Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000555-TA|BGIBMGA000555-PA|IPR001594|Zinc finger,
DHHC-type
(295 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09320.1 68416.m01106 zinc finger (DHHC type) family protein ... 91 8e-19
At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein ... 90 2e-18
At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein ... 89 3e-18
At4g22750.1 68417.m03283 zinc finger (DHHC type) family protein ... 88 6e-18
At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein ... 83 3e-16
At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein ... 78 6e-15
At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein ... 78 6e-15
At2g14255.1 68415.m01593 zinc finger (DHHC type) family protein ... 77 1e-14
At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein ... 75 8e-14
At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein ... 75 8e-14
At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein ... 74 1e-13
At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein ... 73 2e-13
At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein ... 73 2e-13
At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein ... 73 3e-13
At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein ... 72 4e-13
At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein ... 70 2e-12
At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein ... 68 7e-12
At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein ... 62 3e-10
At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein ... 62 4e-10
At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein ... 60 2e-09
At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein ... 60 2e-09
At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein ... 57 1e-08
At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein ... 56 4e-08
At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein ... 56 4e-08
At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein ... 55 5e-08
At3g51390.1 68416.m05629 zinc finger (DHHC type) family protein ... 55 7e-08
At3g18290.1 68416.m02326 zinc finger protein-related weak alignm... 31 1.2
At5g55800.1 68418.m06954 DC1 domain-containing protein contains ... 29 2.8
At5g04370.1 68418.m00429 S-adenosyl-L-methionine:carboxyl methyl... 29 2.8
At1g33680.1 68414.m04166 KH domain-containing protein similar to... 29 3.7
At5g48090.1 68418.m05941 expressed protein ; expression supporte... 29 4.9
At1g32530.1 68414.m04014 zinc finger (C3HC4-type RING finger) fa... 29 4.9
At3g01310.1 68416.m00042 expressed protein similar to unknown pr... 28 6.5
At1g74770.1 68414.m08663 expressed protein 28 8.6
>At3g09320.1 68416.m01106 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 286
Score = 91.1 bits (216), Expect = 8e-19
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 66 REGQVIFKCTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIA 125
R+G + C KC KP RAHHC VC+RC+ +MDHHC W+NNCVG N K F +F Y
Sbjct: 91 RKGGDLRYCQKCSHFKPPRAHHCRVCKRCVLRMDHHCIWINNCVGHTNYKVFFVFVVYAV 150
Query: 126 AISIHAVCLSVYQFITCIRHEWRECSTY 153
++++ L V + E E +Y
Sbjct: 151 TACVYSLVLLVGSLTVEPQDEEEEMGSY 178
>At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 284
Score = 89.8 bits (213), Expect = 2e-18
Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 73 KCTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAISIHAV 132
KC KC + KP R HHC VC+RC+ KMDHHC W+NNCVG N K F + FY SI++
Sbjct: 106 KCDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGYANYKAFFILVFYATVASIYST 165
Query: 133 CLSV 136
L V
Sbjct: 166 VLLV 169
>At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein
contains DHHC zinc finger domain PF01529
Length = 307
Score = 89.0 bits (211), Expect = 3e-18
Identities = 34/50 (68%), Positives = 37/50 (74%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFY 123
C KC +KP R HHCSVC RC+ KMDHHC WV NCVG N KYF+LF FY
Sbjct: 129 CRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFY 178
>At4g22750.1 68417.m03283 zinc finger (DHHC type) family protein
