNDSFTSYA 386
Query: 368 AGAVGGISGFDAGDRSI 384
+ A G +GF++ +S+
Sbjct: 387 SNANGAAAGFESYGKSV 403
>01_06_1436 - 37353741-37354525,37356508-37356619
Length = 298
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 219 TNRLHFITSRRQFHPLKMTSDHPLPSIGSHGYEVTE---NGDDSNDDVFTSVNSLQQS 273
++RL FIT + Q P + D PL ++ + + +E N DD+F + LQ+S
Sbjct: 18 SDRLAFITGQAQSLPSDPSPDSPLYTVDAASLQRSERQLNEVGIGDDIFNYITQLQKS 75
>10_06_0188 - 11603941-11604528
Length = 195
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 285 AGVHDPFAELTPRDTAQTNSPDPFSAGAP-PAVLFASG 321
A D +A TP ++A T SP P +A AP PA A G
Sbjct: 79 AAAADGWAPFTPFNSAPTPSPPPATAAAPAPAPARAGG 116
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 339 AGNVGLS-SGESADQFPVTFQAEDGTPTSFAGAV----GGISGFDAGDRSIIDETPVSVS 393
AGN+ L +G +A Q P F + G P++ AG V GG +G D + + S+
Sbjct: 193 AGNMTLGLTGMAAPQLPAGFPDQAGQPSASAGDVLRLGGGSNGASQFDHLMASSSGSSMF 252
Query: 394 REAG 397
R G
Sbjct: 253 RSQG 256
>02_01_0297 +
1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 235 KMTSDHPLPSIGSHGYEVTENGDDSNDDVFTSVNSLQQSFPATYGYIRGAAGVHDPFAEL 294
+M PS + +++ G SN + +++ ++ + G++ G GVH +L
Sbjct: 250 QMQQQKQFPS-NQNSHQIQHIGGHSNSGMHSNMLENSSAYGLSDGHVNGGMGVHGSNMQL 308
Query: 295 TPRDTA 300
T R A
Sbjct: 309 TNRSAA 314
>01_05_0446 -
22334291-22334751,22335304-22336191,22336290-22336550,
22337129-22337588
Length = 689
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 295 TPRDTAQTNSPDPFSAGAPPAVLFASGESYEGNVPIDHFTSSAAA 339
TP D + P PFSAG P + S G+ H S A
Sbjct: 269 TPADLISPDMPQPFSAGISPQITPGSSSDGHGHCTGTHCPPSTKA 313
>10_07_0176 - 13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 28.7 bits (61), Expect = 9.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 346 SGESADQFPVTF-QAEDGTPTSFAGAVGGISGFDAGDRSI-IDETPVSVSREAGIQQRTK 403
S E A + ++ E T FA G F A + + + P V+R A ++QR K
Sbjct: 1079 SPEEARSYAISMLPRESSKHTGFAFDSPGYESFFASQQGVGVPHKPWDVARRASMKQRQK 1138
Query: 404 TG 405
TG
Sbjct: 1139 TG 1140
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 28.7 bits (61), Expect = 9.0
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 304 SPDP-FSAGAPPAVLFASGESYEGNVPIDHFTSSAAAGNVGLSSGES 349
S DP +AG+ P + F+SGES G PI + + ++ G + ES
Sbjct: 28 SIDPSLAAGSAPVLCFSSGESLRGINPILEYIAQSSPSLHGRDAIES 74
>09_02_0477 - 9737851-9739356
Length = 501
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 289 DPFAELTPRDTAQTNSPDPFSAGAPPAVLFASGE 322
DPFA L PRD A + + G PPA F+ E
Sbjct: 177 DPFAVLRPRD-AVDDDDENGGGGGPPATTFSMPE 209
>06_01_0162 - 1253271-1253639
Length = 122
Score = 28.7 bits (61), Expect = 9.0
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 335 SSAAAGNVGLSSGESADQFPVTFQAEDGTPTSFAGAVGGISGFDAGDRSIIDETPVSVSR 394
S AA G G G++A++ T A DG P F G G DAGD S + E V+
Sbjct: 62 SGAATGAAG---GDAAEEEGET-GAGDGVPAKF-----GRGGGDAGDESGVVEPREVVAT 112
Query: 395 EAGIQ 399
G+Q
Sbjct: 113 STGVQ 117
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,856,438
Number of Sequences: 37544
Number of extensions: 397885
Number of successful extensions: 1123
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1117
Number of HSP's gapped (non-prelim): 21
length of query: 412
length of database: 14,793,348
effective HSP length: 84
effective length of query: 328
effective length of database: 11,639,652
effective search space: 3817805856
effective search space used: 3817805856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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