Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000553-TA|BGIBMGA000553-PA|IPR002007|Haem peroxidase,
animal, IPR001611|Leucine-rich repeat, IPR007110|Immunoglobulin-like,
IPR003591|Leucine-rich repeat, typical subtype,
IPR000483|Cysteine-rich flanking region, C-terminal,
IPR003599|Immunoglobulin subtype, IPR003598|Immunoglobulin subtype 2,
IPR013098|Immunoglobulin I-set, IPR010255|Haem peroxidase
(1329 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 38 0.009
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 30 1.9
SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase... 30 2.5
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 29 3.3
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 29 4.4
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 29 5.8
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 29 5.8
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 5.8
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 29 5.8
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 29 5.8
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 28 7.6
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 28 7.6
SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr 2||... 28 7.6
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 28 7.6
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 37.9 bits (84), Expect = 0.009
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 72 LKHLEQLYLHVNEIHHIEPETFSNLPR--LDRLYLHNNKLKSIPYGSFQGMPKLRKLRLD 129
L+ LE L + N+I+ ++P FS L R L L + NNKL +P+ S + + L L L
Sbjct: 475 LRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPH-STRYLVNLTYLDLS 533
Query: 130 SNALICDCSILWFIRMLENNEWMHVAATCYQPASVTGTSLAAMKH-----HDLPCQQPQF 184
N + I+ + LE + H + Q +S G SL +KH +DL + PQ
Sbjct: 534 YNNFVTFPLIITELSQLETLNFSHNLLS--QISSKIG-SLVKLKHLYLQFNDLSNRLPQE 590
Query: 185 ESEPNDVE-VSFGENAVFTCVATGEPAPEI 213
++E + NA+ T +A+ P++
Sbjct: 591 IGLLKNLETIDLSYNAI-TNIASLSECPKL 619
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 67 DVFQDLKHLEQLYLHVNEIHHIEPETFSNLPRLDRLYLHNNKLKSIPYGSFQGMPKLRKL 126
D Q L L +L N I + T SNL RL+ L L NN+++ I + L L
Sbjct: 706 DGIQHLDGLLKLSACNNRIKELS-FTNSNLHRLEELLLGNNEIEEIE--EISSLQNLMVL 762
Query: 127 RLDSNAL 133
+LD+N L
Sbjct: 763 QLDNNKL 769
>SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 444
Score = 29.9 bits (64), Expect = 2.5
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 321 GERMLLNERIILQHNGSILIKNVQNSDAGVYTCQV-ENIHGKISASVPLEVTAPPSFIVV 379
GE +L N RI+ G ++ ++ ++ E +H + ++ P+ V PP V
Sbjct: 268 GEEVLRNNRIL----GRLMPSRAFGDARYKWSQEISERLHREYFSASPIPVKTPPYVTAV 323
Query: 380 PTNQTAII-----------GDNVWFTCKAKGTPKPSIKWYRNTVILPITGNL-VLSDDNQ 427
P ++ + D +W T ++ + +W +TV+ T DD Q
Sbjct: 324 PEIESITVNPKKHRFLIMASDGLWDTMSSEQAVQLVGEW-ADTVLGKTTNEKNTTQDDKQ 382
Query: 428 NLTLLEVTR---DDDAIYHCRAENDGGMIE-ASAVLTL 461
+ +L + T DD+A H + GG + SA+LTL
Sbjct: 383 SWSLFKKTSKVIDDNAATHLIRHSLGGSDQRISALLTL 420
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 61 IKHIDSDVFQDLKHLEQLYLHVNEIHHIEPETFSNLPRLDRLYLHNNKLKSIPYGSFQGM 120
IK I ++ + L L + N + PE+ L L+ L + NK+K +P SF +
Sbjct: 64 IKSIGPEILK-FTRLRYLNIRSNVLREF-PESLCRLESLEILDISRNKIKQLP-ESFGAL 120
Query: 121 PKLRKLRLDSNAL 133
L+ L + N L
Sbjct: 121 MNLKVLSISKNRL 133
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 1176 LMEQFVRLRDGDRFWYENPSVFKPDQLRQIKETSL 1210
