GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000552-TA|BGIBMGA000552-PA|IPR010987|Glutathione
S-transferase, C-terminal-like, IPR012336|Thioredoxin-like fold
         (326 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione S-tran...    25   2.9  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   3.8  
AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione S-tran...    24   5.1  

>AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione
           S-transferase D11 protein.
          Length = 214

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 192 LRVLSDLLNDRPFFFGDEPTLLDVVAFSNLAQLQFIDKEVEHPLRDAMN 240
           L  L   L+  PF  GD+ T+ D   FS L  +  ID    H L    N
Sbjct: 134 LEFLESFLDKTPFAAGDKLTVAD---FSLLTSITTIDVTAGHDLSKYAN 179


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 24  PFYRSIDRHRRARPPP 39
           P   + +RHRR RPPP
Sbjct: 325 PVPGAAERHRRRRPPP 340


>AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione
           S-transferase u3 protein.
          Length = 218

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 192 LRVLSDLLNDRPFFFGDEPTLLDVVAFSNLAQLQFIDKEVE 232
           L  L   L+   +  G+E TL D+ A +N+A L+ I   +E
Sbjct: 138 LEKLDSYLDGCDWIAGEECTLADLCALANVATLKEIGVGME 178


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.138    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,879
Number of Sequences: 2123
Number of extensions: 12872
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 3
length of query: 326
length of database: 516,269
effective HSP length: 64
effective length of query: 262
effective length of database: 380,397
effective search space: 99664014
effective search space used: 99664014
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)