Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000550-TA|BGIBMGA000550-PA|undefined
(1178 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5088| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 4e-47
SB_37194| Best HMM Match : Pigment_DH (HMM E-Value=4.9) 117 6e-26
SB_53983| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-25
SB_13538| Best HMM Match : Pigment_DH (HMM E-Value=4.9) 100 8e-21
SB_18850| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-19
SB_3112| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-19
SB_12223| Best HMM Match : ShTK (HMM E-Value=1.8e-09) 36 0.26
SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.34
SB_2969| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.3
SB_6235| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.6
>SB_5088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 187 bits (456), Expect = 4e-47
Identities = 90/200 (45%), Positives = 131/200 (65%), Gaps = 19/200 (9%)
Query: 581 LVSSESEELNRVLVLTLARGIHMAGAGSDGAAVKELLTTIMTNTPHMWSQHTLQCFPPVL 640
++S+ESEELNR LVLT+AR +H+ GA S G +L ++ NTPH W+ HTL CFP L
Sbjct: 1 ILSAESEELNRALVLTIARSMHVTGAESSGNWCDGILGVLIANTPHSWASHTLACFPQPL 60
Query: 641 VEFFNQISAQK--ENKQLLKKSVEEEYRKWTSMANDNDIISHFSVPGTPLFLCLLWKMIF 698
+F+++ + + KQ L+ VEEEYR+W SM +++++++HF+ P L +W
Sbjct: 61 QQFYSENPTDRPVKTKQALRNHVEEEYRRWKSMTSEHELLAHFTDP--TLSNVFIW---- 114
Query: 699 ETNRINPIAFKILERIGARALSAHLRKFCDYLVFEVTDPAGGPHIYKCVDAINDIIWKYN 758
ILE++GARALS+H+R F D+LV+E + GG H+ KC+ +ND+IWKYN
Sbjct: 115 -----------ILEQLGARALSSHVRFFADFLVYEFSTSGGGKHVNKCIQHLNDLIWKYN 163
Query: 759 IVTIDRLVLCLVLRPNPDGN 778
+VT+DRLVLCLV P G+
Sbjct: 164 VVTLDRLVLCLVRNTRPPGS 183
>SB_37194| Best HMM Match : Pigment_DH (HMM E-Value=4.9)
Length = 371
Score = 117 bits (281), Expect = 6e-26
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 29/167 (17%)
Query: 57 RMLCDCILTNEKLIYQNADFWIECFSLIRRIIGGVDYKGVREIM---------------- 100
R +C+ +L +E L + + W + F L+R I GG DYKG R+++
Sbjct: 78 RSVCEAVLKSEHLKFDDEVKWCKSFQLLRVISGGTDYKGCRDVLSLVFQKFNLIPKEPDP 137
Query: 101 ----------KQLAKLLTSFVESTKPCAQMVSIIGHSNMLPVVEFSGFADHLVNPWRLDP 150
K L+KLL+ +V+S +P A MV++ G +LP++ G + W+LDP
Sbjct: 138 AYTDRIECAVKSLSKLLSDYVDSFRPLAHMVTVTGRPLLLPII---GHPSSSIGVWKLDP 194
Query: 151 TTLKFSLKGNLPYDDELLKPQIGLIRHVLQQPYSRDMMCSMLGLQKQ 197
TL F +KG LPY+ L KPQ L+++V+ QPYSR+++CSMLGL KQ
Sbjct: 195 ATLSFPMKGLLPYNKSLFKPQKNLLQYVIGQPYSREIICSMLGLNKQ 241
>SB_53983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 116 bits (278), Expect = 1e-25
Identities = 50/96 (52%), Positives = 75/96 (78%)