L + + L DR Y N + + PD++++IKE L
Sbjct: 760 LADNYTLLSKHDRAMYNNYADYSPDKIKEIKEKEL 794
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 348 AGVYTCQVENIHGKISASVPLEVTAPPSFIVVPTNQTAIIGDNVWFTCKAKGTPKPSIKW 407
AG + HG++S + V +F V +N ++ N F +++G S
Sbjct: 778 AGYVASETAYHHGEVSMEQTI-VNLAQNF--VGSNNINLLMPNGQFGTRSEGGKNASASR 834
Query: 408 YRNTVILPITGNLVLSDDNQNL 429
Y NT + P+ L S+D+Q L
Sbjct: 835 YLNTALSPLARVLFNSNDDQLL 856
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 367 PLEVTAPPSFIVVPTNQTAIIGDNV 391
P+E+ PPS + P+ A++G NV
Sbjct: 1048 PIEIRIPPSCFLNPSETAAVVGGNV 1072
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 1002 SNVFATAALRFGHSLINPVLHRYDENFETIPQGHLLLRNAFFSPWRLVDEGGVDPLLRGM 1061
+N + T F SL N ++ +D+ HL+ + D+ G D L++ +
Sbjct: 763 NNQYVTLRENFD-SLQNAIMETFDKQVTHCSVNHLVQQIRKLKDENKKDQSGTDKLMKKI 821
Query: 1062 FTTPAKLKTSKQNLNSELTEK 1082
+ LK +L + ++EK
Sbjct: 822 YHCEQSLKEKTNSLETLVSEK 842
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 1257 SCNFDLDTEREKRRARRDVDSNITNGRFNKLEHLQNDLVHTIEMLKKRIEILEATCKAND 1316
SC + +EK ++ N R + +E+ +NDL T++ LK+RI LE K +
Sbjct: 312 SCTEKILRFKEKILDLLEMKQQEENDRISHIEY-ENDL--TVKKLKRRISELEMAVKEYE 368
Query: 1317 TLSFSNEFPFEEE 1329
+ +E +EE+
Sbjct: 369 SEKSYSEKEYEEK 381
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 513 DRISITVIGSLIIRNVSVTDTGRYEC 538
D + + V G LI+ +T+ GRY+C
Sbjct: 498 DNVCVAVAGGLILFFEGITEVGRYQC 523
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 767 LDHDLDHALPPVSSQTWDGVDCKKTCD-YAPPCFPIDVPLNDPRVNNRR 814
+ +DL H+ PV S T +G D T D Y+ ID +++ N+R
Sbjct: 53 IPNDLFHSSQPVGSPTRNGDDIPSTLDLYSSDNAAIDTDISEDETINQR 101
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 75 LEQLYLHVNEIHHIEPETFSNLPRLDRLYLHNN 107
LE LYL NEI + +F NL L L L NN
Sbjct: 219 LEVLYLEANEIILSKATSFKNLQFLQTLSLANN 251
>SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 7.6
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Query: 1193 NPSVFKPDQLRQIKETSLARILCDNGDNIDTISENVFYLPEVQDGLVSCEDLP----SMD 1248
N +V PDQ + K + RI + I+ E + L ++ +D P +
Sbjct: 27 NQAVGGPDQTKHQK-SEFTRIAQKIANQINQTGEKLQKLSQLAKRKTLFDDRPVEIQELT 85
Query: 1249 LRFWADCESCNFDLDTEREKRRARRDVDSNITNGRFNKLEHLQNDLVHTIEMLKKRIEIL 1308
+ S N D+ + ++ + R+ + + N + LQN L +T K +EI
Sbjct: 86 FQIKQSLSSLNSDIASLQQVVKGNRNKPAQMNQHSENVVVSLQNSLANTSMTFKDILEIR 145
Query: 1309 EATCKAN 1315
KA+
Sbjct: 146 TQNMKAS 152
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 78 LYLHVN--EIHHIEPETFSNLPRLDRLYLHNNKLKSIPYGSFQGMPKLRKLRLDSNALIC 135
LYL + ++ I F +L L L L N+L IPY + +P+L L L SN I
Sbjct: 335 LYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPY-ALGELPQLCSLNLASNK-IT 392
Query: 136 DCSILWFIRM 145
C + I +
Sbjct: 393 GCRTFYHISL 402
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.137 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,308,671
Number of Sequences: 5004
Number of extensions: 279615
Number of successful extensions: 693
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 677
Number of HSP's gapped (non-prelim): 26
length of query: 1329
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1248
effective length of database: 1,957,154
effective search space: 2442528192
effective search space used: 2442528192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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