Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000551-TA|BGIBMGA000551-PA|IPR012336|Thioredoxin-like
fold
(121 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47009| Best HMM Match : WSC (HMM E-Value=0.16) 48 2e-06
SB_53541| Best HMM Match : GST_C (HMM E-Value=0.02) 37 0.005
SB_53542| Best HMM Match : GST_C (HMM E-Value=0.018) 37 0.005
SB_31647| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.012
SB_46116| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.15
SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.15
SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 27 4.2
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 27 5.5
SB_45142| Best HMM Match : Herpes_IE68 (HMM E-Value=3.8) 26 7.3
SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15) 26 7.3
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 26 7.3
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_8005| Best HMM Match : Glutaredoxin (HMM E-Value=0.00023) 26 7.3
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) 26 7.3
SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_50560| Best HMM Match : rve (HMM E-Value=7.2e-15) 26 7.3
SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05) 26 7.3
SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13) 26 7.3
SB_24375| Best HMM Match : rve (HMM E-Value=7.2e-15) 26 7.3
SB_23420| Best HMM Match : rve (HMM E-Value=2.7e-11) 26 7.3
SB_213| Best HMM Match : rve (HMM E-Value=2.2e-08) 26 7.3
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_59485| Best HMM Match : Dickkopf_N (HMM E-Value=0.2) 26 9.7
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 26 9.7
SB_26856| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
>SB_47009| Best HMM Match : WSC (HMM E-Value=0.16)
Length = 852
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/49 (42%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 65 EKDVVYLYQFSRTPLLP--STSPYCLKVETWLRLAGIKYEIISCFPQTN 111
+++ V L+QF R P LP + SP CLK+ETW+R+A I Y++ + F +++
Sbjct: 598 DQNPVILHQFPRNPRLPVPNISPPCLKLETWMRMAKIPYDVNTAFKKSS 646
>SB_53541| Best HMM Match : GST_C (HMM E-Value=0.02)
Length = 256
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/31 (48%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 73 QFSRTPLLPSTSPYCLKVETWLRLAGIKYEI 103
+F++ P+ PS SP CLK+ET+ R+A I+Y +
Sbjct: 15 RFAKLPV-PSISPSCLKLETYARMANIQYHV 44
>SB_53542| Best HMM Match : GST_C (HMM E-Value=0.018)
Length = 261
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/31 (48%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 73 QFSRTPLLPSTSPYCLKVETWLRLAGIKYEI 103
+F++ P+ PS SP CLK+ET+ R+A I+Y +
Sbjct: 21 RFAKLPV-PSISPSCLKLETYARMANIQYHV 50
>SB_31647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 35.5 bits (78), Expect = 0.012
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 66 KDVVYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYEIISCFPQTNILSCAVDW 119
K VV L Q + +PS SP+ LK+E++LRLA I Y+ + F T+ + W
Sbjct: 27 KGVVLLRQPAVATTVPSISPFPLKLESYLRLAKIPYK--NYFSSTSSSKGKIPW 78
>SB_46116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 69 VYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYE 102
V L+Q P +P P LK+ET+LR+ I YE
Sbjct: 39 VILHQHPPGPTIPGFLPNSLKLETYLRMVKIPYE 72
>SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 69 VYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYE 102
V L+Q P +P P LK+ET+LR+ I YE
Sbjct: 275 VILHQHPPGPTIPGFLPNSLKLETYLRMVKIPYE 308
>SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 66 KDVVYLYQFSRTPLLPSTSPYCLKVETWLRLAGIKYEIISCFP---QTNILSCA 116
K Y + P P+C V+ WL+ + + II C +T ++ CA
Sbjct: 26 KIATYPFDDHNAPPFELIKPFCDDVDEWLKASNLNVAIIHCKAGKGRTGVMICA 79
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 10 PENAPEKEKDMKEDAPADNGQSKEA 34
P+NAP+ +++ P D+GQS A
Sbjct: 28 PQNAPDSWDSIEDPGPGDSGQSLAA 52
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 15 EKEKDMKEDAPADNGQSKEA 34