Query: 199 KQQCIALEDQLVELMILPMEKSEQENDEDEMSPTHWCWLHLSSQVIYLILIGFASFPNIV 258
KQ+C+ALE+ LV+L+++ MEKSE + + + W HLSS +I+ +L FASFP++V
Sbjct: 52 KQRCLALEELLVDLIVIAMEKSEHDQSGLDDTACQLLWQHLSSHLIFFVLFQFASFPHMV 111
Query: 259 MGLHNKLVGHDMKKGRDHLMWVLLQFISGSIQRHPL 294
+ L++KL G ++++GRDHLMWVLLQFISGSIQ++P+
Sbjct: 112 LALYDKLQGRNLRQGRDHLMWVLLQFISGSIQKNPV 147
>SB_13538| Best HMM Match : Pigment_DH (HMM E-Value=4.9)
Length = 223
Score = 100 bits (239), Expect = 8e-21
Identities = 45/95 (47%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
Query: 103 LAKLLTSFVESTKPCAQMVSIIGHSNMLPVVEFSGFADHLVNPWRLDPTTLKFSLKGNLP 162
L+KLL+ +V+S +P A MV++ G +LP++ G + W+LDP TL F +KG LP
Sbjct: 2 LSKLLSDYVDSFRPLAHMVTVTGRPLLLPII---GHPSSSIGVWKLDPATLSFPMKGLLP 58
Query: 163 YDDELLKPQIGLIRHVLQQPYSRDMMCSMLGLQKQ 197
Y+ L KPQ L+++V+ QPYSR+++CSMLGL KQ
Sbjct: 59 YNKSLFKPQKNLLQYVIGQPYSREIICSMLGLNKQ 93
>SB_18850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 96.7 bits (230), Expect = 1e-19
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
Query: 992 FPNTDWRFNEYPNPSAHALYVTCVELMSLPVAPNYVGNSLLDVITKGFVVIP-----TTK 1046
FP DWRFNE+PNP+AHAL+VTCVELM+LPV+ VG L DVI +G V+P +
Sbjct: 13 FPTCDWRFNEFPNPAAHALHVTCVELMALPVSGKQVGFRLFDVIYRGSTVVPRESRMRDQ 72
Query: 1047 LQLWINAIGLIMAALP 1062
L WINA+GL+M +LP
Sbjct: 73 LMAWINAVGLVMTSLP 88
>SB_3112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 95.9 bits (228), Expect = 2e-19
Identities = 43/90 (47%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 581 LVSSESEELNRVLVLTLARGIHMAGAGSDGAAVKELLTTIMTNTPHMWSQHTLQCFPPVL 640
++S+ESEELNR LVLT+AR +H+ GA S G +L ++ NTPH W+ HTL CFP L
Sbjct: 1 ILSAESEELNRALVLTIARSMHVTGAESSGNWCDGILGVLIANTPHSWASHTLACFPQPL 60
Query: 641 VEFFNQISAQK--ENKQLLKKSVEEEYRKW 668
+F+++ + + KQ L+ VEEEYR+W
Sbjct: 61 QQFYSENPTDRPVKTKQALRNHVEEEYRRW 90
>SB_12223| Best HMM Match : ShTK (HMM E-Value=1.8e-09)
Length = 542
Score = 35.5 bits (78), Expect = 0.26
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 298 IPIIKLHELLYPEKDPLPVPDYSKAHCTHQMAVVCIWMHLLKKAETEHKTMTMPPNLKVQ 357
I ++ LH L P+ VP + +C + + +VC +H L +T H ++P N V
Sbjct: 299 IRLVCLHNLHNPDTHHPSVPGNTLVNCDYAIRLVC--LHNLHNPDTRHP--SIPGNTLVN 354
Query: 358 YDFLQHLMTSNNIPTLGSDYRIALLCNAYSTNQEYYARPMGIIIETLFGNQKPLPNGSTT 417
D+ L+ NN+ D R + N +Y R + T G Q P T
Sbjct: 355 CDYAIRLVCLNNLH--NPDTRHPSVPGNTLVNCDYAIRRGTGAVPTQ-GTQGPTTVAPRT 411
Query: 418 APLPTVPLSMCILDSLTLHC 437
P + D ++ C
Sbjct: 412 ESTPAPVIGCVDYDVISFQC 431
Score = 34.7 bits (76), Expect = 0.45
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 298 IPIIKLHELLYPEKDPLPVPDYSKAHCTHQMAVVCIWMHLLKKAETEHKTMTMPPNLKVQ 357
