Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000550-TA|BGIBMGA000550-PA|undefined
         (1178 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   3.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      25   4.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   9.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 220 SEQENDEDEMSPTHWCWLHLSSQVIYLILIGFASFPN 256
           S   N+++E +   +C +     V+Y I +G+  F N
Sbjct: 461 SNNNNNKEEGNSCQYCNIAFGDAVLYTIHMGYHGFHN 497


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 94  KGVREIMKQLAKLLTSFVESTKPCAQMVSIIGHSNMLPVVEFSGFADHLVNPWRL 148
           +G+ +  KQLA  L     + K   + +SI      LPV EF   ++ + N W L
Sbjct: 224 RGIPDTSKQLAAALGMQTTNEKEIFERLSI------LPVDEFLQISEEVANIWGL 272


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 747 VDAINDIIWKYNIVTIDRLVLCLVLR 772
           ++ + DIIWK  +      V C V+R
Sbjct: 76  INVLTDIIWKTTVAWYAGNVACKVIR 101


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,160
Number of Sequences: 317
Number of extensions: 12675
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 3
length of query: 1178
length of database: 114,650
effective HSP length: 64
effective length of query: 1114
effective length of database: 94,362
effective search space: 105119268
effective search space used: 105119268
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 48 (23.4 bits)