GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000554-TA|BGIBMGA000554-
PA|IPR009078|Ferritin/ribonucleotide reductase-like
         (428 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    30   0.11 
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    29   0.18 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    28   0.42 
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    25   5.2  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 30.3 bits (65), Expect = 0.11
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 177 EIKVPDWKKI-YKPEWKPIKVPGWKDVKVPDWKK--ITVPVYKDIVVPGWKEIQVPAWKK 233
           + K  DW K  + P+    K   W D    +W+   I  P YK    P  K+I  PA+K 
Sbjct: 227 DTKPEDWDKPEHIPDPDATKPDDWDDEMDGEWEPPMIDNPEYKGEWKP--KQIDNPAYKG 284

Query: 234 IWV-PE 238
           +WV PE
Sbjct: 285 VWVHPE 290



 Score = 24.2 bits (50), Expect = 6.9
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 288 IPDKKLVWKDEWKQIWKTEKKQIWIDDKKLVWKEAWQ--QIWKPSKKLIWV 336
           IPD      D+W      E +   ID+ +  +K  W+  QI  P+ K +WV
Sbjct: 239 IPDPDATKPDDWDDEMDGEWEPPMIDNPE--YKGEWKPKQIDNPAYKGVWV 287


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 0.18
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 178 IKVPDWKKIYKPEWKPIKVPGWKDVKVPDWKKITVPVYKDIVVPGWKEIQVPAWKKIWVP 237
           I VP + K+Y P+  P++V   + +K+P +K I   + K +     K   +   K   V 
Sbjct: 184 IAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVE 243

Query: 238 EWVKLGIPGEK 248
              K  +P  K
Sbjct: 244 VLKKFEVPVPK 254



 Score = 25.0 bits (52), Expect = 4.0
 Identities = 19/56 (33%), Positives = 24/56 (42%)

Query: 174 VWKEIKVPDWKKIYKPEWKPIKVPGWKDVKVPDWKKITVPVYKDIVVPGWKEIQVP 229
           V + IK+P +K I K   KP+     K   +   K   V V K   VP  K   VP
Sbjct: 204 VEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVP 259


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 28.3 bits (60), Expect = 0.42
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 379 PNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAPKAP 419
           P  ++   + H  + +   E   K   +I E P   APKAP
Sbjct: 151 PQQYQQQQQQHQLEHNGGREQMMKNETSIDEVPNAPAPKAP 191


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 24.6 bits (51), Expect = 5.2
 Identities = 7/30 (23%), Positives = 19/30 (63%)

Query: 194 IKVPGWKDVKVPDWKKITVPVYKDIVVPGW 223
           I+V   + V  P+++ +T P+++++ +  W
Sbjct: 248 IRVVNSQVVTKPEYQLLTAPLFRNVTIAAW 277


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.135    0.476 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,260
Number of Sequences: 2123
Number of extensions: 14970
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 8
length of query: 428
length of database: 516,269
effective HSP length: 66
effective length of query: 362
effective length of database: 376,151
effective search space: 136166662
effective search space used: 136166662
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 49 (23.8 bits)