I ++ LH L P+ VP + +C + + +VC +H L +T H ++P N V
Sbjct: 209 IRLVCLHNLHNPDTRHPSVPGNTLVNCDYAIRLVC--LHNLHNPDTRHP--SIPGNTLVN 264
Query: 358 YDFLQHLMTSNNI 370
D+ L+ NN+
Sbjct: 265 CDYAIRLVCLNNL 277
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 298 IPIIKLHELLYPEKDPLPVPDYSKAHCTHQMAVVCIWMHLLKKAETEHKTMTMPPNLKVQ 357
I ++ LH L P+ VP + +C + + +VC +H L +T H ++P N V
Sbjct: 149 IRLVCLHNLHNPDTHHPSVPGNTLVNCDYAIRLVC--LHNLHNPDTRHP--SIPGNTLVN 204
Query: 358 YDFLQHLMTSNNI 370
D+ L+ +N+
Sbjct: 205 CDYAIRLVCLHNL 217
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 298 IPIIKLHELLYPEKDPLPVPDYSKAHCTHQMAVVCIWMHLLKKAETEHKTMTMPPNLKVQ 357
I ++ LH L P+ VP + +C + + +VC +H L +T H ++P N V
Sbjct: 29 IRLVCLHNLHNPDTRHPSVPGNTLVNCDYAIRLVC--LHNLHNPDTRHP--SIPGNTLVN 84
Query: 358 YDFLQHLMTSNNI 370
D+ L+ +N+
Sbjct: 85 CDYAIRLVCLHNL 97
>SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 179 LQQPYSRDMMCSMLGLQKQHKQQCIALEDQLVELMI--LPMEKSEQENDEDEMSPTHWCW 236
L+ P+ MMC G + HK C D + L++ P+ + EN E+ W W
Sbjct: 111 LKHPFHTGMMCEQCGHKAAHKTNCENRHDMELPLLLPRRPVLTTPNEN-ENIAQYGFWLW 169
Query: 237 LHLSS 241
LH+ +
Sbjct: 170 LHVDN 174
>SB_2969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 30.7 bits (66), Expect = 7.3
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 562 LGSSGVQLQMSRVVSEPKSLVSSESEELNRVLVLTLARGIHMAG 605
L SSGV++Q V++ L+ + S ++NR +V L +H G
Sbjct: 50 LVSSGVEIQKLSVITNLPKLLETNSADVNRRVVPLLRDAVHQLG 93
>SB_6235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.3 bits (65), Expect = 9.6
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 508 HDLLDMFSYRIHHVQPHYRVQLLSNIHSLAAYPQANQTQLQLCFESTALRLITSLGSSGV 567
HD++D +Y + HV HY L+ + + +P + ++ FE L G+SG+
Sbjct: 62 HDVVD--TYNVMHVVGHYVEALVFGV--MGEWPGEGE---EILFEDPFLN---EPGTSGL 111
Query: 568 QLQMSRVVSEPKSLVSSESEE 588
QLQ + + +S S + EE
Sbjct: 112 QLQQQEGLGKKRSHDSDDDEE 132
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.137 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,334,467
Number of Sequences: 59808
Number of extensions: 1650138
Number of successful extensions: 3270
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3248
Number of HSP's gapped (non-prelim): 16
length of query: 1178
length of database: 16,821,457
effective HSP length: 90
effective length of query: 1088
effective length of database: 11,438,737
effective search space: 12445345856
effective search space used: 12445345856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 65 (30.3 bits)
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