E+E++ KEDA D+ ++KEA
Sbjct: 1081 EEEEEKKEDAKTDDSETKEA 1100
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 5 VTNNIPE-NAPEKEKDMKEDAPADNGQSK 32
+T N PE NA EK +D ED P D + +
Sbjct: 41 LTTNKPEDNADEKPEDNPEDKPEDKTEDR 69
>SB_45142| Best HMM Match : Herpes_IE68 (HMM E-Value=3.8)
Length = 292
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 16 ETFLRLWGIKHRLSSVGFPQSN 37
>SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 1485
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 1350 ETFLRLWGIKHRLSSVGFPQSN 1371
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 891 ETFLRLWGIKHRLSSVGFPQSN 912
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/19 (47%), Positives = 16/19 (84%)
Query: 9 IPENAPEKEKDMKEDAPAD 27
IPE++ E+E+DMK+D+ +
Sbjct: 285 IPESSDEEEEDMKDDSKTE 303
>SB_8005| Best HMM Match : Glutaredoxin (HMM E-Value=0.00023)
Length = 271
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 83 TSPYCLKVETWLRLAGIKYEIISCFPQT 110
T P+C KV +L GI Y + P T
Sbjct: 103 TCPFCCKVRAYLEYFGIDYTKVEVNPLT 130
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 947 ETFLRLWGIKHRLSSVGFPQSN 968
>SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14)
Length = 707
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 551 ETFLRLWGIKHRLSSVGFPQSN 572
>SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1412
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 947 ETFLRLWGIKHRLSSVGFPQSN 968
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 376 ETFLRLWGIKHRLSSVGFPQSN 397
>SB_50560| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 364
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 274 ETFLRLWGIKHRLSSVGFPQSN 295
>SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05)
Length = 848
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 527 ETFLRLWGIKHRLSSVGFPQSN 548
>SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13)
Length = 776
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 692 ETFLRLWGIKHRLSSVGFPQSN 713
>SB_24375| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 638
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 554 ETFLRLWGIKHRLSSVGFPQSN 575
>SB_23420| Best HMM Match : rve (HMM E-Value=2.7e-11)
Length = 388
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 298 ETFLRLWGIKHRLSSVGFPQSN 319
>SB_213| Best HMM Match : rve (HMM E-Value=2.2e-08)
Length = 745
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 91 ETWLRLAGIKYEIISC-FPQTN 111
ET+LRL GIK+ + S FPQ+N
Sbjct: 333 ETFLRLWGIKHRLSSVGFPQSN 354
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 5 VTNNIPENAPEKEKDMKEDAPADNGQSKEAPL 36
V N P AP K K + E P + QS + P+
Sbjct: 235 VKPNSPTEAPAKIKSISEPGPPEGLQSFDVPI 266
>SB_59485| Best HMM Match : Dickkopf_N (HMM E-Value=0.2)
Length = 450
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 10 PENAPEKEKDMKEDAPADNGQSKE 33
PE +KEK+ E P D G SK+
Sbjct: 266 PEPEEDKEKENGESQPRDGGTSKK 289
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 1 MTVEVTNNIPENAPEKEKDMKEDAPADNG 29
+T VT N+P + +E+ E PAD G
Sbjct: 297 VTATVTGNVPPHVIARERTKVEVVPADAG 325
>SB_26856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 83 TSPYCLKVETWLRLAGIKYEIISCFPQTNIL 113
T+ +K E +RL +K ++I C P N++
Sbjct: 20 TAMTSMKYEKLVRLITVKKKLIGCHPSINVI 50
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.132 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,783,491
Number of Sequences: 59808
Number of extensions: 117228
Number of successful extensions: 295
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 277
Number of HSP's gapped (non-prelim): 30
length of query: 121
length of database: 16,821,457
effective HSP length: 74
effective length of query: 47
effective length of database: 12,395,665
effective search space: 582596255
effective search space used: 582596255
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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