Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000551-TA|BGIBMGA000551-PA|IPR012336|Thioredoxin-like
fold
         (121 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   0.47 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   7.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 0.47
 Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 90  VETWLRLAGIKYEIISCFPQTNILSCAVDWP 120
           +ETW +L G +  +I+     N++SC +++P
Sbjct: 626 IETWNKLFGYQILLITFQSGLNVVSC-INFP 655


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/40 (20%), Positives = 22/40 (55%)

Query: 66  KDVVYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYEIIS 105
           K +    Q++++  L     + ++ + +  L+G KY+I++
Sbjct: 341 KSIAIKVQYAKSLNLAGVMIWSIETDDFNGLSGTKYQILN 380


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 88  LKVETWLRLAGIKYEIIS 105
           LK+ET  R  G  Y I++
Sbjct: 197 LKIETSCRYVGTLYRILT 214


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.132    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,920
Number of Sequences: 317
Number of extensions: 807
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 121
length of database: 114,650
effective HSP length: 50
effective length of query: 71
effective length of database: 98,800
effective search space:  7014800
effective search space used:  7014800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)