BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000551-TA|BGIBMGA000551-PA|IPR012336|Thioredoxin-like fold (121 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_47009| Best HMM Match : WSC (HMM E-Value=0.16) 48 2e-06 SB_53541| Best HMM Match : GST_C (HMM E-Value=0.02) 37 0.005 SB_53542| Best HMM Match : GST_C (HMM E-Value=0.018) 37 0.005 SB_31647| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.012 SB_46116| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.15 SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.15 SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8 SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 27 4.2 SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5 SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 27 5.5 SB_45142| Best HMM Match : Herpes_IE68 (HMM E-Value=3.8) 26 7.3 SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15) 26 7.3 SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 26 7.3 SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3 SB_8005| Best HMM Match : Glutaredoxin (HMM E-Value=0.00023) 26 7.3 SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3 SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) 26 7.3 SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3 SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3 SB_50560| Best HMM Match : rve (HMM E-Value=7.2e-15) 26 7.3 SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05) 26 7.3 SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13) 26 7.3 SB_24375| Best HMM Match : rve (HMM E-Value=7.2e-15) 26 7.3 SB_23420| Best HMM Match : rve (HMM E-Value=2.7e-11) 26 7.3 SB_213| Best HMM Match : rve (HMM E-Value=2.2e-08) 26 7.3 SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7 SB_59485| Best HMM Match : Dickkopf_N (HMM E-Value=0.2) 26 9.7 SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 26 9.7 SB_26856| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7 >SB_47009| Best HMM Match : WSC (HMM E-Value=0.16) Length = 852 Score = 48.0 bits (109), Expect = 2e-06 Identities = 21/49 (42%), Positives = 35/49 (71%), Gaps = 2/49 (4%) Query: 65 EKDVVYLYQFSRTPLLP--STSPYCLKVETWLRLAGIKYEIISCFPQTN 111 +++ V L+QF R P LP + SP CLK+ETW+R+A I Y++ + F +++ Sbjct: 598 DQNPVILHQFPRNPRLPVPNISPPCLKLETWMRMAKIPYDVNTAFKKSS 646 >SB_53541| Best HMM Match : GST_C (HMM E-Value=0.02) Length = 256 Score = 36.7 bits (81), Expect = 0.005 Identities = 15/31 (48%), Positives = 24/31 (77%), Gaps = 1/31 (3%) Query: 73 QFSRTPLLPSTSPYCLKVETWLRLAGIKYEI 103 +F++ P+ PS SP CLK+ET+ R+A I+Y + Sbjct: 15 RFAKLPV-PSISPSCLKLETYARMANIQYHV 44 >SB_53542| Best HMM Match : GST_C (HMM E-Value=0.018) Length = 261 Score = 36.7 bits (81), Expect = 0.005 Identities = 15/31 (48%), Positives = 24/31 (77%), Gaps = 1/31 (3%) Query: 73 QFSRTPLLPSTSPYCLKVETWLRLAGIKYEI 103 +F++ P+ PS SP CLK+ET+ R+A I+Y + Sbjct: 21 RFAKLPV-PSISPSCLKLETYARMANIQYHV 50 >SB_31647| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 381 Score = 35.5 bits (78), Expect = 0.012 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 66 KDVVYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYEIISCFPQTNILSCAVDW 119 K VV L Q + +PS SP+ LK+E++LRLA I Y+ + F T+ + W Sbjct: 27 KGVVLLRQPAVATTVPSISPFPLKLESYLRLAKIPYK--NYFSSTSSSKGKIPW 78 >SB_46116| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 169 Score = 31.9 bits (69), Expect = 0.15 Identities = 15/34 (44%), Positives = 20/34 (58%) Query: 69 VYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYE 102 V L+Q P +P P LK+ET+LR+ I YE Sbjct: 39 VILHQHPPGPTIPGFLPNSLKLETYLRMVKIPYE 72 >SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 615 Score = 31.9 bits (69), Expect = 0.15 Identities = 15/34 (44%), Positives = 20/34 (58%) Query: 69 VYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYE 102 V L+Q P +P P LK+ET+LR+ I YE Sbjct: 275 VILHQHPPGPTIPGFLPNSLKLETYLRMVKIPYE 308 >SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 410 Score = 28.3 bits (60), Expect = 1.8 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 66 KDVVYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYEIISCFP---QTNILSCA 116 K Y + P P+C V+ WL+ + + II C +T ++ CA Sbjct: 26 KIATYPFDDHNAPPFELIKPFCDDVDEWLKASNLNVAIIHCKAGKGRTGVMICA 79 >SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) Length = 547 Score = 27.1 bits (57), Expect = 4.2 Identities = 10/25 (40%), Positives = 16/25 (64%) Query: 10 PENAPEKEKDMKEDAPADNGQSKEA 34 P+NAP+ +++ P D+GQS A Sbjct: 28 PQNAPDSWDSIEDPGPGDSGQSLAA 52 >SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1137 Score = 26.6 bits (56), Expect = 5.5 Identities = 10/20 (50%), Positives = 16/20 (80%) Query: 15 EKEKDMKEDAPADNGQSKEA 34 E+E++ KEDA D+ ++KEA Sbjct: 1081 EEEEEKKEDAKTDDSETKEA 1100 >SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) Length = 360 Score = 26.6 bits (56), Expect = 5.5 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Query: 5 VTNNIPE-NAPEKEKDMKEDAPADNGQSK 32 +T N PE NA EK +D ED P D + + Sbjct: 41 LTTNKPEDNADEKPEDNPEDKPEDKTEDR 69 >SB_45142| Best HMM Match : Herpes_IE68 (HMM E-Value=3.8) Length = 292 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 16 ETFLRLWGIKHRLSSVGFPQSN 37 >SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15) Length = 1485 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 1350 ETFLRLWGIKHRLSSVGFPQSN 1371 >SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) Length = 1213 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 891 ETFLRLWGIKHRLSSVGFPQSN 912 >SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3592 Score = 26.2 bits (55), Expect = 7.3 Identities = 9/19 (47%), Positives = 16/19 (84%) Query: 9 IPENAPEKEKDMKEDAPAD 27 IPE++ E+E+DMK+D+ + Sbjct: 285 IPESSDEEEEDMKDDSKTE 303 >SB_8005| Best HMM Match : Glutaredoxin (HMM E-Value=0.00023) Length = 271 Score = 26.2 bits (55), Expect = 7.3 Identities = 11/28 (39%), Positives = 14/28 (50%) Query: 83 TSPYCLKVETWLRLAGIKYEIISCFPQT 110 T P+C KV +L GI Y + P T Sbjct: 103 TCPFCCKVRAYLEYFGIDYTKVEVNPLT 130 >SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1269 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 947 ETFLRLWGIKHRLSSVGFPQSN 968 >SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) Length = 707 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 551 ETFLRLWGIKHRLSSVGFPQSN 572 >SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1412 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 947 ETFLRLWGIKHRLSSVGFPQSN 968 >SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 675 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 376 ETFLRLWGIKHRLSSVGFPQSN 397 >SB_50560| Best HMM Match : rve (HMM E-Value=7.2e-15) Length = 364 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 274 ETFLRLWGIKHRLSSVGFPQSN 295 >SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05) Length = 848 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 527 ETFLRLWGIKHRLSSVGFPQSN 548 >SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13) Length = 776 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 692 ETFLRLWGIKHRLSSVGFPQSN 713 >SB_24375| Best HMM Match : rve (HMM E-Value=7.2e-15) Length = 638 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 554 ETFLRLWGIKHRLSSVGFPQSN 575 >SB_23420| Best HMM Match : rve (HMM E-Value=2.7e-11) Length = 388 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 298 ETFLRLWGIKHRLSSVGFPQSN 319 >SB_213| Best HMM Match : rve (HMM E-Value=2.2e-08) Length = 745 Score = 26.2 bits (55), Expect = 7.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 91 ETWLRLAGIKYEIISC-FPQTN 111 ET+LRL GIK+ + S FPQ+N Sbjct: 333 ETFLRLWGIKHRLSSVGFPQSN 354 >SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1438 Score = 25.8 bits (54), Expect = 9.7 Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 5 VTNNIPENAPEKEKDMKEDAPADNGQSKEAPL 36 V N P AP K K + E P + QS + P+ Sbjct: 235 VKPNSPTEAPAKIKSISEPGPPEGLQSFDVPI 266 >SB_59485| Best HMM Match : Dickkopf_N (HMM E-Value=0.2) Length = 450 Score = 25.8 bits (54), Expect = 9.7 Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 10 PENAPEKEKDMKEDAPADNGQSKE 33 PE +KEK+ E P D G SK+ Sbjct: 266 PEPEEDKEKENGESQPRDGGTSKK 289 >SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) Length = 378 Score = 25.8 bits (54), Expect = 9.7 Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 1 MTVEVTNNIPENAPEKEKDMKEDAPADNG 29 +T VT N+P + +E+ E PAD G Sbjct: 297 VTATVTGNVPPHVIARERTKVEVVPADAG 325 >SB_26856| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 52 Score = 25.8 bits (54), Expect = 9.7 Identities = 10/31 (32%), Positives = 18/31 (58%) Query: 83 TSPYCLKVETWLRLAGIKYEIISCFPQTNIL 113 T+ +K E +RL +K ++I C P N++ Sbjct: 20 TAMTSMKYEKLVRLITVKKKLIGCHPSINVI 50 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.315 0.132 0.406 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,783,491 Number of Sequences: 59808 Number of extensions: 117228 Number of successful extensions: 295 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 277 Number of HSP's gapped (non-prelim): 30 length of query: 121 length of database: 16,821,457 effective HSP length: 74 effective length of query: 47 effective length of database: 12,395,665 effective search space: 582596255 effective search space used: 582596255 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 54 (25.8 bits)
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