contains DHHC zinc finger domain PF01529
Length = 302
Score = 88.2 bits (209), Expect = 6e-18
Identities = 35/50 (70%), Positives = 37/50 (74%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFY 123
C KC KP R+HHCSVC RCI KMDHHC WV NCVG NN K F+LF FY
Sbjct: 118 CRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFY 167
>At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 262
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 74 CTKCCSIKPERAHHCSVC----------QRCIRKMDHHCPWVNNCVGENNQKYFVLFTFY 123
CTKC ++KP R HHCSVC QRC+ KMDHHC W+ NCVG N K+F+LF FY
Sbjct: 48 CTKCRNVKPPRCHHCSVCKAKSDLFILCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFY 107
Query: 124 IAAISIHAVCLSVYQFITCIRHEWRECSTYSPPATVV 160
++ V + + FI + S+ A++V
Sbjct: 108 TFLETMLDVIVLLPSFIEFFSQAIKHSSSPGKLASLV 144
>At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 316
Score = 78.2 bits (184), Expect = 6e-15
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 73 KCTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFY 123
+C+ C KP R+ HCS+C RC+ + DHHC W+NNC+GE N KYF+ F +
Sbjct: 161 ECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLW 211
>At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 397
Score = 78.2 bits (184), Expect = 6e-15
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 73 KCTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFY 123
+C+ C KP R+ HCS+C RC+ + DHHC W+NNC+GE N KYF+ F +
Sbjct: 161 ECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLW 211
>At2g14255.1 68415.m01593 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain;
low similarity to SP:Q96GR4 Zinc finger DHHC domain
containing protein 12 (Zinc finger protein 400) {Homo
sapiens}
Length = 288
Score = 77.0 bits (181), Expect = 1e-14
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAIS 128
C C I+P R+ HC C+RC+ + DHHCPW++NCVG+ N++YF++F A S
Sbjct: 117 CPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKKNKRYFLVFVIMGALTS 171
>At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein /
ankyrin repeat family protein similar to patsas protein
[Drosophila melanogaster] GI:6002770; contains Pfam
profiles PF00023: Ankyrin repeat, PF01529: DHHC zinc
finger domain
Length = 592
Score = 74.5 bits (175), Expect = 8e-14
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLF 120
C C I+P RA HCS C RC+ + DHHCPWV+NCVG+ N+ F LF
Sbjct: 345 CATCKIIRPLRAKHCSTCDRCVEQFDHHCPWVSNCVGKKNKWEFFLF 391
>At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 443
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTF--YIAAISIHA 131
C C +P R HCS+C C+ + DHHCPWV C+G N ++F +F F + I + A
Sbjct: 151 CDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGMRNYRFFFMFVFSTTLLCIYVFA 210
Query: 132 VCLSVYQFITCIRHEWRECSTYSPPATVV 160
C + I H + PA++V
Sbjct: 211 FCWVYIRKIMESEHTTTWKAMLKTPASIV 239
>At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529 DHHC zinc finger domain
Length = 345
Score = 74.1 bits (174), Expect = 1e-13
Identities = 28/67 (41%), Positives = 35/67 (52%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAISIHAVC 133
C C K R HHC C C+ MDHHCP++ NCVG N KYF+ F + +A
Sbjct: 150 CNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIAFLISAVISTSYAAV 209
Query: 134 LSVYQFI 140
+ VY I
Sbjct: 210 MCVYTLI 216
>At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 374
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAISIHAVC 133
C C +P R HCS+C C+ + DHHCPWV C+G N +YF +F + I+
Sbjct: 138 CDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSSTLLCIYIFS 197
Query: 134 LSVYQFITCIRHE----WRECSTYSPPATVV 160
+S + H+ WR SP A V+
Sbjct: 198 MSAVYIKILMDHQQATVWRAMKE-SPWAVVL 227
>At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 477
Score = 72.9 bits (171), Expect = 2e-13
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAISIHAVC 133
C C +P RA HCS+C C+++ DHHCPWV C+G N ++F +F + I+
Sbjct: 148 CDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIGVRNYRFFFMFISTSTTLCIYVFA 207
Query: 134 LS 135
S
Sbjct: 208 FS 209
