GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000551-TA|BGIBMGA000551-PA|IPR012336|Thioredoxin-like
fold
         (121 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011583-1|AAH11583.1|  409|Homo sapiens chromosome 6 open readi...    44   1e-04
BC004869-1|AAH04869.2|  409|Homo sapiens chromosome 6 open readi...    44   1e-04
AL034371-1|CAI19992.2|  409|Homo sapiens chromosome 6 open readi...    44   1e-04

>BC011583-1|AAH11583.1|  409|Homo sapiens chromosome 6 open reading
           frame 168 protein.
          Length = 409

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/38 (50%), Positives = 29/38 (76%), Gaps = 1/38 (2%)

Query: 66  KDVVYLYQFSRTPL-LPSTSPYCLKVETWLRLAGIKYE 102
           KD + L+QF+R    +PS SP+CLK+ET+LR+A + Y+
Sbjct: 97  KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQ 134


>BC004869-1|AAH04869.2|  409|Homo sapiens chromosome 6 open reading
           frame 168 protein.
          Length = 409

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/38 (50%), Positives = 29/38 (76%), Gaps = 1/38 (2%)

Query: 66  KDVVYLYQFSRTPL-LPSTSPYCLKVETWLRLAGIKYE 102
           KD + L+QF+R    +PS SP+CLK+ET+LR+A + Y+
Sbjct: 97  KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQ 134


>AL034371-1|CAI19992.2|  409|Homo sapiens chromosome 6 open reading
           frame 168 protein.
          Length = 409

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/38 (50%), Positives = 29/38 (76%), Gaps = 1/38 (2%)

Query: 66  KDVVYLYQFSRTPL-LPSTSPYCLKVETWLRLAGIKYE 102
           KD + L+QF+R    +PS SP+CLK+ET+LR+A + Y+
Sbjct: 97  KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQ 134


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.132    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,836,695
Number of Sequences: 224733
Number of extensions: 520139
Number of successful extensions: 1377
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1374
Number of HSP's gapped (non-prelim): 3
length of query: 121
length of database: 73,234,838
effective HSP length: 81
effective length of query: 40
effective length of database: 55,031,465
effective search space: 2201258600
effective search space used: 2201258600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)