>At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 476
Score = 72.5 bits (170), Expect = 3e-13
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTF--YIAAISIHA 131
C C +P RA HCS+C C+ K DHHCPW+ C+G N +++ +F + I +H
Sbjct: 160 CDTCMLYRPPRASHCSICNNCVEKFDHHCPWLGQCIGLRNYRFYFMFVLCSTLLCIYVHV 219
Query: 132 VC 133
C
Sbjct: 220 FC 221
>At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 410
Score = 72.1 bits (169), Expect = 4e-13
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAISIH 130
C C +P R HCS+C C+ + DHHCPWV C+ + N ++F +F F + ++
Sbjct: 149 CDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIAQRNYRFFFMFVFSTTLLCVY 205
>At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 386
Score = 70.1 bits (164), Expect = 2e-12
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAISIHAVC 133
C C +P RA HCS+C C+++ DHHCPWV C+ N YF+ F I+ ++ +C
Sbjct: 137 CDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIALRNYPYFICF---ISTSTL--LC 191
Query: 134 LSVYQF 139
L V+ F
Sbjct: 192 LYVFVF 197
>At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 338
Score = 68.1 bits (159), Expect = 7e-12
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAISIHAVC 133
C C +P RA HCS+C C+++ DHHCPWV C+ N +FV F + I+
Sbjct: 144 CDTCQLYRPPRAFHCSICNNCVQRFDHHCPWVGQCIALRNYPFFVCFLSCSTLLCIYVFV 203
Query: 134 LS 135
S
Sbjct: 204 FS 205
>At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 339
Score = 62.5 bits (145), Expect = 3e-10
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYF 117
C C +P RA HCS+C C+++ DHHCPWV C+ + F
Sbjct: 173 CDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIARTTYENF 216
>At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 499
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 66 REGQVIFKCTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIA 125
+E I C+ C + HC C RC+ DHHC W+NNCVG+ N F+L ++
Sbjct: 143 KEEDDISYCSLCDLEVKRSSKHCRTCNRCVEGFDHHCRWLNNCVGKKNYTTFILLMVFVL 202
Query: 126 AISIHAVCLSVYQFITC 142
+ I ++ F+ C
Sbjct: 203 LMLIIEGGTALAVFVRC 219
>At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 58 EMIKQMSFREGQVIFKCTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYF 117
E +QMS +G +F C+ C + + HC VC +C+ + DHHC W+NNC+G+ N + F
Sbjct: 152 ESSEQMS-EDG--MFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKF 208
Query: 118 VLFTFYIAAI 127
F+ ++AI
Sbjct: 209 --FSLMVSAI 216
>At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 58 EMIKQMSFREGQVIFKCTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYF 117
E +QMS +G +F C+ C + + HC VC +C+ + DHHC W+NNC+G+ N + F
Sbjct: 152 ESSEQMS-EDG--MFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKF 208
Query: 118 VLFTFYIAAI 127
F+ ++AI
Sbjct: 209 --FSLMVSAI 216
>At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 565
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 38 CCGGKAWCIKGAVPKGNATKEMIKQMSFREGQVIFKCTKCCSIKPERAHHCSVCQRCIRK 97
CC I G + + ++ ++ S + + +F C+ C + + HC C +C+
Sbjct: 111 CCSAIGRFICGCLVIQDCRRDTQQEQSNEQEEALF-CSLCNAEVRMFSKHCRSCGKCVDG 169
Query: 98 MDHHCPWVNNCVGENNQKYFV 118
DHHC W+NNCVG+ N FV
Sbjct: 170 FDHHCRWLNNCVGQKNYISFV 190
>At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 407
Score = 55.6 bits (128), Expect = 4e-08
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIAAISIHAVC 133
C C +P R HCS+C C+ + DHHCPW N +YF +F + I+
Sbjct: 138 CDTCMLYRPPRCSHCSICNNCVERFDHHCPW-------RNYRYFFMFVSSATILCIYIFS 190
Query: 134 LS 135
+S
Sbjct: 191 MS 192
>At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 718
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 57 KEMIKQMSFREGQVIFKCTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKY 116
+E +Q RE + +F CT C + + + HC C +C+ DHHC W+NNCVG N
Sbjct: 161 EETDEQQGDRE-EALF-CTLCNAEVRKFSKHCRSCDKCVDCFDHHCRWLNNCVGRKNYMT 218
Query: 117 FV 118
F+
Sbjct: 219 FI 220
>At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 706
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 74 CTKC-CSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFV 118
CT C C ++ + + HC C +C+ DHHC W+NNCVG N FV
Sbjct: 174 CTLCNCEVR-KFSKHCRSCDKCVDCFDHHCKWLNNCVGRKNYVTFV 218
>At3g51390.1 68416.m05629 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 340
Score = 54.8 bits (126), Expect = 7e-08
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 74 CTKCCSIKPERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYF 117
C C +P R HC C RC+ + DHHC W+ C+G+ N F
Sbjct: 164 CGYCHVEQPPRTKHCHDCDRCVLQFDHHCVWLGTCIGQKNHSKF 207
>At3g18290.1 68416.m02326 zinc finger protein-related weak alignment
to Pfam profiles: PF00097 Zinc finger, C3HC4 type (RING
finger) (2 copies)
Length = 1254
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 75 TKCCSIKPERAHHCSVCQRC-IRKMDHHCPWVNNC-VGE 111
T C P H+CS+C+ + +HCP+ N C VGE
Sbjct: 1063 TPSCDGFPMAKHYCSICKLFDDERAVYHCPFCNLCRVGE 1101
>At5g55800.1 68418.m06954 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 578
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 24 CQVLTRPDKDMHNRCCGGKAWCIKGAVPKGNATKEMIKQMSFREGQVIFKCTKCCS 79
C DK C GK +K G+ K+ + ++ + I+KC CC+
Sbjct: 504 CDGKEASDKPYWCEICEGKIEVVKEKANSGDKKKKRLPTNRDKKERKIYKCNDCCT 559
>At5g04370.1 68418.m00429 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 396
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 215 YDPEDKSLKDVLPSSGQFEAFYPRETHGIPNG 246
YDP +K +K+++ G FE ETHG G
Sbjct: 291 YDPNEKEIKEMVQKEGSFE-IRDLETHGYDLG 321
>At1g33680.1 68414.m04166 KH domain-containing protein similar to
FUSE binding protein 2 GB:AAC50892 GI:1575607 from [Homo
sapiens]
Length = 759
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 227 PSSGQF--EAFYPRETHGIPNGSSRPAHG-HGSFYNYRN 262
P SG F +A+ PR G P SR HG H YNY +
Sbjct: 393 PYSGGFNQQAYQPRGPGGPPQWGSRGPHGPHSMPYNYHH 431
>At5g48090.1 68418.m05941 expressed protein ; expression supported
by MPSS
Length = 636
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 1 MIREFYDSSEDDEMESKYQIDSECQVLTRPDKDMHNRCCGGKAWCIKGAVPK-GNATKEM 59
M E SS DD+ E+ Q D C + D + CC G C++ P + +
Sbjct: 10 MTDEENSSSSDDDSEANLQFDPVCSIC---DNGGYVLCCEGS--CLRSFHPTIADGIETE 64
Query: 60 IKQMSFRE-GQVIFKCTKCCSIKPERAHHCSVC 91
+ + F + Q+ T C+ + H C C
Sbjct: 65 CESLGFTDKTQIQALGTYLCNNCLYKQHQCYAC 97
>At1g32530.1 68414.m04014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); weak similarity to
interaptin (GI:3549261) [Dictyostelium discoideum] weak
similarity to Axoneme-associated protein mst101(2)
(Swiss-Prot:Q08696) [Drosophila hydei]
Length = 711
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 1 MIREFYDSSEDDEMESKYQIDSECQV--LTRPDKDMHNRCCGGKAWCIKGAVPKGNATKE 58
++ +F D + DD +ES D +C + L KD + K W K A+ E
Sbjct: 346 VLEKFRDLNLDDNLESVGVDDKDCVIVDLLHQVKDFEKKVKERKEWAQKNAMQAAQKVSE 405
Query: 59 MIKQM----SFREGQVIFK 73
+ ++ S REG + K
Sbjct: 406 ELAELKTLSSEREGIQLLK 424
>At3g01310.1 68416.m00042 expressed protein similar to unknown
protein GB:BAA24863 [Homo sapiens], unknown protein
GB:BAA20831 [Homo sapiens], unknown protein GB:AAB42264
[Caenorhabditis elegans]
Length = 1056
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 7 DSSEDDEMESKYQIDSECQVLTRPDKDMHNR 37
D EDD+ E+KY++D + + P++ + R
Sbjct: 852 DKDEDDDKETKYRLDPKYANVKTPERHVRTR 882
>At1g74770.1 68414.m08663 expressed protein
Length = 985
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 227 PSSGQFEAFYP--RETHGIPNGSSRPAHGHGSFYNYRNPALVDVK 269
PSSG F+ F+ +++ IPN P HG F N L D++
Sbjct: 271 PSSGCFQRFWEWSKKSLSIPNVGRSPIHGLRLFQNAIEKDLRDIQ 315
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.325 0.138 0.458
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,279,475
Number of Sequences: 28952
Number of extensions: 303428
Number of successful extensions: 959
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 909
Number of HSP's gapped (non-prelim): 42
length of query: 295
length of database: 12,070,560
effective HSP length: 81
effective length of query: 214
effective length of database: 9,725,448
effective search space: 2081245872
effective search space used: 2081245872
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)
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